Experiment: 0.1X LB plate, 1:1 coculture with Promicromonospora thailandica SAI_039
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02235 and MPMX20_02236 overlap by 1 nucleotides MPMX20_02236 and MPMX20_02237 overlap by 4 nucleotides
MPMX20_02235: MPMX20_02235 - Tellurite resistance protein TehA, at 2,347,167 to 2,348,168
_02235
MPMX20_02236: MPMX20_02236 - Tellurite methyltransferase, at 2,348,168 to 2,348,761
_02236
MPMX20_02237: MPMX20_02237 - Peptidase T, at 2,348,758 to 2,349,987
_02237
Position (kb)
2348
2349 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2347.194 kb on + strand at 2347.194 kb on + strand at 2347.194 kb on + strand at 2347.195 kb on + strand at 2347.195 kb on + strand at 2347.195 kb on + strand at 2347.203 kb on - strand at 2347.274 kb on + strand, within MPMX20_02235 at 2347.294 kb on + strand, within MPMX20_02235 at 2347.294 kb on + strand, within MPMX20_02235 at 2347.299 kb on + strand, within MPMX20_02235 at 2347.307 kb on - strand, within MPMX20_02235 at 2347.336 kb on - strand, within MPMX20_02235 at 2347.372 kb on - strand, within MPMX20_02235 at 2347.529 kb on + strand, within MPMX20_02235 at 2347.529 kb on + strand, within MPMX20_02235 at 2347.529 kb on + strand, within MPMX20_02235 at 2347.596 kb on + strand, within MPMX20_02235 at 2347.597 kb on + strand, within MPMX20_02235 at 2347.633 kb on + strand, within MPMX20_02235 at 2347.641 kb on - strand, within MPMX20_02235 at 2347.711 kb on + strand, within MPMX20_02235 at 2347.711 kb on + strand, within MPMX20_02235 at 2347.711 kb on + strand, within MPMX20_02235 at 2347.711 kb on + strand, within MPMX20_02235 at 2347.711 kb on + strand, within MPMX20_02235 at 2347.711 kb on + strand, within MPMX20_02235 at 2347.719 kb on - strand, within MPMX20_02235 at 2347.719 kb on - strand, within MPMX20_02235 at 2347.719 kb on - strand, within MPMX20_02235 at 2347.783 kb on + strand, within MPMX20_02235 at 2347.791 kb on - strand, within MPMX20_02235 at 2347.791 kb on - strand, within MPMX20_02235 at 2347.791 kb on - strand, within MPMX20_02235 at 2347.816 kb on - strand, within MPMX20_02235 at 2347.873 kb on + strand, within MPMX20_02235 at 2347.881 kb on - strand, within MPMX20_02235 at 2347.946 kb on + strand, within MPMX20_02235 at 2347.968 kb on - strand, within MPMX20_02235 at 2347.974 kb on + strand, within MPMX20_02235 at 2347.974 kb on + strand, within MPMX20_02235 at 2347.982 kb on - strand, within MPMX20_02235 at 2347.990 kb on + strand, within MPMX20_02235 at 2347.996 kb on + strand, within MPMX20_02235 at 2347.996 kb on + strand, within MPMX20_02235 at 2348.009 kb on - strand, within MPMX20_02235 at 2348.009 kb on - strand, within MPMX20_02235 at 2348.009 kb on - strand, within MPMX20_02235 at 2348.027 kb on - strand, within MPMX20_02235 at 2348.030 kb on + strand, within MPMX20_02235 at 2348.038 kb on - strand, within MPMX20_02235 at 2348.046 kb on + strand, within MPMX20_02235 at 2348.052 kb on + strand, within MPMX20_02235 at 2348.099 kb on - strand at 2348.101 kb on + strand at 2348.118 kb on + strand at 2348.123 kb on + strand at 2348.155 kb on - strand at 2348.204 kb on + strand at 2348.212 kb on - strand at 2348.223 kb on + strand at 2348.228 kb on + strand, within MPMX20_02236 at 2348.228 kb on + strand, within MPMX20_02236 at 2348.228 kb on + strand, within MPMX20_02236 at 2348.231 kb on - strand, within MPMX20_02236 at 2348.236 kb on - strand, within MPMX20_02236 at 2348.270 kb on + strand, within MPMX20_02236 at 2348.280 kb on + strand, within MPMX20_02236 at 2348.288 kb on - strand, within MPMX20_02236 at 2348.298 kb on + strand, within MPMX20_02236 at 2348.319 kb on + strand, within MPMX20_02236 at 2348.382 kb on - strand, within MPMX20_02236 at 2348.420 kb on + strand, within MPMX20_02236 at 2348.466 kb on + strand, within MPMX20_02236 at 2348.474 kb on + strand, within MPMX20_02236 at 2348.517 kb on + strand, within MPMX20_02236 at 2348.522 kb on + strand, within MPMX20_02236 at 2348.522 kb on + strand, within MPMX20_02236 at 2348.530 kb on - strand, within MPMX20_02236 at 2348.532 kb on + strand, within MPMX20_02236 at 2348.532 kb on + strand, within MPMX20_02236 at 2348.547 kb on + strand, within MPMX20_02236 at 2348.555 kb on - strand, within MPMX20_02236 at 2348.555 kb on - strand, within MPMX20_02236 at 2348.555 kb on - strand, within MPMX20_02236 at 2348.555 kb on - strand, within MPMX20_02236 at 2348.588 kb on - strand, within MPMX20_02236 at 2348.670 kb on + strand, within MPMX20_02236 at 2348.699 kb on + strand, within MPMX20_02236 at 2348.707 kb on - strand at 2348.723 kb on - strand at 2348.873 kb on + strand at 2348.878 kb on + strand at 2348.886 kb on - strand, within MPMX20_02237 at 2348.976 kb on + strand, within MPMX20_02237 at 2349.019 kb on + strand, within MPMX20_02237 at 2349.171 kb on - strand, within MPMX20_02237 at 2349.193 kb on + strand, within MPMX20_02237 at 2349.193 kb on + strand, within MPMX20_02237 at 2349.193 kb on + strand, within MPMX20_02237 at 2349.271 kb on - strand, within MPMX20_02237 at 2349.275 kb on + strand, within MPMX20_02237 at 2349.275 kb on + strand, within MPMX20_02237 at 2349.275 kb on + strand, within MPMX20_02237 at 2349.275 kb on + strand, within MPMX20_02237 at 2349.283 kb on - strand, within MPMX20_02237 at 2349.283 kb on - strand, within MPMX20_02237 at 2349.283 kb on - strand, within MPMX20_02237 at 2349.283 kb on - strand, within MPMX20_02237 at 2349.301 kb on + strand, within MPMX20_02237 at 2349.355 kb on - strand, within MPMX20_02237 at 2349.355 kb on - strand, within MPMX20_02237 at 2349.368 kb on + strand, within MPMX20_02237 at 2349.378 kb on + strand, within MPMX20_02237 at 2349.378 kb on + strand, within MPMX20_02237 at 2349.378 kb on + strand, within MPMX20_02237 at 2349.378 kb on + strand, within MPMX20_02237 at 2349.378 kb on + strand, within MPMX20_02237 at 2349.385 kb on + strand, within MPMX20_02237 at 2349.386 kb on - strand, within MPMX20_02237 at 2349.386 kb on - strand, within MPMX20_02237 at 2349.386 kb on - strand, within MPMX20_02237 at 2349.386 kb on - strand, within MPMX20_02237 at 2349.386 kb on - strand, within MPMX20_02237 at 2349.386 kb on - strand, within MPMX20_02237 at 2349.386 kb on - strand, within MPMX20_02237 at 2349.386 kb on - strand, within MPMX20_02237 at 2349.386 kb on - strand, within MPMX20_02237 at 2349.386 kb on - strand, within MPMX20_02237 at 2349.386 kb on - strand, within MPMX20_02237 at 2349.386 kb on - strand, within MPMX20_02237 at 2349.386 kb on - strand, within MPMX20_02237 at 2349.386 kb on - strand, within MPMX20_02237 at 2349.393 kb on - strand, within MPMX20_02237 at 2349.395 kb on - strand, within MPMX20_02237 at 2349.395 kb on - strand, within MPMX20_02237 at 2349.430 kb on - strand, within MPMX20_02237 at 2349.443 kb on - strand, within MPMX20_02237 at 2349.457 kb on + strand, within MPMX20_02237 at 2349.457 kb on + strand, within MPMX20_02237 at 2349.476 kb on - strand, within MPMX20_02237 at 2349.483 kb on + strand, within MPMX20_02237 at 2349.493 kb on + strand, within MPMX20_02237 at 2349.493 kb on + strand, within MPMX20_02237 at 2349.501 kb on + strand, within MPMX20_02237 at 2349.501 kb on + strand, within MPMX20_02237 at 2349.501 kb on + strand, within MPMX20_02237 at 2349.501 kb on + strand, within MPMX20_02237 at 2349.506 kb on + strand, within MPMX20_02237 at 2349.523 kb on - strand, within MPMX20_02237 at 2349.523 kb on - strand, within MPMX20_02237 at 2349.524 kb on + strand, within MPMX20_02237 at 2349.526 kb on + strand, within MPMX20_02237 at 2349.526 kb on + strand, within MPMX20_02237 at 2349.526 kb on + strand, within MPMX20_02237 at 2349.526 kb on + strand, within MPMX20_02237 at 2349.527 kb on + strand, within MPMX20_02237 at 2349.527 kb on + strand, within MPMX20_02237 at 2349.527 kb on + strand, within MPMX20_02237 at 2349.527 kb on + strand, within MPMX20_02237 at 2349.527 kb on + strand, within MPMX20_02237 at 2349.527 kb on + strand, within MPMX20_02237 at 2349.527 kb on + strand, within MPMX20_02237 at 2349.527 kb on + strand, within MPMX20_02237 at 2349.527 kb on + strand, within MPMX20_02237 at 2349.527 kb on + strand, within MPMX20_02237 at 2349.527 kb on + strand, within MPMX20_02237 at 2349.527 kb on + strand, within MPMX20_02237 at 2349.527 kb on + strand, within MPMX20_02237 at 2349.527 kb on + strand, within MPMX20_02237 at 2349.527 kb on + strand, within MPMX20_02237 at 2349.534 kb on - strand, within MPMX20_02237 at 2349.535 kb on - strand, within MPMX20_02237 at 2349.535 kb on - strand, within MPMX20_02237 at 2349.535 kb on - strand, within MPMX20_02237 at 2349.537 kb on + strand, within MPMX20_02237 at 2349.537 kb on + strand, within MPMX20_02237 at 2349.537 kb on + strand, within MPMX20_02237 at 2349.537 kb on + strand, within MPMX20_02237 at 2349.537 kb on + strand, within MPMX20_02237 at 2349.537 kb on + strand, within MPMX20_02237 at 2349.538 kb on + strand, within MPMX20_02237 at 2349.548 kb on + strand, within MPMX20_02237 at 2349.548 kb on + strand, within MPMX20_02237 at 2349.548 kb on + strand, within MPMX20_02237 at 2349.548 kb on + strand, within MPMX20_02237 at 2349.548 kb on + strand, within MPMX20_02237 at 2349.548 kb on + strand, within MPMX20_02237 at 2349.570 kb on + strand, within MPMX20_02237 at 2349.570 kb on + strand, within MPMX20_02237 at 2349.595 kb on + strand, within MPMX20_02237 at 2349.595 kb on + strand, within MPMX20_02237 at 2349.595 kb on + strand, within MPMX20_02237 at 2349.605 kb on + strand, within MPMX20_02237 at 2349.605 kb on + strand, within MPMX20_02237 at 2349.630 kb on + strand, within MPMX20_02237 at 2349.630 kb on + strand, within MPMX20_02237 at 2349.668 kb on + strand, within MPMX20_02237 at 2349.673 kb on + strand, within MPMX20_02237 at 2349.678 kb on - strand, within MPMX20_02237 at 2349.681 kb on - strand, within MPMX20_02237 at 2349.724 kb on - strand, within MPMX20_02237 at 2349.734 kb on + strand, within MPMX20_02237 at 2349.742 kb on - strand, within MPMX20_02237
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Promicromonospora thailandica SAI_039 remove 2,347,194 + -0.8 2,347,194 + +1.1 2,347,194 + -1.0 2,347,195 + -0.3 2,347,195 + +0.7 2,347,195 + +0.0 2,347,203 - -2.6 2,347,274 + MPMX20_02235 0.11 -2.0 2,347,294 + MPMX20_02235 0.13 -2.3 2,347,294 + MPMX20_02235 0.13 -0.9 2,347,299 + MPMX20_02235 0.13 +0.5 2,347,307 - MPMX20_02235 0.14 -0.7 2,347,336 - MPMX20_02235 0.17 +0.2 2,347,372 - MPMX20_02235 0.20 -0.0 2,347,529 + MPMX20_02235 0.36 +0.9 2,347,529 + MPMX20_02235 0.36 +4.7 2,347,529 + MPMX20_02235 0.36 -0.8 2,347,596 + MPMX20_02235 0.43 -0.3 2,347,597 + MPMX20_02235 0.43 -1.1 2,347,633 + MPMX20_02235 0.47 -0.7 2,347,641 - MPMX20_02235 0.47 +0.5 2,347,711 + MPMX20_02235 0.54 +0.4 2,347,711 + MPMX20_02235 0.54 +0.0 2,347,711 + MPMX20_02235 0.54 -1.0 2,347,711 + MPMX20_02235 0.54 +0.7 2,347,711 + MPMX20_02235 0.54 -1.1 2,347,711 + MPMX20_02235 0.54 -0.5 2,347,719 - MPMX20_02235 0.55 -1.4 2,347,719 - MPMX20_02235 0.55 +0.4 2,347,719 - MPMX20_02235 0.55 -1.3 2,347,783 + MPMX20_02235 0.61 +0.9 2,347,791 - MPMX20_02235 0.62 -3.0 2,347,791 - MPMX20_02235 0.62 -0.7 2,347,791 - MPMX20_02235 0.62 +0.4 2,347,816 - MPMX20_02235 0.65 +0.3 2,347,873 + MPMX20_02235 0.70 +0.8 2,347,881 - MPMX20_02235 0.71 +0.7 2,347,946 + MPMX20_02235 0.78 -0.3 2,347,968 - MPMX20_02235 0.80 -1.4 2,347,974 + MPMX20_02235 0.81 -0.4 2,347,974 + MPMX20_02235 0.81 -1.2 2,347,982 - MPMX20_02235 0.81 +0.8 2,347,990 + MPMX20_02235 0.82 +0.0 2,347,996 + MPMX20_02235 0.83 +0.3 2,347,996 + MPMX20_02235 0.83 -0.0 2,348,009 - MPMX20_02235 0.84 -2.0 2,348,009 - MPMX20_02235 0.84 +0.5 2,348,009 - MPMX20_02235 0.84 +1.4 2,348,027 - MPMX20_02235 0.86 +0.4 2,348,030 + MPMX20_02235 0.86 -0.2 2,348,038 - MPMX20_02235 0.87 +0.7 2,348,046 + MPMX20_02235 0.88 -1.4 2,348,052 + MPMX20_02235 0.88 -1.3 2,348,099 - +1.4 2,348,101 + +0.0 2,348,118 + -0.5 2,348,123 + -0.4 2,348,155 - -1.1 2,348,204 + -0.4 2,348,212 - +1.1 2,348,223 + -1.1 2,348,228 + MPMX20_02236 0.10 -1.0 2,348,228 + MPMX20_02236 0.10 -0.1 2,348,228 + MPMX20_02236 0.10 -0.9 2,348,231 - MPMX20_02236 0.11 +0.2 2,348,236 - MPMX20_02236 0.11 -0.1 2,348,270 + MPMX20_02236 0.17 +0.5 2,348,280 + MPMX20_02236 0.19 +1.8 2,348,288 - MPMX20_02236 0.20 -0.4 2,348,298 + MPMX20_02236 0.22 +3.9 2,348,319 + MPMX20_02236 0.25 -0.7 2,348,382 - MPMX20_02236 0.36 +0.5 2,348,420 + MPMX20_02236 0.42 +0.9 2,348,466 + MPMX20_02236 0.50 +0.6 2,348,474 + MPMX20_02236 0.52 -0.2 2,348,517 + MPMX20_02236 0.59 -3.1 2,348,522 + MPMX20_02236 0.60 -0.8 2,348,522 + MPMX20_02236 0.60 -1.0 2,348,530 - MPMX20_02236 0.61 -0.3 2,348,532 + MPMX20_02236 0.61 -1.1 2,348,532 + MPMX20_02236 0.61 +0.0 2,348,547 + MPMX20_02236 0.64 -0.3 2,348,555 - MPMX20_02236 0.65 -0.1 2,348,555 - MPMX20_02236 0.65 -0.2 2,348,555 - MPMX20_02236 0.65 -1.6 2,348,555 - MPMX20_02236 0.65 +0.4 2,348,588 - MPMX20_02236 0.71 -0.4 2,348,670 + MPMX20_02236 0.85 +1.0 2,348,699 + MPMX20_02236 0.89 -1.0 2,348,707 - -0.8 2,348,723 - +0.6 2,348,873 + +0.0 2,348,878 + +0.1 2,348,886 - MPMX20_02237 0.10 +0.1 2,348,976 + MPMX20_02237 0.18 -0.7 2,349,019 + MPMX20_02237 0.21 +3.0 2,349,171 - MPMX20_02237 0.34 -0.4 2,349,193 + MPMX20_02237 0.35 +1.7 2,349,193 + MPMX20_02237 0.35 -0.5 2,349,193 + MPMX20_02237 0.35 +0.9 2,349,271 - MPMX20_02237 0.42 -1.1 2,349,275 + MPMX20_02237 0.42 -0.2 2,349,275 + MPMX20_02237 0.42 +3.5 2,349,275 + MPMX20_02237 0.42 -1.7 2,349,275 + MPMX20_02237 0.42 +1.1 2,349,283 - MPMX20_02237 0.43 -1.4 2,349,283 - MPMX20_02237 0.43 +0.1 2,349,283 - MPMX20_02237 0.43 +0.6 2,349,283 - MPMX20_02237 0.43 +1.9 2,349,301 + MPMX20_02237 0.44 +0.0 2,349,355 - MPMX20_02237 0.49 -2.3 2,349,355 - MPMX20_02237 0.49 +0.1 2,349,368 + MPMX20_02237 0.50 +0.8 2,349,378 + MPMX20_02237 0.50 -1.3 2,349,378 + MPMX20_02237 0.50 -1.0 2,349,378 + MPMX20_02237 0.50 -0.2 2,349,378 + MPMX20_02237 0.50 +0.4 2,349,378 + MPMX20_02237 0.50 +1.9 2,349,385 + MPMX20_02237 0.51 -1.1 2,349,386 - MPMX20_02237 0.51 -0.7 2,349,386 - MPMX20_02237 0.51 -2.4 2,349,386 - MPMX20_02237 0.51 +0.2 2,349,386 - MPMX20_02237 0.51 -0.0 2,349,386 - MPMX20_02237 0.51 -1.2 2,349,386 - MPMX20_02237 0.51 +0.5 2,349,386 - MPMX20_02237 0.51 +0.4 2,349,386 - MPMX20_02237 0.51 +0.1 2,349,386 - MPMX20_02237 0.51 -0.5 2,349,386 - MPMX20_02237 0.51 +0.7 2,349,386 - MPMX20_02237 0.51 +1.1 2,349,386 - MPMX20_02237 0.51 +0.4 2,349,386 - MPMX20_02237 0.51 +0.1 2,349,386 - MPMX20_02237 0.51 +0.9 2,349,393 - MPMX20_02237 0.52 -1.0 2,349,395 - MPMX20_02237 0.52 +0.6 2,349,395 - MPMX20_02237 0.52 -1.2 2,349,430 - MPMX20_02237 0.55 -0.1 2,349,443 - MPMX20_02237 0.56 +0.8 2,349,457 + MPMX20_02237 0.57 +0.1 2,349,457 + MPMX20_02237 0.57 +0.6 2,349,476 - MPMX20_02237 0.58 -2.4 2,349,483 + MPMX20_02237 0.59 -1.6 2,349,493 + MPMX20_02237 0.60 -1.3 2,349,493 + MPMX20_02237 0.60 -0.2 2,349,501 + MPMX20_02237 0.60 -0.6 2,349,501 + MPMX20_02237 0.60 +0.8 2,349,501 + MPMX20_02237 0.60 -0.2 2,349,501 + MPMX20_02237 0.60 -0.6 2,349,506 + MPMX20_02237 0.61 +0.3 2,349,523 - MPMX20_02237 0.62 -0.8 2,349,523 - MPMX20_02237 0.62 -0.4 2,349,524 + MPMX20_02237 0.62 +0.5 2,349,526 + MPMX20_02237 0.62 +1.1 2,349,526 + MPMX20_02237 0.62 +0.4 2,349,526 + MPMX20_02237 0.62 -0.0 2,349,526 + MPMX20_02237 0.62 +0.0 2,349,527 + MPMX20_02237 0.63 -1.3 2,349,527 + MPMX20_02237 0.63 -1.3 2,349,527 + MPMX20_02237 0.63 +0.8 2,349,527 + MPMX20_02237 0.63 -0.7 2,349,527 + MPMX20_02237 0.63 +0.4 2,349,527 + MPMX20_02237 0.63 -0.2 2,349,527 + MPMX20_02237 0.63 +1.5 2,349,527 + MPMX20_02237 0.63 -0.2 2,349,527 + MPMX20_02237 0.63 +0.7 2,349,527 + MPMX20_02237 0.63 +0.2 2,349,527 + MPMX20_02237 0.63 -1.2 2,349,527 + MPMX20_02237 0.63 +1.8 2,349,527 + MPMX20_02237 0.63 +0.2 2,349,527 + MPMX20_02237 0.63 +0.0 2,349,527 + MPMX20_02237 0.63 -0.6 2,349,534 - MPMX20_02237 0.63 +0.4 2,349,535 - MPMX20_02237 0.63 -1.0 2,349,535 - MPMX20_02237 0.63 -1.5 2,349,535 - MPMX20_02237 0.63 -1.4 2,349,537 + MPMX20_02237 0.63 -0.4 2,349,537 + MPMX20_02237 0.63 -1.4 2,349,537 + MPMX20_02237 0.63 +0.8 2,349,537 + MPMX20_02237 0.63 -0.2 2,349,537 + MPMX20_02237 0.63 +3.4 2,349,537 + MPMX20_02237 0.63 -2.4 2,349,538 + MPMX20_02237 0.63 -1.0 2,349,548 + MPMX20_02237 0.64 +0.8 2,349,548 + MPMX20_02237 0.64 -1.0 2,349,548 + MPMX20_02237 0.64 -1.2 2,349,548 + MPMX20_02237 0.64 -0.2 2,349,548 + MPMX20_02237 0.64 -0.5 2,349,548 + MPMX20_02237 0.64 +0.7 2,349,570 + MPMX20_02237 0.66 +0.4 2,349,570 + MPMX20_02237 0.66 -0.3 2,349,595 + MPMX20_02237 0.68 +1.3 2,349,595 + MPMX20_02237 0.68 -0.3 2,349,595 + MPMX20_02237 0.68 -0.4 2,349,605 + MPMX20_02237 0.69 +0.0 2,349,605 + MPMX20_02237 0.69 -2.2 2,349,630 + MPMX20_02237 0.71 -0.6 2,349,630 + MPMX20_02237 0.71 -1.2 2,349,668 + MPMX20_02237 0.74 -0.5 2,349,673 + MPMX20_02237 0.74 -0.2 2,349,678 - MPMX20_02237 0.75 -0.0 2,349,681 - MPMX20_02237 0.75 -1.2 2,349,724 - MPMX20_02237 0.79 +0.8 2,349,734 + MPMX20_02237 0.79 +0.0 2,349,742 - MPMX20_02237 0.80 -0.4
Or see this region's nucleotide sequence