Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00451

Experiment: 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00450 and MPMX20_00451 are separated by 9 nucleotidesMPMX20_00451 and MPMX20_00452 overlap by 8 nucleotides MPMX20_00450: MPMX20_00450 - N-acetylmuramoyl-L-alanine amidase AmiB, at 463,835 to 465,247 _00450 MPMX20_00451: MPMX20_00451 - DNA mismatch repair protein MutL, at 465,257 to 467,101 _00451 MPMX20_00452: MPMX20_00452 - tRNA dimethylallyltransferase, at 467,094 to 468,044 _00452 Position (kb) 465 466 467 468Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 464.347 kb on + strand, within MPMX20_00450at 464.347 kb on + strand, within MPMX20_00450at 464.347 kb on + strand, within MPMX20_00450at 464.348 kb on + strand, within MPMX20_00450at 464.364 kb on + strand, within MPMX20_00450at 464.433 kb on - strand, within MPMX20_00450at 464.594 kb on + strand, within MPMX20_00450at 464.596 kb on + strand, within MPMX20_00450at 464.604 kb on - strand, within MPMX20_00450at 464.622 kb on - strand, within MPMX20_00450at 464.675 kb on - strand, within MPMX20_00450at 464.680 kb on - strand, within MPMX20_00450at 464.734 kb on + strand, within MPMX20_00450at 464.748 kb on - strand, within MPMX20_00450at 464.750 kb on + strand, within MPMX20_00450at 464.764 kb on - strand, within MPMX20_00450at 464.802 kb on + strand, within MPMX20_00450at 464.802 kb on + strand, within MPMX20_00450at 464.810 kb on - strand, within MPMX20_00450at 464.831 kb on + strand, within MPMX20_00450at 464.831 kb on + strand, within MPMX20_00450at 464.839 kb on - strand, within MPMX20_00450at 464.839 kb on - strand, within MPMX20_00450at 464.962 kb on + strand, within MPMX20_00450at 464.999 kb on + strand, within MPMX20_00450at 465.016 kb on - strand, within MPMX20_00450at 465.133 kb on + strandat 465.141 kb on - strandat 465.187 kb on + strandat 465.190 kb on - strandat 465.195 kb on - strandat 465.210 kb on + strandat 465.224 kb on + strandat 465.303 kb on + strandat 465.334 kb on + strandat 465.335 kb on - strandat 465.357 kb on + strandat 465.405 kb on + strandat 465.413 kb on - strandat 465.413 kb on - strandat 465.476 kb on + strand, within MPMX20_00451at 465.511 kb on + strand, within MPMX20_00451at 465.597 kb on + strand, within MPMX20_00451at 465.597 kb on - strand, within MPMX20_00451at 465.605 kb on - strand, within MPMX20_00451at 465.622 kb on + strand, within MPMX20_00451at 465.622 kb on + strand, within MPMX20_00451at 465.622 kb on + strand, within MPMX20_00451at 465.623 kb on - strand, within MPMX20_00451at 465.630 kb on - strand, within MPMX20_00451at 465.644 kb on - strand, within MPMX20_00451at 465.650 kb on - strand, within MPMX20_00451at 465.689 kb on - strand, within MPMX20_00451at 465.689 kb on - strand, within MPMX20_00451at 465.791 kb on + strand, within MPMX20_00451at 465.799 kb on - strand, within MPMX20_00451at 465.799 kb on - strand, within MPMX20_00451at 465.801 kb on + strand, within MPMX20_00451at 465.813 kb on + strand, within MPMX20_00451at 465.813 kb on + strand, within MPMX20_00451at 465.813 kb on + strand, within MPMX20_00451at 465.813 kb on + strand, within MPMX20_00451at 465.821 kb on - strand, within MPMX20_00451at 465.839 kb on + strand, within MPMX20_00451at 465.840 kb on - strand, within MPMX20_00451at 465.862 kb on + strand, within MPMX20_00451at 465.929 kb on - strand, within MPMX20_00451at 465.985 kb on - strand, within MPMX20_00451at 466.035 kb on + strand, within MPMX20_00451at 466.081 kb on - strand, within MPMX20_00451at 466.081 kb on - strand, within MPMX20_00451at 466.111 kb on - strand, within MPMX20_00451at 466.233 kb on + strand, within MPMX20_00451at 466.263 kb on - strand, within MPMX20_00451at 466.393 kb on + strand, within MPMX20_00451at 466.393 kb on + strand, within MPMX20_00451at 466.396 kb on - strand, within MPMX20_00451at 466.446 kb on + strand, within MPMX20_00451at 466.556 kb on - strand, within MPMX20_00451at 466.605 kb on - strand, within MPMX20_00451at 466.621 kb on + strand, within MPMX20_00451at 466.674 kb on - strand, within MPMX20_00451at 466.700 kb on - strand, within MPMX20_00451at 466.829 kb on + strand, within MPMX20_00451at 466.831 kb on + strand, within MPMX20_00451at 466.839 kb on - strand, within MPMX20_00451at 466.839 kb on - strand, within MPMX20_00451at 466.887 kb on + strand, within MPMX20_00451at 466.989 kb on - strandat 466.991 kb on - strandat 467.004 kb on - strandat 467.034 kb on - strandat 467.034 kb on - strandat 467.034 kb on - strandat 467.106 kb on + strandat 467.159 kb on - strandat 467.202 kb on + strand, within MPMX20_00452at 467.226 kb on - strand, within MPMX20_00452at 467.231 kb on - strand, within MPMX20_00452at 467.279 kb on - strand, within MPMX20_00452at 467.324 kb on + strand, within MPMX20_00452at 467.324 kb on + strand, within MPMX20_00452at 467.324 kb on + strand, within MPMX20_00452at 467.330 kb on + strand, within MPMX20_00452at 467.332 kb on - strand, within MPMX20_00452at 467.389 kb on + strand, within MPMX20_00452at 467.407 kb on - strand, within MPMX20_00452at 467.447 kb on + strand, within MPMX20_00452at 467.447 kb on + strand, within MPMX20_00452at 467.467 kb on - strand, within MPMX20_00452at 467.508 kb on + strand, within MPMX20_00452at 467.516 kb on - strand, within MPMX20_00452at 467.516 kb on - strand, within MPMX20_00452at 467.540 kb on + strand, within MPMX20_00452at 467.545 kb on + strand, within MPMX20_00452at 467.565 kb on + strand, within MPMX20_00452at 467.573 kb on - strand, within MPMX20_00452at 467.573 kb on - strand, within MPMX20_00452at 467.656 kb on + strand, within MPMX20_00452at 467.710 kb on + strand, within MPMX20_00452at 467.710 kb on + strand, within MPMX20_00452at 467.710 kb on + strand, within MPMX20_00452at 467.710 kb on + strand, within MPMX20_00452at 467.718 kb on - strand, within MPMX20_00452at 467.798 kb on - strand, within MPMX20_00452at 467.800 kb on + strand, within MPMX20_00452at 467.836 kb on + strand, within MPMX20_00452at 467.847 kb on + strand, within MPMX20_00452at 467.860 kb on - strand, within MPMX20_00452at 467.923 kb on + strand, within MPMX20_00452at 467.939 kb on + strand, within MPMX20_00452at 467.965 kb on + strandat 467.967 kb on + strandat 467.967 kb on + strandat 468.047 kb on + strandat 468.047 kb on + strandat 468.047 kb on - strandat 468.060 kb on - strandat 468.092 kb on + strandat 468.092 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031
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464,347 + MPMX20_00450 0.36 -0.1
464,347 + MPMX20_00450 0.36 -0.2
464,347 + MPMX20_00450 0.36 -1.0
464,348 + MPMX20_00450 0.36 +4.1
464,364 + MPMX20_00450 0.37 +0.3
464,433 - MPMX20_00450 0.42 +1.3
464,594 + MPMX20_00450 0.54 -0.4
464,596 + MPMX20_00450 0.54 -0.2
464,604 - MPMX20_00450 0.54 -0.3
464,622 - MPMX20_00450 0.56 +1.2
464,675 - MPMX20_00450 0.59 +2.9
464,680 - MPMX20_00450 0.60 +0.5
464,734 + MPMX20_00450 0.64 +1.5
464,748 - MPMX20_00450 0.65 +1.6
464,750 + MPMX20_00450 0.65 +3.1
464,764 - MPMX20_00450 0.66 -0.9
464,802 + MPMX20_00450 0.68 +0.1
464,802 + MPMX20_00450 0.68 -0.1
464,810 - MPMX20_00450 0.69 +1.0
464,831 + MPMX20_00450 0.70 -0.2
464,831 + MPMX20_00450 0.70 +0.8
464,839 - MPMX20_00450 0.71 -0.2
464,839 - MPMX20_00450 0.71 -0.3
464,962 + MPMX20_00450 0.80 +0.6
464,999 + MPMX20_00450 0.82 -1.6
465,016 - MPMX20_00450 0.84 -0.1
465,133 + +0.7
465,141 - -0.2
465,187 + +1.1
465,190 - +1.3
465,195 - -0.5
465,210 + +0.5
465,224 + +0.6
465,303 + -0.2
465,334 + -1.0
465,335 - +1.2
465,357 + +0.2
465,405 + -0.7
465,413 - +1.5
465,413 - +1.3
465,476 + MPMX20_00451 0.12 -1.2
465,511 + MPMX20_00451 0.14 -1.4
465,597 + MPMX20_00451 0.18 +0.7
465,597 - MPMX20_00451 0.18 -1.6
465,605 - MPMX20_00451 0.19 -2.2
465,622 + MPMX20_00451 0.20 -0.3
465,622 + MPMX20_00451 0.20 -1.3
465,622 + MPMX20_00451 0.20 -1.3
465,623 - MPMX20_00451 0.20 -0.7
465,630 - MPMX20_00451 0.20 -1.1
465,644 - MPMX20_00451 0.21 -1.2
465,650 - MPMX20_00451 0.21 +0.5
465,689 - MPMX20_00451 0.23 -1.4
465,689 - MPMX20_00451 0.23 +1.1
465,791 + MPMX20_00451 0.29 -1.3
465,799 - MPMX20_00451 0.29 -1.2
465,799 - MPMX20_00451 0.29 +0.5
465,801 + MPMX20_00451 0.29 -0.9
465,813 + MPMX20_00451 0.30 +0.5
465,813 + MPMX20_00451 0.30 -0.1
465,813 + MPMX20_00451 0.30 +0.9
465,813 + MPMX20_00451 0.30 -1.9
465,821 - MPMX20_00451 0.31 +0.2
465,839 + MPMX20_00451 0.32 -0.8
465,840 - MPMX20_00451 0.32 -0.1
465,862 + MPMX20_00451 0.33 -0.6
465,929 - MPMX20_00451 0.36 +0.3
465,985 - MPMX20_00451 0.39 -1.0
466,035 + MPMX20_00451 0.42 +0.9
466,081 - MPMX20_00451 0.45 -0.0
466,081 - MPMX20_00451 0.45 -0.3
466,111 - MPMX20_00451 0.46 -0.9
466,233 + MPMX20_00451 0.53 -0.2
466,263 - MPMX20_00451 0.55 -1.2
466,393 + MPMX20_00451 0.62 -0.4
466,393 + MPMX20_00451 0.62 -0.6
466,396 - MPMX20_00451 0.62 -0.7
466,446 + MPMX20_00451 0.64 +0.1
466,556 - MPMX20_00451 0.70 -1.6
466,605 - MPMX20_00451 0.73 -1.8
466,621 + MPMX20_00451 0.74 -0.6
466,674 - MPMX20_00451 0.77 +0.1
466,700 - MPMX20_00451 0.78 -1.6
466,829 + MPMX20_00451 0.85 -0.7
466,831 + MPMX20_00451 0.85 +2.1
466,839 - MPMX20_00451 0.86 -1.2
466,839 - MPMX20_00451 0.86 -0.6
466,887 + MPMX20_00451 0.88 -1.1
466,989 - -0.0
466,991 - -0.4
467,004 - +1.3
467,034 - -0.9
467,034 - -0.2
467,034 - -2.2
467,106 + +0.4
467,159 - -2.3
467,202 + MPMX20_00452 0.11 -1.7
467,226 - MPMX20_00452 0.14 -0.9
467,231 - MPMX20_00452 0.14 -1.7
467,279 - MPMX20_00452 0.19 +1.1
467,324 + MPMX20_00452 0.24 -2.2
467,324 + MPMX20_00452 0.24 +0.7
467,324 + MPMX20_00452 0.24 -2.2
467,330 + MPMX20_00452 0.25 +0.5
467,332 - MPMX20_00452 0.25 -0.5
467,389 + MPMX20_00452 0.31 +2.1
467,407 - MPMX20_00452 0.33 +3.1
467,447 + MPMX20_00452 0.37 -2.4
467,447 + MPMX20_00452 0.37 -2.2
467,467 - MPMX20_00452 0.39 -0.1
467,508 + MPMX20_00452 0.44 +0.1
467,516 - MPMX20_00452 0.44 +0.3
467,516 - MPMX20_00452 0.44 -0.5
467,540 + MPMX20_00452 0.47 -0.8
467,545 + MPMX20_00452 0.47 +0.1
467,565 + MPMX20_00452 0.50 -0.1
467,573 - MPMX20_00452 0.50 -0.2
467,573 - MPMX20_00452 0.50 -0.2
467,656 + MPMX20_00452 0.59 -1.3
467,710 + MPMX20_00452 0.65 -3.9
467,710 + MPMX20_00452 0.65 -1.0
467,710 + MPMX20_00452 0.65 -2.1
467,710 + MPMX20_00452 0.65 -0.5
467,718 - MPMX20_00452 0.66 +1.1
467,798 - MPMX20_00452 0.74 +0.5
467,800 + MPMX20_00452 0.74 -0.7
467,836 + MPMX20_00452 0.78 +1.1
467,847 + MPMX20_00452 0.79 -2.5
467,860 - MPMX20_00452 0.81 -0.7
467,923 + MPMX20_00452 0.87 -1.5
467,939 + MPMX20_00452 0.89 -0.2
467,965 + -2.2
467,967 + -0.2
467,967 + -2.1
468,047 + +0.4
468,047 + -1.8
468,047 - -1.2
468,060 - -0.2
468,092 + +2.1
468,092 + -1.1

Or see this region's nucleotide sequence