Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00324

Experiment: 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00322 and MPMX20_00323 are separated by 20 nucleotidesMPMX20_00323 and MPMX20_00324 are separated by 52 nucleotidesMPMX20_00324 and MPMX20_00325 are separated by 24 nucleotidesMPMX20_00325 and MPMX20_00326 are separated by 136 nucleotides MPMX20_00322: MPMX20_00322 - putative transcriptional regulator PhnF, at 340,821 to 341,546 _00322 MPMX20_00323: MPMX20_00323 - Phosphate-import permease protein PhnE, at 341,567 to 342,346 _00323 MPMX20_00324: MPMX20_00324 - hypothetical protein, at 342,399 to 343,415 _00324 MPMX20_00325: MPMX20_00325 - Phosphate-import ATP-binding protein PhnC, at 343,440 to 344,228 _00325 MPMX20_00326: MPMX20_00326 - hypothetical protein, at 344,365 to 344,802 _00326 Position (kb) 342 343 344Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 341.408 kb on + strand, within MPMX20_00322at 341.432 kb on + strand, within MPMX20_00322at 341.442 kb on + strand, within MPMX20_00322at 341.487 kb on - strandat 341.498 kb on + strandat 341.498 kb on + strandat 341.568 kb on + strandat 341.635 kb on + strandat 341.635 kb on + strandat 341.643 kb on - strandat 341.692 kb on + strand, within MPMX20_00323at 341.700 kb on - strand, within MPMX20_00323at 341.771 kb on - strand, within MPMX20_00323at 341.787 kb on + strand, within MPMX20_00323at 341.795 kb on - strand, within MPMX20_00323at 341.800 kb on - strand, within MPMX20_00323at 341.838 kb on + strand, within MPMX20_00323at 341.948 kb on + strand, within MPMX20_00323at 341.982 kb on - strand, within MPMX20_00323at 342.042 kb on - strand, within MPMX20_00323at 342.068 kb on + strand, within MPMX20_00323at 342.166 kb on + strand, within MPMX20_00323at 342.219 kb on + strand, within MPMX20_00323at 342.227 kb on - strand, within MPMX20_00323at 342.331 kb on + strandat 342.347 kb on - strandat 342.362 kb on - strandat 342.377 kb on + strandat 342.385 kb on - strandat 342.421 kb on - strandat 342.423 kb on + strandat 342.460 kb on - strandat 342.461 kb on - strandat 342.472 kb on + strandat 342.509 kb on + strand, within MPMX20_00324at 342.543 kb on + strand, within MPMX20_00324at 342.544 kb on + strand, within MPMX20_00324at 342.552 kb on - strand, within MPMX20_00324at 342.552 kb on - strand, within MPMX20_00324at 342.567 kb on + strand, within MPMX20_00324at 342.586 kb on - strand, within MPMX20_00324at 342.612 kb on + strand, within MPMX20_00324at 342.612 kb on + strand, within MPMX20_00324at 342.612 kb on + strand, within MPMX20_00324at 342.620 kb on - strand, within MPMX20_00324at 342.620 kb on - strand, within MPMX20_00324at 342.620 kb on - strand, within MPMX20_00324at 342.669 kb on + strand, within MPMX20_00324at 342.669 kb on + strand, within MPMX20_00324at 342.669 kb on + strand, within MPMX20_00324at 342.669 kb on + strand, within MPMX20_00324at 342.724 kb on - strand, within MPMX20_00324at 342.768 kb on + strand, within MPMX20_00324at 342.795 kb on - strand, within MPMX20_00324at 342.861 kb on + strand, within MPMX20_00324at 342.862 kb on + strand, within MPMX20_00324at 342.958 kb on - strand, within MPMX20_00324at 343.060 kb on - strand, within MPMX20_00324at 343.098 kb on + strand, within MPMX20_00324at 343.098 kb on + strand, within MPMX20_00324at 343.098 kb on + strand, within MPMX20_00324at 343.140 kb on - strand, within MPMX20_00324at 343.179 kb on + strand, within MPMX20_00324at 343.180 kb on + strand, within MPMX20_00324at 343.273 kb on + strand, within MPMX20_00324at 343.286 kb on + strand, within MPMX20_00324at 343.294 kb on - strand, within MPMX20_00324at 343.338 kb on + strandat 343.348 kb on + strandat 343.348 kb on + strandat 343.348 kb on + strandat 343.348 kb on + strandat 343.348 kb on + strandat 343.348 kb on + strandat 343.348 kb on + strandat 343.351 kb on - strandat 343.356 kb on - strandat 343.356 kb on - strandat 343.358 kb on - strandat 343.381 kb on + strandat 343.386 kb on + strandat 343.410 kb on - strandat 343.413 kb on + strandat 343.419 kb on - strandat 343.433 kb on + strandat 343.441 kb on - strandat 343.455 kb on - strandat 343.477 kb on - strandat 343.477 kb on - strandat 343.479 kb on + strandat 343.503 kb on - strandat 343.526 kb on - strand, within MPMX20_00325at 343.565 kb on + strand, within MPMX20_00325at 343.568 kb on + strand, within MPMX20_00325at 343.581 kb on + strand, within MPMX20_00325at 343.600 kb on + strand, within MPMX20_00325at 343.604 kb on - strand, within MPMX20_00325at 343.611 kb on - strand, within MPMX20_00325at 343.613 kb on + strand, within MPMX20_00325at 343.646 kb on + strand, within MPMX20_00325at 343.688 kb on - strand, within MPMX20_00325at 343.738 kb on - strand, within MPMX20_00325at 343.745 kb on - strand, within MPMX20_00325at 343.762 kb on + strand, within MPMX20_00325at 343.772 kb on + strand, within MPMX20_00325at 343.772 kb on + strand, within MPMX20_00325at 343.780 kb on - strand, within MPMX20_00325at 343.780 kb on - strand, within MPMX20_00325at 343.780 kb on - strand, within MPMX20_00325at 343.780 kb on - strand, within MPMX20_00325at 343.780 kb on - strand, within MPMX20_00325at 343.780 kb on - strand, within MPMX20_00325at 343.815 kb on + strand, within MPMX20_00325at 343.850 kb on + strand, within MPMX20_00325at 343.858 kb on - strand, within MPMX20_00325at 343.858 kb on - strand, within MPMX20_00325at 343.868 kb on - strand, within MPMX20_00325at 343.891 kb on - strand, within MPMX20_00325at 343.911 kb on + strand, within MPMX20_00325at 343.949 kb on + strand, within MPMX20_00325at 343.964 kb on - strand, within MPMX20_00325at 344.020 kb on + strand, within MPMX20_00325at 344.020 kb on + strand, within MPMX20_00325at 344.020 kb on + strand, within MPMX20_00325at 344.023 kb on - strand, within MPMX20_00325at 344.023 kb on - strand, within MPMX20_00325at 344.061 kb on - strand, within MPMX20_00325at 344.096 kb on - strand, within MPMX20_00325at 344.097 kb on + strand, within MPMX20_00325at 344.105 kb on - strand, within MPMX20_00325at 344.117 kb on + strand, within MPMX20_00325at 344.134 kb on + strand, within MPMX20_00325at 344.166 kb on + strandat 344.181 kb on - strandat 344.183 kb on + strandat 344.211 kb on + strandat 344.213 kb on + strandat 344.289 kb on + strandat 344.289 kb on + strandat 344.297 kb on - strandat 344.304 kb on + strandat 344.314 kb on + strandat 344.314 kb on + strandat 344.322 kb on - strandat 344.322 kb on - strandat 344.322 kb on - strandat 344.322 kb on - strandat 344.322 kb on - strandat 344.333 kb on + strandat 344.335 kb on + strandat 344.335 kb on + strandat 344.335 kb on + strandat 344.343 kb on - strandat 344.368 kb on + strandat 344.407 kb on + strandat 344.413 kb on - strand, within MPMX20_00326

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Microbacterium jejuense SAI_031
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341,408 + MPMX20_00322 0.81 +2.7
341,432 + MPMX20_00322 0.84 +1.3
341,442 + MPMX20_00322 0.86 -0.3
341,487 - -0.9
341,498 + +0.2
341,498 + -1.1
341,568 + +3.8
341,635 + -1.0
341,635 + -2.0
341,643 - -0.7
341,692 + MPMX20_00323 0.16 -1.2
341,700 - MPMX20_00323 0.17 +0.4
341,771 - MPMX20_00323 0.26 +0.3
341,787 + MPMX20_00323 0.28 -0.7
341,795 - MPMX20_00323 0.29 -1.2
341,800 - MPMX20_00323 0.30 -2.2
341,838 + MPMX20_00323 0.35 +0.2
341,948 + MPMX20_00323 0.49 -0.8
341,982 - MPMX20_00323 0.53 +0.5
342,042 - MPMX20_00323 0.61 -0.7
342,068 + MPMX20_00323 0.64 -1.1
342,166 + MPMX20_00323 0.77 -0.5
342,219 + MPMX20_00323 0.84 -0.6
342,227 - MPMX20_00323 0.85 -0.8
342,331 + -1.1
342,347 - +1.1
342,362 - -2.3
342,377 + -1.2
342,385 - -0.3
342,421 - -1.7
342,423 + -0.3
342,460 - -0.4
342,461 - -0.6
342,472 + -0.0
342,509 + MPMX20_00324 0.11 -0.2
342,543 + MPMX20_00324 0.14 -0.6
342,544 + MPMX20_00324 0.14 +1.3
342,552 - MPMX20_00324 0.15 -0.9
342,552 - MPMX20_00324 0.15 -1.1
342,567 + MPMX20_00324 0.17 -0.4
342,586 - MPMX20_00324 0.18 -1.0
342,612 + MPMX20_00324 0.21 -1.7
342,612 + MPMX20_00324 0.21 +0.4
342,612 + MPMX20_00324 0.21 -0.2
342,620 - MPMX20_00324 0.22 -0.9
342,620 - MPMX20_00324 0.22 +0.9
342,620 - MPMX20_00324 0.22 -0.9
342,669 + MPMX20_00324 0.27 +1.1
342,669 + MPMX20_00324 0.27 -0.2
342,669 + MPMX20_00324 0.27 -0.1
342,669 + MPMX20_00324 0.27 +0.9
342,724 - MPMX20_00324 0.32 -1.1
342,768 + MPMX20_00324 0.36 -0.9
342,795 - MPMX20_00324 0.39 -0.9
342,861 + MPMX20_00324 0.45 -0.5
342,862 + MPMX20_00324 0.46 +0.1
342,958 - MPMX20_00324 0.55 -1.7
343,060 - MPMX20_00324 0.65 -0.7
343,098 + MPMX20_00324 0.69 -0.2
343,098 + MPMX20_00324 0.69 +1.3
343,098 + MPMX20_00324 0.69 -0.5
343,140 - MPMX20_00324 0.73 -1.4
343,179 + MPMX20_00324 0.77 -0.3
343,180 + MPMX20_00324 0.77 +1.1
343,273 + MPMX20_00324 0.86 +0.1
343,286 + MPMX20_00324 0.87 -0.5
343,294 - MPMX20_00324 0.88 -2.0
343,338 + -1.2
343,348 + -0.7
343,348 + -0.5
343,348 + -1.1
343,348 + +0.1
343,348 + -0.2
343,348 + +0.3
343,348 + -1.0
343,351 - +0.3
343,356 - -1.0
343,356 - -0.9
343,358 - -1.1
343,381 + -1.1
343,386 + +0.1
343,410 - +2.1
343,413 + -0.0
343,419 - -0.8
343,433 + -0.9
343,441 - -0.3
343,455 - +0.1
343,477 - -0.8
343,477 - +0.5
343,479 + -0.6
343,503 - +0.5
343,526 - MPMX20_00325 0.11 +0.4
343,565 + MPMX20_00325 0.16 -0.2
343,568 + MPMX20_00325 0.16 +0.7
343,581 + MPMX20_00325 0.18 +2.6
343,600 + MPMX20_00325 0.20 -0.9
343,604 - MPMX20_00325 0.21 -1.0
343,611 - MPMX20_00325 0.22 +0.2
343,613 + MPMX20_00325 0.22 +2.1
343,646 + MPMX20_00325 0.26 -2.2
343,688 - MPMX20_00325 0.31 -0.1
343,738 - MPMX20_00325 0.38 -0.7
343,745 - MPMX20_00325 0.39 -2.1
343,762 + MPMX20_00325 0.41 -0.9
343,772 + MPMX20_00325 0.42 +0.4
343,772 + MPMX20_00325 0.42 -0.4
343,780 - MPMX20_00325 0.43 -0.3
343,780 - MPMX20_00325 0.43 +0.3
343,780 - MPMX20_00325 0.43 +0.3
343,780 - MPMX20_00325 0.43 +0.6
343,780 - MPMX20_00325 0.43 +1.2
343,780 - MPMX20_00325 0.43 -0.9
343,815 + MPMX20_00325 0.48 -0.5
343,850 + MPMX20_00325 0.52 -1.4
343,858 - MPMX20_00325 0.53 +0.3
343,858 - MPMX20_00325 0.53 -0.9
343,868 - MPMX20_00325 0.54 -2.1
343,891 - MPMX20_00325 0.57 -1.5
343,911 + MPMX20_00325 0.60 +1.1
343,949 + MPMX20_00325 0.65 -1.5
343,964 - MPMX20_00325 0.66 +0.1
344,020 + MPMX20_00325 0.74 +0.5
344,020 + MPMX20_00325 0.74 -1.3
344,020 + MPMX20_00325 0.74 +0.2
344,023 - MPMX20_00325 0.74 -1.1
344,023 - MPMX20_00325 0.74 +0.0
344,061 - MPMX20_00325 0.79 -0.1
344,096 - MPMX20_00325 0.83 +2.0
344,097 + MPMX20_00325 0.83 +0.1
344,105 - MPMX20_00325 0.84 -1.8
344,117 + MPMX20_00325 0.86 -0.8
344,134 + MPMX20_00325 0.88 +3.1
344,166 + -1.2
344,181 - +0.0
344,183 + -0.7
344,211 + -0.9
344,213 + +0.4
344,289 + -0.1
344,289 + -0.2
344,297 - -0.7
344,304 + -0.6
344,314 + -0.2
344,314 + -0.2
344,322 - +2.1
344,322 - -0.2
344,322 - +0.4
344,322 - +1.9
344,322 - +0.1
344,333 + +0.1
344,335 + -0.3
344,335 + +1.3
344,335 + -1.1
344,343 - -0.5
344,368 + -0.4
344,407 + +0.1
344,413 - MPMX20_00326 0.11 +0.1

Or see this region's nucleotide sequence