Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04327

Experiment: 0.1X LB plate, 1:1 coculture with Promicromonospora thailandica SAI_039

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04326 and MPMX20_04327 are separated by 1 nucleotidesMPMX20_04327 and MPMX20_04328 overlap by 4 nucleotidesMPMX20_04328 and MPMX20_04329 are separated by 73 nucleotides MPMX20_04326: MPMX20_04326 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 4,520,270 to 4,521,340 _04326 MPMX20_04327: MPMX20_04327 - Lactose transport system permease protein LacG, at 4,521,342 to 4,522,187 _04327 MPMX20_04328: MPMX20_04328 - sn-glycerol-3-phosphate transport system permease protein UgpA, at 4,522,184 to 4,523,071 _04328 MPMX20_04329: MPMX20_04329 - sn-glycerol-3-phosphate-binding periplasmic protein UgpB, at 4,523,145 to 4,524,461 _04329 Position (kb) 4521 4522 4523Strain fitness (log2 ratio) -2 -1 0 1 2 3at 4520.346 kb on + strandat 4520.346 kb on + strandat 4520.346 kb on + strandat 4520.354 kb on - strandat 4520.354 kb on - strandat 4520.354 kb on - strandat 4520.394 kb on + strand, within MPMX20_04326at 4520.421 kb on + strand, within MPMX20_04326at 4520.431 kb on + strand, within MPMX20_04326at 4520.442 kb on + strand, within MPMX20_04326at 4520.471 kb on - strand, within MPMX20_04326at 4520.478 kb on - strand, within MPMX20_04326at 4520.479 kb on - strand, within MPMX20_04326at 4520.565 kb on - strand, within MPMX20_04326at 4520.734 kb on + strand, within MPMX20_04326at 4520.742 kb on - strand, within MPMX20_04326at 4520.812 kb on + strand, within MPMX20_04326at 4520.868 kb on + strand, within MPMX20_04326at 4520.878 kb on + strand, within MPMX20_04326at 4520.924 kb on - strand, within MPMX20_04326at 4520.924 kb on - strand, within MPMX20_04326at 4520.924 kb on - strand, within MPMX20_04326at 4520.924 kb on - strand, within MPMX20_04326at 4520.938 kb on + strand, within MPMX20_04326at 4520.971 kb on + strand, within MPMX20_04326at 4521.119 kb on - strand, within MPMX20_04326at 4521.132 kb on - strand, within MPMX20_04326at 4521.170 kb on + strand, within MPMX20_04326at 4521.223 kb on - strand, within MPMX20_04326at 4521.289 kb on + strandat 4521.341 kb on - strandat 4521.410 kb on + strandat 4521.410 kb on + strandat 4521.418 kb on - strandat 4521.423 kb on - strandat 4521.453 kb on - strand, within MPMX20_04327at 4521.548 kb on + strand, within MPMX20_04327at 4521.548 kb on + strand, within MPMX20_04327at 4521.560 kb on + strand, within MPMX20_04327at 4521.661 kb on + strand, within MPMX20_04327at 4521.661 kb on + strand, within MPMX20_04327at 4521.741 kb on + strand, within MPMX20_04327at 4521.741 kb on + strand, within MPMX20_04327at 4521.741 kb on + strand, within MPMX20_04327at 4521.741 kb on + strand, within MPMX20_04327at 4521.741 kb on + strand, within MPMX20_04327at 4521.741 kb on + strand, within MPMX20_04327at 4521.741 kb on + strand, within MPMX20_04327at 4521.749 kb on - strand, within MPMX20_04327at 4521.749 kb on - strand, within MPMX20_04327at 4521.749 kb on - strand, within MPMX20_04327at 4521.749 kb on - strand, within MPMX20_04327at 4521.774 kb on - strand, within MPMX20_04327at 4521.801 kb on + strand, within MPMX20_04327at 4521.853 kb on + strand, within MPMX20_04327at 4521.863 kb on + strand, within MPMX20_04327at 4521.871 kb on - strand, within MPMX20_04327at 4521.908 kb on + strand, within MPMX20_04327at 4521.923 kb on + strand, within MPMX20_04327at 4521.923 kb on + strand, within MPMX20_04327at 4521.931 kb on - strand, within MPMX20_04327at 4521.931 kb on - strand, within MPMX20_04327at 4521.931 kb on - strand, within MPMX20_04327at 4521.981 kb on + strand, within MPMX20_04327at 4521.994 kb on + strand, within MPMX20_04327at 4521.996 kb on - strand, within MPMX20_04327at 4522.017 kb on - strand, within MPMX20_04327at 4522.036 kb on + strand, within MPMX20_04327at 4522.036 kb on + strand, within MPMX20_04327at 4522.075 kb on - strand, within MPMX20_04327at 4522.166 kb on + strandat 4522.210 kb on - strandat 4522.230 kb on - strandat 4522.337 kb on + strand, within MPMX20_04328at 4522.342 kb on + strand, within MPMX20_04328at 4522.394 kb on + strand, within MPMX20_04328at 4522.394 kb on + strand, within MPMX20_04328at 4522.395 kb on + strand, within MPMX20_04328at 4522.395 kb on + strand, within MPMX20_04328at 4522.395 kb on + strand, within MPMX20_04328at 4522.472 kb on + strand, within MPMX20_04328at 4522.477 kb on + strand, within MPMX20_04328at 4522.477 kb on + strand, within MPMX20_04328at 4522.477 kb on + strand, within MPMX20_04328at 4522.485 kb on - strand, within MPMX20_04328at 4522.485 kb on - strand, within MPMX20_04328at 4522.485 kb on - strand, within MPMX20_04328at 4522.485 kb on - strand, within MPMX20_04328at 4522.508 kb on - strand, within MPMX20_04328at 4522.508 kb on - strand, within MPMX20_04328at 4522.527 kb on - strand, within MPMX20_04328at 4522.534 kb on + strand, within MPMX20_04328at 4522.613 kb on + strand, within MPMX20_04328at 4522.616 kb on - strand, within MPMX20_04328at 4522.632 kb on - strand, within MPMX20_04328at 4522.645 kb on - strand, within MPMX20_04328at 4522.733 kb on - strand, within MPMX20_04328at 4522.759 kb on - strand, within MPMX20_04328at 4522.891 kb on + strand, within MPMX20_04328at 4522.891 kb on + strand, within MPMX20_04328at 4522.896 kb on + strand, within MPMX20_04328at 4522.943 kb on + strand, within MPMX20_04328at 4522.998 kb on + strandat 4523.064 kb on - strandat 4523.073 kb on - strandat 4523.074 kb on - strandat 4523.081 kb on - strandat 4523.089 kb on - strandat 4523.099 kb on + strandat 4523.101 kb on - strandat 4523.105 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Promicromonospora thailandica SAI_039
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4,520,346 + -0.9
4,520,346 + +0.1
4,520,346 + -1.2
4,520,354 - +1.0
4,520,354 - -0.6
4,520,354 - -1.1
4,520,394 + MPMX20_04326 0.12 -0.7
4,520,421 + MPMX20_04326 0.14 +0.2
4,520,431 + MPMX20_04326 0.15 +0.1
4,520,442 + MPMX20_04326 0.16 +2.4
4,520,471 - MPMX20_04326 0.19 -0.2
4,520,478 - MPMX20_04326 0.19 +1.1
4,520,479 - MPMX20_04326 0.20 +0.2
4,520,565 - MPMX20_04326 0.28 -0.2
4,520,734 + MPMX20_04326 0.43 +1.2
4,520,742 - MPMX20_04326 0.44 -0.9
4,520,812 + MPMX20_04326 0.51 -2.4
4,520,868 + MPMX20_04326 0.56 -1.5
4,520,878 + MPMX20_04326 0.57 -1.2
4,520,924 - MPMX20_04326 0.61 +0.0
4,520,924 - MPMX20_04326 0.61 -0.0
4,520,924 - MPMX20_04326 0.61 +1.0
4,520,924 - MPMX20_04326 0.61 -1.3
4,520,938 + MPMX20_04326 0.62 -1.7
4,520,971 + MPMX20_04326 0.65 +0.4
4,521,119 - MPMX20_04326 0.79 +0.6
4,521,132 - MPMX20_04326 0.80 -0.5
4,521,170 + MPMX20_04326 0.84 +0.1
4,521,223 - MPMX20_04326 0.89 -1.5
4,521,289 + +1.0
4,521,341 - +1.1
4,521,410 + +0.7
4,521,410 + +1.3
4,521,418 - -0.2
4,521,423 - +1.1
4,521,453 - MPMX20_04327 0.13 -2.1
4,521,548 + MPMX20_04327 0.24 +1.0
4,521,548 + MPMX20_04327 0.24 +0.1
4,521,560 + MPMX20_04327 0.26 -1.0
4,521,661 + MPMX20_04327 0.38 -0.5
4,521,661 + MPMX20_04327 0.38 +2.4
4,521,741 + MPMX20_04327 0.47 -0.6
4,521,741 + MPMX20_04327 0.47 -2.4
4,521,741 + MPMX20_04327 0.47 -0.7
4,521,741 + MPMX20_04327 0.47 -0.2
4,521,741 + MPMX20_04327 0.47 +1.9
4,521,741 + MPMX20_04327 0.47 +1.5
4,521,741 + MPMX20_04327 0.47 -0.7
4,521,749 - MPMX20_04327 0.48 +1.3
4,521,749 - MPMX20_04327 0.48 -1.5
4,521,749 - MPMX20_04327 0.48 -1.0
4,521,749 - MPMX20_04327 0.48 +1.0
4,521,774 - MPMX20_04327 0.51 -0.1
4,521,801 + MPMX20_04327 0.54 -1.6
4,521,853 + MPMX20_04327 0.60 +0.2
4,521,863 + MPMX20_04327 0.62 -0.9
4,521,871 - MPMX20_04327 0.63 +0.7
4,521,908 + MPMX20_04327 0.67 +1.2
4,521,923 + MPMX20_04327 0.69 +0.5
4,521,923 + MPMX20_04327 0.69 -1.6
4,521,931 - MPMX20_04327 0.70 +0.1
4,521,931 - MPMX20_04327 0.70 -0.3
4,521,931 - MPMX20_04327 0.70 +2.9
4,521,981 + MPMX20_04327 0.76 -0.2
4,521,994 + MPMX20_04327 0.77 -0.0
4,521,996 - MPMX20_04327 0.77 -0.6
4,522,017 - MPMX20_04327 0.80 -1.9
4,522,036 + MPMX20_04327 0.82 -0.6
4,522,036 + MPMX20_04327 0.82 -0.9
4,522,075 - MPMX20_04327 0.87 +0.0
4,522,166 + -0.4
4,522,210 - -0.8
4,522,230 - +0.2
4,522,337 + MPMX20_04328 0.17 -1.7
4,522,342 + MPMX20_04328 0.18 -0.3
4,522,394 + MPMX20_04328 0.24 +3.0
4,522,394 + MPMX20_04328 0.24 -1.4
4,522,395 + MPMX20_04328 0.24 -2.2
4,522,395 + MPMX20_04328 0.24 +2.3
4,522,395 + MPMX20_04328 0.24 +0.1
4,522,472 + MPMX20_04328 0.32 -0.1
4,522,477 + MPMX20_04328 0.33 +2.1
4,522,477 + MPMX20_04328 0.33 -1.2
4,522,477 + MPMX20_04328 0.33 -0.6
4,522,485 - MPMX20_04328 0.34 +1.5
4,522,485 - MPMX20_04328 0.34 -0.4
4,522,485 - MPMX20_04328 0.34 +0.5
4,522,485 - MPMX20_04328 0.34 -0.7
4,522,508 - MPMX20_04328 0.36 +2.1
4,522,508 - MPMX20_04328 0.36 -0.7
4,522,527 - MPMX20_04328 0.39 -1.0
4,522,534 + MPMX20_04328 0.39 +1.1
4,522,613 + MPMX20_04328 0.48 +0.4
4,522,616 - MPMX20_04328 0.49 -1.5
4,522,632 - MPMX20_04328 0.50 -0.2
4,522,645 - MPMX20_04328 0.52 +0.1
4,522,733 - MPMX20_04328 0.62 -0.2
4,522,759 - MPMX20_04328 0.65 +0.7
4,522,891 + MPMX20_04328 0.80 -0.9
4,522,891 + MPMX20_04328 0.80 +0.9
4,522,896 + MPMX20_04328 0.80 +1.2
4,522,943 + MPMX20_04328 0.85 -0.7
4,522,998 + -0.6
4,523,064 - -2.1
4,523,073 - -0.9
4,523,074 - -1.8
4,523,081 - +1.0
4,523,089 - +0.5
4,523,099 + +0.9
4,523,101 - -0.4
4,523,105 - -0.4

Or see this region's nucleotide sequence