Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03271

Experiment: 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03269 and MPMX20_03270 are separated by 239 nucleotidesMPMX20_03270 and MPMX20_03271 are separated by 372 nucleotidesMPMX20_03271 and MPMX20_03272 are separated by 44 nucleotides MPMX20_03269: MPMX20_03269 - 3-ketoacyl-CoA thiolase FadI, at 3,439,952 to 3,441,262 _03269 MPMX20_03270: MPMX20_03270 - hypothetical protein, at 3,441,502 to 3,441,786 _03270 MPMX20_03271: MPMX20_03271 - Long-chain fatty acid transport protein, at 3,442,159 to 3,443,487 _03271 MPMX20_03272: MPMX20_03272 - Intermembrane phospholipid transport system lipoprotein MlaA, at 3,443,532 to 3,444,284 _03272 Position (kb) 3442 3443 3444Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 3441.251 kb on + strandat 3441.258 kb on + strandat 3441.258 kb on + strandat 3441.266 kb on - strandat 3441.266 kb on - strandat 3441.272 kb on - strandat 3441.493 kb on + strandat 3441.503 kb on - strandat 3441.505 kb on + strandat 3441.505 kb on + strandat 3441.505 kb on + strandat 3441.505 kb on + strandat 3441.580 kb on + strand, within MPMX20_03270at 3441.615 kb on + strand, within MPMX20_03270at 3441.620 kb on + strand, within MPMX20_03270at 3441.620 kb on + strand, within MPMX20_03270at 3441.638 kb on + strand, within MPMX20_03270at 3441.666 kb on - strand, within MPMX20_03270at 3441.687 kb on + strand, within MPMX20_03270at 3441.823 kb on - strandat 3441.847 kb on + strandat 3441.866 kb on - strandat 3441.868 kb on + strandat 3442.042 kb on + strandat 3442.042 kb on + strandat 3442.045 kb on - strandat 3442.045 kb on - strandat 3442.050 kb on - strandat 3442.081 kb on + strandat 3442.081 kb on + strandat 3442.087 kb on + strandat 3442.087 kb on + strandat 3442.089 kb on - strandat 3442.095 kb on - strandat 3442.095 kb on - strandat 3442.095 kb on - strandat 3442.095 kb on - strandat 3442.157 kb on - strandat 3442.157 kb on - strandat 3442.202 kb on - strandat 3442.224 kb on + strandat 3442.267 kb on + strandat 3442.267 kb on + strandat 3442.275 kb on - strandat 3442.303 kb on - strand, within MPMX20_03271at 3442.339 kb on - strand, within MPMX20_03271at 3442.484 kb on - strand, within MPMX20_03271at 3442.514 kb on - strand, within MPMX20_03271at 3442.528 kb on - strand, within MPMX20_03271at 3442.544 kb on - strand, within MPMX20_03271at 3442.615 kb on - strand, within MPMX20_03271at 3442.622 kb on - strand, within MPMX20_03271at 3442.631 kb on - strand, within MPMX20_03271at 3442.743 kb on - strand, within MPMX20_03271at 3442.812 kb on + strand, within MPMX20_03271at 3442.812 kb on + strand, within MPMX20_03271at 3442.812 kb on + strand, within MPMX20_03271at 3442.812 kb on + strand, within MPMX20_03271at 3442.812 kb on + strand, within MPMX20_03271at 3442.812 kb on + strand, within MPMX20_03271at 3442.812 kb on + strand, within MPMX20_03271at 3442.812 kb on + strand, within MPMX20_03271at 3442.812 kb on + strand, within MPMX20_03271at 3442.820 kb on - strand, within MPMX20_03271at 3442.820 kb on - strand, within MPMX20_03271at 3442.820 kb on - strand, within MPMX20_03271at 3442.847 kb on + strand, within MPMX20_03271at 3442.855 kb on - strand, within MPMX20_03271at 3442.855 kb on - strand, within MPMX20_03271at 3442.855 kb on - strand, within MPMX20_03271at 3442.944 kb on + strand, within MPMX20_03271at 3442.952 kb on - strand, within MPMX20_03271at 3442.952 kb on - strand, within MPMX20_03271at 3442.966 kb on - strand, within MPMX20_03271at 3442.981 kb on - strand, within MPMX20_03271at 3443.026 kb on - strand, within MPMX20_03271at 3443.086 kb on + strand, within MPMX20_03271at 3443.086 kb on + strand, within MPMX20_03271at 3443.094 kb on - strand, within MPMX20_03271at 3443.094 kb on - strand, within MPMX20_03271at 3443.095 kb on + strand, within MPMX20_03271at 3443.095 kb on + strand, within MPMX20_03271at 3443.100 kb on + strand, within MPMX20_03271at 3443.103 kb on - strand, within MPMX20_03271at 3443.103 kb on - strand, within MPMX20_03271at 3443.103 kb on - strand, within MPMX20_03271at 3443.103 kb on - strand, within MPMX20_03271at 3443.130 kb on + strand, within MPMX20_03271at 3443.208 kb on + strand, within MPMX20_03271at 3443.216 kb on - strand, within MPMX20_03271at 3443.216 kb on - strand, within MPMX20_03271at 3443.216 kb on - strand, within MPMX20_03271at 3443.224 kb on + strand, within MPMX20_03271at 3443.232 kb on + strand, within MPMX20_03271at 3443.259 kb on - strand, within MPMX20_03271at 3443.321 kb on - strand, within MPMX20_03271at 3443.335 kb on + strand, within MPMX20_03271at 3443.338 kb on - strand, within MPMX20_03271at 3443.341 kb on + strand, within MPMX20_03271at 3443.416 kb on - strandat 3443.438 kb on - strandat 3443.438 kb on - strandat 3443.443 kb on + strandat 3443.443 kb on + strandat 3443.443 kb on + strandat 3443.443 kb on + strandat 3443.443 kb on + strandat 3443.444 kb on + strandat 3443.451 kb on - strandat 3443.462 kb on + strandat 3443.497 kb on + strandat 3443.505 kb on - strandat 3443.671 kb on - strand, within MPMX20_03272at 3443.671 kb on - strand, within MPMX20_03272at 3443.721 kb on + strand, within MPMX20_03272at 3443.727 kb on - strand, within MPMX20_03272at 3443.729 kb on - strand, within MPMX20_03272at 3443.771 kb on + strand, within MPMX20_03272at 3444.015 kb on + strand, within MPMX20_03272at 3444.020 kb on + strand, within MPMX20_03272at 3444.020 kb on + strand, within MPMX20_03272at 3444.028 kb on - strand, within MPMX20_03272at 3444.050 kb on + strand, within MPMX20_03272at 3444.165 kb on + strand, within MPMX20_03272at 3444.166 kb on - strand, within MPMX20_03272at 3444.173 kb on - strand, within MPMX20_03272at 3444.173 kb on - strand, within MPMX20_03272at 3444.188 kb on - strand, within MPMX20_03272at 3444.196 kb on + strand, within MPMX20_03272at 3444.204 kb on - strand, within MPMX20_03272at 3444.226 kb on - strandat 3444.226 kb on - strandat 3444.234 kb on + strandat 3444.305 kb on - strandat 3444.333 kb on + strandat 3444.333 kb on - strandat 3444.341 kb on - strandat 3444.404 kb on + strandat 3444.404 kb on + strandat 3444.426 kb on + strandat 3444.431 kb on + strandat 3444.433 kb on + strandat 3444.434 kb on - strandat 3444.436 kb on + strandat 3444.446 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031
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3,441,251 + +0.3
3,441,258 + +0.8
3,441,258 + +1.4
3,441,266 - -2.0
3,441,266 - +0.4
3,441,272 - -0.9
3,441,493 + -0.4
3,441,503 - -1.3
3,441,505 + +3.4
3,441,505 + -1.1
3,441,505 + -1.0
3,441,505 + +0.4
3,441,580 + MPMX20_03270 0.27 -0.2
3,441,615 + MPMX20_03270 0.40 -0.0
3,441,620 + MPMX20_03270 0.41 -0.3
3,441,620 + MPMX20_03270 0.41 +0.8
3,441,638 + MPMX20_03270 0.48 +0.0
3,441,666 - MPMX20_03270 0.58 -0.3
3,441,687 + MPMX20_03270 0.65 +6.3
3,441,823 - +0.0
3,441,847 + +0.4
3,441,866 - -1.8
3,441,868 + +0.6
3,442,042 + -0.0
3,442,042 + +0.2
3,442,045 - +1.4
3,442,045 - -1.0
3,442,050 - +0.0
3,442,081 + +0.2
3,442,081 + -0.6
3,442,087 + -1.5
3,442,087 + -0.5
3,442,089 - +1.4
3,442,095 - +0.8
3,442,095 - -0.4
3,442,095 - -0.7
3,442,095 - +0.0
3,442,157 - +1.0
3,442,157 - -2.0
3,442,202 - +0.0
3,442,224 + -1.7
3,442,267 + +1.0
3,442,267 + -0.8
3,442,275 - -0.7
3,442,303 - MPMX20_03271 0.11 -0.2
3,442,339 - MPMX20_03271 0.14 -0.2
3,442,484 - MPMX20_03271 0.24 -1.2
3,442,514 - MPMX20_03271 0.27 +0.3
3,442,528 - MPMX20_03271 0.28 +0.3
3,442,544 - MPMX20_03271 0.29 -0.4
3,442,615 - MPMX20_03271 0.34 +2.6
3,442,622 - MPMX20_03271 0.35 -1.0
3,442,631 - MPMX20_03271 0.36 +0.4
3,442,743 - MPMX20_03271 0.44 +0.8
3,442,812 + MPMX20_03271 0.49 -0.9
3,442,812 + MPMX20_03271 0.49 -2.2
3,442,812 + MPMX20_03271 0.49 -0.5
3,442,812 + MPMX20_03271 0.49 -0.4
3,442,812 + MPMX20_03271 0.49 -0.9
3,442,812 + MPMX20_03271 0.49 +1.6
3,442,812 + MPMX20_03271 0.49 -1.4
3,442,812 + MPMX20_03271 0.49 -2.2
3,442,812 + MPMX20_03271 0.49 -0.8
3,442,820 - MPMX20_03271 0.50 -0.5
3,442,820 - MPMX20_03271 0.50 +1.3
3,442,820 - MPMX20_03271 0.50 -1.7
3,442,847 + MPMX20_03271 0.52 -1.2
3,442,855 - MPMX20_03271 0.52 -0.0
3,442,855 - MPMX20_03271 0.52 +1.4
3,442,855 - MPMX20_03271 0.52 -1.2
3,442,944 + MPMX20_03271 0.59 +1.6
3,442,952 - MPMX20_03271 0.60 -1.3
3,442,952 - MPMX20_03271 0.60 -1.6
3,442,966 - MPMX20_03271 0.61 -1.9
3,442,981 - MPMX20_03271 0.62 -2.3
3,443,026 - MPMX20_03271 0.65 -1.5
3,443,086 + MPMX20_03271 0.70 +0.5
3,443,086 + MPMX20_03271 0.70 -1.1
3,443,094 - MPMX20_03271 0.70 -2.2
3,443,094 - MPMX20_03271 0.70 -1.9
3,443,095 + MPMX20_03271 0.70 -0.4
3,443,095 + MPMX20_03271 0.70 +0.8
3,443,100 + MPMX20_03271 0.71 -1.9
3,443,103 - MPMX20_03271 0.71 +1.5
3,443,103 - MPMX20_03271 0.71 +0.3
3,443,103 - MPMX20_03271 0.71 -1.9
3,443,103 - MPMX20_03271 0.71 -0.6
3,443,130 + MPMX20_03271 0.73 +0.5
3,443,208 + MPMX20_03271 0.79 +0.8
3,443,216 - MPMX20_03271 0.80 -0.1
3,443,216 - MPMX20_03271 0.80 -1.1
3,443,216 - MPMX20_03271 0.80 +1.5
3,443,224 + MPMX20_03271 0.80 -0.2
3,443,232 + MPMX20_03271 0.81 +0.2
3,443,259 - MPMX20_03271 0.83 -0.3
3,443,321 - MPMX20_03271 0.87 -0.0
3,443,335 + MPMX20_03271 0.88 -0.8
3,443,338 - MPMX20_03271 0.89 +0.6
3,443,341 + MPMX20_03271 0.89 +0.6
3,443,416 - +0.0
3,443,438 - -1.3
3,443,438 - -0.2
3,443,443 + -1.9
3,443,443 + -0.2
3,443,443 + -1.5
3,443,443 + +0.8
3,443,443 + -1.0
3,443,444 + -0.2
3,443,451 - +0.5
3,443,462 + +0.5
3,443,497 + +3.4
3,443,505 - +1.1
3,443,671 - MPMX20_03272 0.18 -0.4
3,443,671 - MPMX20_03272 0.18 -2.0
3,443,721 + MPMX20_03272 0.25 -0.2
3,443,727 - MPMX20_03272 0.26 -0.4
3,443,729 - MPMX20_03272 0.26 -0.2
3,443,771 + MPMX20_03272 0.32 -1.5
3,444,015 + MPMX20_03272 0.64 +1.4
3,444,020 + MPMX20_03272 0.65 +0.8
3,444,020 + MPMX20_03272 0.65 +0.4
3,444,028 - MPMX20_03272 0.66 +0.4
3,444,050 + MPMX20_03272 0.69 +0.0
3,444,165 + MPMX20_03272 0.84 -0.4
3,444,166 - MPMX20_03272 0.84 -1.9
3,444,173 - MPMX20_03272 0.85 +0.3
3,444,173 - MPMX20_03272 0.85 +0.0
3,444,188 - MPMX20_03272 0.87 -1.5
3,444,196 + MPMX20_03272 0.88 -0.7
3,444,204 - MPMX20_03272 0.89 -2.5
3,444,226 - -0.7
3,444,226 - -0.7
3,444,234 + -0.3
3,444,305 - -2.0
3,444,333 + +0.5
3,444,333 - +0.0
3,444,341 - +0.0
3,444,404 + +2.0
3,444,404 + +0.6
3,444,426 + +0.3
3,444,431 + +0.2
3,444,433 + -2.0
3,444,434 - -0.8
3,444,436 + -1.9
3,444,446 - +0.0

Or see this region's nucleotide sequence