Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00991

Experiment: 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00990 and MPMX20_00991 are separated by 200 nucleotidesMPMX20_00991 and MPMX20_00992 are separated by 48 nucleotidesMPMX20_00992 and MPMX20_00993 are separated by 21 nucleotides MPMX20_00990: MPMX20_00990 - Maltodextrin glucosidase, at 1,043,497 to 1,045,314 _00990 MPMX20_00991: MPMX20_00991 - hypothetical protein, at 1,045,515 to 1,046,156 _00991 MPMX20_00992: MPMX20_00992 - hypothetical protein, at 1,046,205 to 1,046,750 _00992 MPMX20_00993: MPMX20_00993 - N-substituted formamide deformylase, at 1,046,772 to 1,048,640 _00993 Position (kb) 1045 1046 1047Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1044.591 kb on + strand, within MPMX20_00990at 1044.599 kb on - strand, within MPMX20_00990at 1044.772 kb on + strand, within MPMX20_00990at 1044.780 kb on - strand, within MPMX20_00990at 1044.781 kb on + strand, within MPMX20_00990at 1044.823 kb on - strand, within MPMX20_00990at 1044.823 kb on - strand, within MPMX20_00990at 1044.879 kb on - strand, within MPMX20_00990at 1044.893 kb on + strand, within MPMX20_00990at 1045.026 kb on + strand, within MPMX20_00990at 1045.029 kb on - strand, within MPMX20_00990at 1045.031 kb on + strand, within MPMX20_00990at 1045.031 kb on + strand, within MPMX20_00990at 1045.035 kb on + strand, within MPMX20_00990at 1045.039 kb on - strand, within MPMX20_00990at 1045.065 kb on + strand, within MPMX20_00990at 1045.085 kb on - strand, within MPMX20_00990at 1045.107 kb on - strand, within MPMX20_00990at 1045.136 kb on + strandat 1045.170 kb on + strandat 1045.215 kb on - strandat 1045.242 kb on + strandat 1045.242 kb on + strandat 1045.249 kb on + strandat 1045.250 kb on - strandat 1045.267 kb on + strandat 1045.294 kb on + strandat 1045.315 kb on - strandat 1045.374 kb on + strandat 1045.437 kb on - strandat 1045.469 kb on - strandat 1045.538 kb on - strandat 1045.541 kb on + strandat 1045.541 kb on + strandat 1045.541 kb on + strandat 1045.541 kb on + strandat 1045.541 kb on + strandat 1045.541 kb on + strandat 1045.541 kb on + strandat 1045.549 kb on - strandat 1045.549 kb on - strandat 1045.648 kb on - strand, within MPMX20_00991at 1045.674 kb on + strand, within MPMX20_00991at 1045.674 kb on + strand, within MPMX20_00991at 1045.682 kb on - strand, within MPMX20_00991at 1045.682 kb on - strand, within MPMX20_00991at 1045.682 kb on - strand, within MPMX20_00991at 1045.682 kb on - strand, within MPMX20_00991at 1045.682 kb on - strand, within MPMX20_00991at 1045.683 kb on - strand, within MPMX20_00991at 1045.684 kb on - strand, within MPMX20_00991at 1045.689 kb on - strand, within MPMX20_00991at 1045.712 kb on + strand, within MPMX20_00991at 1045.712 kb on + strand, within MPMX20_00991at 1045.715 kb on - strand, within MPMX20_00991at 1045.720 kb on - strand, within MPMX20_00991at 1045.745 kb on + strand, within MPMX20_00991at 1045.762 kb on - strand, within MPMX20_00991at 1045.771 kb on - strand, within MPMX20_00991at 1045.773 kb on - strand, within MPMX20_00991at 1045.775 kb on + strand, within MPMX20_00991at 1045.868 kb on - strand, within MPMX20_00991at 1045.898 kb on - strand, within MPMX20_00991at 1045.898 kb on - strand, within MPMX20_00991at 1045.974 kb on + strand, within MPMX20_00991at 1046.002 kb on + strand, within MPMX20_00991at 1046.061 kb on + strand, within MPMX20_00991at 1046.069 kb on - strand, within MPMX20_00991at 1046.069 kb on - strand, within MPMX20_00991at 1046.075 kb on - strand, within MPMX20_00991at 1046.081 kb on + strand, within MPMX20_00991at 1046.081 kb on + strand, within MPMX20_00991at 1046.086 kb on + strand, within MPMX20_00991at 1046.097 kb on + strandat 1046.115 kb on + strandat 1046.115 kb on + strandat 1046.123 kb on - strandat 1046.123 kb on - strandat 1046.123 kb on - strandat 1046.123 kb on - strandat 1046.123 kb on - strandat 1046.151 kb on + strandat 1046.159 kb on - strandat 1046.200 kb on - strandat 1046.323 kb on + strand, within MPMX20_00992at 1046.324 kb on + strand, within MPMX20_00992at 1046.334 kb on + strand, within MPMX20_00992at 1046.356 kb on + strand, within MPMX20_00992at 1046.400 kb on - strand, within MPMX20_00992at 1046.428 kb on + strand, within MPMX20_00992at 1046.428 kb on + strand, within MPMX20_00992at 1046.534 kb on + strand, within MPMX20_00992at 1046.539 kb on + strand, within MPMX20_00992at 1046.547 kb on - strand, within MPMX20_00992at 1046.547 kb on - strand, within MPMX20_00992at 1046.573 kb on + strand, within MPMX20_00992at 1046.590 kb on + strand, within MPMX20_00992at 1046.598 kb on - strand, within MPMX20_00992at 1046.604 kb on - strand, within MPMX20_00992at 1046.609 kb on + strand, within MPMX20_00992at 1046.631 kb on + strand, within MPMX20_00992at 1046.660 kb on + strand, within MPMX20_00992at 1046.721 kb on - strandat 1046.763 kb on - strandat 1046.792 kb on + strandat 1046.818 kb on - strandat 1046.870 kb on + strandat 1046.964 kb on - strand, within MPMX20_00993at 1047.018 kb on - strand, within MPMX20_00993at 1047.087 kb on + strand, within MPMX20_00993at 1047.087 kb on + strand, within MPMX20_00993at 1047.087 kb on - strand, within MPMX20_00993at 1047.094 kb on - strand, within MPMX20_00993

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031
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1,044,591 + MPMX20_00990 0.60 -0.9
1,044,599 - MPMX20_00990 0.61 -0.0
1,044,772 + MPMX20_00990 0.70 +0.7
1,044,780 - MPMX20_00990 0.71 -0.7
1,044,781 + MPMX20_00990 0.71 -0.6
1,044,823 - MPMX20_00990 0.73 -0.3
1,044,823 - MPMX20_00990 0.73 +0.5
1,044,879 - MPMX20_00990 0.76 -0.1
1,044,893 + MPMX20_00990 0.77 -1.6
1,045,026 + MPMX20_00990 0.84 -0.5
1,045,029 - MPMX20_00990 0.84 -0.1
1,045,031 + MPMX20_00990 0.84 +0.2
1,045,031 + MPMX20_00990 0.84 -1.4
1,045,035 + MPMX20_00990 0.85 +0.1
1,045,039 - MPMX20_00990 0.85 +0.3
1,045,065 + MPMX20_00990 0.86 -0.3
1,045,085 - MPMX20_00990 0.87 -1.6
1,045,107 - MPMX20_00990 0.89 +0.0
1,045,136 + -0.7
1,045,170 + -0.6
1,045,215 - +1.8
1,045,242 + +0.2
1,045,242 + +1.0
1,045,249 + -0.7
1,045,250 - +2.3
1,045,267 + -0.1
1,045,294 + +0.9
1,045,315 - -2.6
1,045,374 + +0.8
1,045,437 - -0.3
1,045,469 - +0.6
1,045,538 - -0.1
1,045,541 + +0.3
1,045,541 + +0.3
1,045,541 + -0.9
1,045,541 + -0.2
1,045,541 + -1.0
1,045,541 + -0.2
1,045,541 + -0.9
1,045,549 - -1.0
1,045,549 - +0.9
1,045,648 - MPMX20_00991 0.21 +0.0
1,045,674 + MPMX20_00991 0.25 -0.6
1,045,674 + MPMX20_00991 0.25 -0.4
1,045,682 - MPMX20_00991 0.26 -0.3
1,045,682 - MPMX20_00991 0.26 +0.4
1,045,682 - MPMX20_00991 0.26 +1.3
1,045,682 - MPMX20_00991 0.26 -0.6
1,045,682 - MPMX20_00991 0.26 -1.5
1,045,683 - MPMX20_00991 0.26 -1.4
1,045,684 - MPMX20_00991 0.26 +0.5
1,045,689 - MPMX20_00991 0.27 +2.3
1,045,712 + MPMX20_00991 0.31 -0.8
1,045,712 + MPMX20_00991 0.31 +0.7
1,045,715 - MPMX20_00991 0.31 -0.3
1,045,720 - MPMX20_00991 0.32 -0.6
1,045,745 + MPMX20_00991 0.36 +2.0
1,045,762 - MPMX20_00991 0.38 +0.6
1,045,771 - MPMX20_00991 0.40 -0.5
1,045,773 - MPMX20_00991 0.40 +0.9
1,045,775 + MPMX20_00991 0.40 +2.3
1,045,868 - MPMX20_00991 0.55 -0.3
1,045,898 - MPMX20_00991 0.60 -0.7
1,045,898 - MPMX20_00991 0.60 -0.9
1,045,974 + MPMX20_00991 0.71 +0.8
1,046,002 + MPMX20_00991 0.76 -0.8
1,046,061 + MPMX20_00991 0.85 -1.8
1,046,069 - MPMX20_00991 0.86 +0.2
1,046,069 - MPMX20_00991 0.86 +0.9
1,046,075 - MPMX20_00991 0.87 -0.6
1,046,081 + MPMX20_00991 0.88 -0.7
1,046,081 + MPMX20_00991 0.88 -0.6
1,046,086 + MPMX20_00991 0.89 -1.2
1,046,097 + -2.3
1,046,115 + -2.0
1,046,115 + -0.9
1,046,123 - +0.9
1,046,123 - -0.3
1,046,123 - +0.7
1,046,123 - +1.9
1,046,123 - +1.1
1,046,151 + -1.1
1,046,159 - -0.2
1,046,200 - +0.9
1,046,323 + MPMX20_00992 0.22 -0.5
1,046,324 + MPMX20_00992 0.22 -1.7
1,046,334 + MPMX20_00992 0.24 +2.2
1,046,356 + MPMX20_00992 0.28 -1.8
1,046,400 - MPMX20_00992 0.36 -0.3
1,046,428 + MPMX20_00992 0.41 -0.3
1,046,428 + MPMX20_00992 0.41 +0.2
1,046,534 + MPMX20_00992 0.60 +1.0
1,046,539 + MPMX20_00992 0.61 +3.2
1,046,547 - MPMX20_00992 0.63 -0.3
1,046,547 - MPMX20_00992 0.63 -1.5
1,046,573 + MPMX20_00992 0.67 +0.2
1,046,590 + MPMX20_00992 0.71 -0.1
1,046,598 - MPMX20_00992 0.72 -0.3
1,046,604 - MPMX20_00992 0.73 -1.9
1,046,609 + MPMX20_00992 0.74 +0.7
1,046,631 + MPMX20_00992 0.78 -0.6
1,046,660 + MPMX20_00992 0.83 +1.8
1,046,721 - -0.5
1,046,763 - -1.1
1,046,792 + -0.8
1,046,818 - -2.2
1,046,870 + +0.6
1,046,964 - MPMX20_00993 0.10 +0.4
1,047,018 - MPMX20_00993 0.13 -1.8
1,047,087 + MPMX20_00993 0.17 -0.9
1,047,087 + MPMX20_00993 0.17 +0.0
1,047,087 - MPMX20_00993 0.17 +0.2
1,047,094 - MPMX20_00993 0.17 -1.1

Or see this region's nucleotide sequence