Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01389

Experiment: 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01387 and MPMX20_01388 are separated by 67 nucleotidesMPMX20_01388 and MPMX20_01389 are separated by 127 nucleotidesMPMX20_01389 and MPMX20_01390 are separated by 180 nucleotidesMPMX20_01390 and MPMX20_01391 overlap by 1 nucleotides MPMX20_01387: MPMX20_01387 - ABC transporter ATP-binding protein ModF, at 1,449,552 to 1,451,024 _01387 MPMX20_01388: MPMX20_01388 - DNA-binding transcriptional dual regulator ModE, at 1,451,092 to 1,451,880 _01388 MPMX20_01389: MPMX20_01389 - Multidrug efflux pump accessory protein AcrZ, at 1,452,008 to 1,452,157 _01389 MPMX20_01390: MPMX20_01390 - Molybdate-binding protein ModA, at 1,452,338 to 1,453,111 _01390 MPMX20_01391: MPMX20_01391 - Molybdenum transport system permease protein ModB, at 1,453,111 to 1,453,800 _01391 Position (kb) 1452 1453Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 1451.068 kb on - strandat 1451.090 kb on + strandat 1451.093 kb on + strandat 1451.181 kb on - strand, within MPMX20_01388at 1451.184 kb on + strand, within MPMX20_01388at 1451.186 kb on - strand, within MPMX20_01388at 1451.196 kb on + strand, within MPMX20_01388at 1451.196 kb on + strand, within MPMX20_01388at 1451.204 kb on - strand, within MPMX20_01388at 1451.204 kb on - strand, within MPMX20_01388at 1451.204 kb on - strand, within MPMX20_01388at 1451.204 kb on - strand, within MPMX20_01388at 1451.204 kb on - strand, within MPMX20_01388at 1451.218 kb on + strand, within MPMX20_01388at 1451.223 kb on + strand, within MPMX20_01388at 1451.235 kb on + strand, within MPMX20_01388at 1451.243 kb on - strand, within MPMX20_01388at 1451.243 kb on - strand, within MPMX20_01388at 1451.243 kb on - strand, within MPMX20_01388at 1451.243 kb on - strand, within MPMX20_01388at 1451.315 kb on + strand, within MPMX20_01388at 1451.357 kb on + strand, within MPMX20_01388at 1451.459 kb on - strand, within MPMX20_01388at 1451.620 kb on - strand, within MPMX20_01388at 1451.639 kb on - strand, within MPMX20_01388at 1451.649 kb on + strand, within MPMX20_01388at 1451.703 kb on + strand, within MPMX20_01388at 1451.703 kb on + strand, within MPMX20_01388at 1451.761 kb on + strand, within MPMX20_01388at 1451.761 kb on + strand, within MPMX20_01388at 1451.839 kb on - strandat 1451.850 kb on + strandat 1451.850 kb on + strandat 1451.850 kb on + strandat 1451.877 kb on + strandat 1451.877 kb on + strandat 1451.877 kb on + strandat 1451.877 kb on + strandat 1451.885 kb on - strandat 1451.885 kb on - strandat 1451.885 kb on - strandat 1451.885 kb on - strandat 1451.885 kb on - strandat 1451.885 kb on - strandat 1451.885 kb on - strandat 1451.885 kb on - strandat 1451.885 kb on - strandat 1451.918 kb on + strandat 1451.933 kb on + strandat 1451.976 kb on + strandat 1451.976 kb on + strandat 1451.984 kb on - strandat 1451.984 kb on - strandat 1452.054 kb on + strand, within MPMX20_01389at 1452.066 kb on + strand, within MPMX20_01389at 1452.066 kb on + strand, within MPMX20_01389at 1452.134 kb on + strand, within MPMX20_01389at 1452.142 kb on - strand, within MPMX20_01389at 1452.142 kb on - strand, within MPMX20_01389at 1452.172 kb on + strandat 1452.244 kb on + strandat 1452.244 kb on + strandat 1452.244 kb on + strandat 1452.244 kb on + strandat 1452.274 kb on - strandat 1452.345 kb on + strandat 1452.353 kb on - strandat 1452.353 kb on - strandat 1452.353 kb on - strandat 1452.383 kb on + strandat 1452.409 kb on - strandat 1452.409 kb on - strandat 1452.414 kb on - strandat 1452.414 kb on - strandat 1452.458 kb on + strand, within MPMX20_01390at 1452.463 kb on + strand, within MPMX20_01390at 1452.488 kb on - strand, within MPMX20_01390at 1452.503 kb on - strand, within MPMX20_01390at 1452.579 kb on - strand, within MPMX20_01390at 1452.584 kb on + strand, within MPMX20_01390at 1452.722 kb on + strand, within MPMX20_01390at 1452.730 kb on - strand, within MPMX20_01390at 1452.765 kb on + strand, within MPMX20_01390at 1452.787 kb on + strand, within MPMX20_01390at 1452.787 kb on + strand, within MPMX20_01390at 1452.795 kb on - strand, within MPMX20_01390at 1452.831 kb on + strand, within MPMX20_01390at 1452.851 kb on - strand, within MPMX20_01390at 1452.872 kb on + strand, within MPMX20_01390at 1452.891 kb on - strand, within MPMX20_01390at 1452.946 kb on + strand, within MPMX20_01390at 1452.989 kb on + strand, within MPMX20_01390at 1453.054 kb on + strandat 1453.055 kb on - strandat 1453.062 kb on - strandat 1453.070 kb on - strandat 1453.089 kb on - strandat 1453.141 kb on + strandat 1453.141 kb on + strandat 1453.141 kb on + strandat 1453.141 kb on + strandat 1453.141 kb on + strandat 1453.149 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031
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1,451,068 - +0.0
1,451,090 + +3.9
1,451,093 + -0.8
1,451,181 - MPMX20_01388 0.11 -0.5
1,451,184 + MPMX20_01388 0.12 -0.0
1,451,186 - MPMX20_01388 0.12 -0.9
1,451,196 + MPMX20_01388 0.13 -1.4
1,451,196 + MPMX20_01388 0.13 -1.2
1,451,204 - MPMX20_01388 0.14 +2.3
1,451,204 - MPMX20_01388 0.14 +0.2
1,451,204 - MPMX20_01388 0.14 -0.5
1,451,204 - MPMX20_01388 0.14 -1.1
1,451,204 - MPMX20_01388 0.14 -0.2
1,451,218 + MPMX20_01388 0.16 -0.7
1,451,223 + MPMX20_01388 0.17 +0.0
1,451,235 + MPMX20_01388 0.18 +0.2
1,451,243 - MPMX20_01388 0.19 -0.3
1,451,243 - MPMX20_01388 0.19 +0.1
1,451,243 - MPMX20_01388 0.19 -1.4
1,451,243 - MPMX20_01388 0.19 -0.7
1,451,315 + MPMX20_01388 0.28 +2.3
1,451,357 + MPMX20_01388 0.34 +2.3
1,451,459 - MPMX20_01388 0.47 -0.7
1,451,620 - MPMX20_01388 0.67 +0.4
1,451,639 - MPMX20_01388 0.69 -0.6
1,451,649 + MPMX20_01388 0.71 +0.8
1,451,703 + MPMX20_01388 0.77 +1.3
1,451,703 + MPMX20_01388 0.77 +0.6
1,451,761 + MPMX20_01388 0.85 -0.8
1,451,761 + MPMX20_01388 0.85 -1.2
1,451,839 - -2.4
1,451,850 + -0.8
1,451,850 + -0.2
1,451,850 + +0.5
1,451,877 + +2.5
1,451,877 + +2.1
1,451,877 + +2.3
1,451,877 + -1.7
1,451,885 - -0.9
1,451,885 - -0.2
1,451,885 - +0.8
1,451,885 - -0.1
1,451,885 - +1.1
1,451,885 - -0.1
1,451,885 - +0.3
1,451,885 - +0.9
1,451,885 - -0.1
1,451,918 + +0.4
1,451,933 + +0.3
1,451,976 + +0.8
1,451,976 + +1.0
1,451,984 - -0.7
1,451,984 - -0.7
1,452,054 + MPMX20_01389 0.31 +0.6
1,452,066 + MPMX20_01389 0.39 -0.5
1,452,066 + MPMX20_01389 0.39 -0.1
1,452,134 + MPMX20_01389 0.84 +1.0
1,452,142 - MPMX20_01389 0.89 -1.7
1,452,142 - MPMX20_01389 0.89 +0.5
1,452,172 + +2.3
1,452,244 + +0.9
1,452,244 + +0.3
1,452,244 + -1.2
1,452,244 + -0.8
1,452,274 - -1.0
1,452,345 + -1.7
1,452,353 - -0.2
1,452,353 - +0.0
1,452,353 - -1.2
1,452,383 + -1.7
1,452,409 - -0.1
1,452,409 - -0.3
1,452,414 - -2.1
1,452,414 - +0.8
1,452,458 + MPMX20_01390 0.16 -0.6
1,452,463 + MPMX20_01390 0.16 +0.1
1,452,488 - MPMX20_01390 0.19 +0.2
1,452,503 - MPMX20_01390 0.21 +0.1
1,452,579 - MPMX20_01390 0.31 -0.2
1,452,584 + MPMX20_01390 0.32 +0.3
1,452,722 + MPMX20_01390 0.50 -0.3
1,452,730 - MPMX20_01390 0.51 +0.2
1,452,765 + MPMX20_01390 0.55 +0.9
1,452,787 + MPMX20_01390 0.58 -0.5
1,452,787 + MPMX20_01390 0.58 +0.3
1,452,795 - MPMX20_01390 0.59 -0.7
1,452,831 + MPMX20_01390 0.64 -0.2
1,452,851 - MPMX20_01390 0.66 +0.3
1,452,872 + MPMX20_01390 0.69 +0.2
1,452,891 - MPMX20_01390 0.71 -1.1
1,452,946 + MPMX20_01390 0.79 +1.0
1,452,989 + MPMX20_01390 0.84 -0.2
1,453,054 + -0.4
1,453,055 - -0.7
1,453,062 - +0.8
1,453,070 - +4.7
1,453,089 - +0.3
1,453,141 + -1.5
1,453,141 + -0.5
1,453,141 + -1.0
1,453,141 + +0.2
1,453,141 + +0.3
1,453,149 - +0.2

Or see this region's nucleotide sequence