Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01075

Experiment: 0.1X LB plate, 1:1 coculture with Promicromonospora thailandica SAI_039

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01073 and MPMX20_01074 overlap by 1 nucleotidesMPMX20_01074 and MPMX20_01075 are separated by 110 nucleotidesMPMX20_01075 and MPMX20_01076 are separated by 192 nucleotidesMPMX20_01076 and MPMX20_01077 are separated by 125 nucleotides MPMX20_01073: MPMX20_01073 - Nucleoid-associated protein YbaB, at 1,130,806 to 1,131,138 _01073 MPMX20_01074: MPMX20_01074 - Recombination protein RecR, at 1,131,138 to 1,131,743 _01074 MPMX20_01075: MPMX20_01075 - Chaperone protein HtpG, at 1,131,854 to 1,133,728 _01075 MPMX20_01076: MPMX20_01076 - Adenylate kinase, at 1,133,921 to 1,134,565 _01076 MPMX20_01077: MPMX20_01077 - Ferrochelatase, at 1,134,691 to 1,135,653 _01077 Position (kb) 1131 1132 1133 1134Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5at 1130.921 kb on + strand, within MPMX20_01073at 1130.931 kb on + strand, within MPMX20_01073at 1130.931 kb on + strand, within MPMX20_01073at 1130.981 kb on + strand, within MPMX20_01073at 1131.126 kb on - strandat 1131.151 kb on - strandat 1131.153 kb on - strandat 1131.198 kb on + strandat 1131.281 kb on - strand, within MPMX20_01074at 1131.341 kb on + strand, within MPMX20_01074at 1131.347 kb on + strand, within MPMX20_01074at 1131.347 kb on + strand, within MPMX20_01074at 1131.357 kb on + strand, within MPMX20_01074at 1131.383 kb on + strand, within MPMX20_01074at 1131.401 kb on - strand, within MPMX20_01074at 1131.451 kb on + strand, within MPMX20_01074at 1131.487 kb on + strand, within MPMX20_01074at 1131.487 kb on + strand, within MPMX20_01074at 1131.487 kb on + strand, within MPMX20_01074at 1131.517 kb on + strand, within MPMX20_01074at 1131.517 kb on + strand, within MPMX20_01074at 1131.517 kb on + strand, within MPMX20_01074at 1131.517 kb on + strand, within MPMX20_01074at 1131.525 kb on - strand, within MPMX20_01074at 1131.631 kb on + strand, within MPMX20_01074at 1131.694 kb on + strandat 1131.704 kb on + strandat 1131.704 kb on + strandat 1131.853 kb on + strandat 1131.996 kb on + strandat 1132.006 kb on + strandat 1132.032 kb on + strandat 1132.040 kb on - strandat 1132.045 kb on - strand, within MPMX20_01075at 1132.103 kb on + strand, within MPMX20_01075at 1132.103 kb on + strand, within MPMX20_01075at 1132.111 kb on - strand, within MPMX20_01075at 1132.181 kb on - strand, within MPMX20_01075at 1132.182 kb on + strand, within MPMX20_01075at 1132.224 kb on + strand, within MPMX20_01075at 1132.237 kb on - strand, within MPMX20_01075at 1132.241 kb on + strand, within MPMX20_01075at 1132.260 kb on + strand, within MPMX20_01075at 1132.331 kb on + strand, within MPMX20_01075at 1132.341 kb on + strand, within MPMX20_01075at 1132.383 kb on + strand, within MPMX20_01075at 1132.383 kb on + strand, within MPMX20_01075at 1132.383 kb on + strand, within MPMX20_01075at 1132.391 kb on - strand, within MPMX20_01075at 1132.391 kb on - strand, within MPMX20_01075at 1132.452 kb on + strand, within MPMX20_01075at 1132.561 kb on + strand, within MPMX20_01075at 1132.583 kb on + strand, within MPMX20_01075at 1132.618 kb on + strand, within MPMX20_01075at 1132.638 kb on + strand, within MPMX20_01075at 1132.638 kb on + strand, within MPMX20_01075at 1132.638 kb on + strand, within MPMX20_01075at 1132.669 kb on + strand, within MPMX20_01075at 1132.678 kb on - strand, within MPMX20_01075at 1132.740 kb on + strand, within MPMX20_01075at 1132.740 kb on + strand, within MPMX20_01075at 1132.740 kb on + strand, within MPMX20_01075at 1132.748 kb on - strand, within MPMX20_01075at 1132.887 kb on + strand, within MPMX20_01075at 1132.887 kb on + strand, within MPMX20_01075at 1132.887 kb on + strand, within MPMX20_01075at 1132.887 kb on + strand, within MPMX20_01075at 1132.895 kb on - strand, within MPMX20_01075at 1132.895 kb on - strand, within MPMX20_01075at 1132.895 kb on - strand, within MPMX20_01075at 1132.895 kb on - strand, within MPMX20_01075at 1132.895 kb on - strand, within MPMX20_01075at 1132.905 kb on - strand, within MPMX20_01075at 1132.917 kb on - strand, within MPMX20_01075at 1133.018 kb on + strand, within MPMX20_01075at 1133.069 kb on + strand, within MPMX20_01075at 1133.079 kb on + strand, within MPMX20_01075at 1133.079 kb on + strand, within MPMX20_01075at 1133.084 kb on + strand, within MPMX20_01075at 1133.087 kb on - strand, within MPMX20_01075at 1133.091 kb on + strand, within MPMX20_01075at 1133.097 kb on - strand, within MPMX20_01075at 1133.129 kb on + strand, within MPMX20_01075at 1133.174 kb on + strand, within MPMX20_01075at 1133.184 kb on + strand, within MPMX20_01075at 1133.197 kb on - strand, within MPMX20_01075at 1133.198 kb on - strand, within MPMX20_01075at 1133.227 kb on + strand, within MPMX20_01075at 1133.410 kb on + strand, within MPMX20_01075at 1133.581 kb on + strandat 1133.628 kb on + strandat 1133.637 kb on - strandat 1133.690 kb on - strandat 1133.741 kb on + strandat 1133.749 kb on - strandat 1133.754 kb on - strandat 1133.780 kb on - strandat 1133.782 kb on + strandat 1133.792 kb on - strandat 1134.573 kb on + strandat 1134.675 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Promicromonospora thailandica SAI_039
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1,130,921 + MPMX20_01073 0.35 +1.2
1,130,931 + MPMX20_01073 0.38 +0.1
1,130,931 + MPMX20_01073 0.38 -1.0
1,130,981 + MPMX20_01073 0.53 -1.4
1,131,126 - +1.4
1,131,151 - -1.2
1,131,153 - +0.7
1,131,198 + -1.0
1,131,281 - MPMX20_01074 0.24 -0.8
1,131,341 + MPMX20_01074 0.33 +1.2
1,131,347 + MPMX20_01074 0.34 -0.1
1,131,347 + MPMX20_01074 0.34 -1.4
1,131,357 + MPMX20_01074 0.36 -2.0
1,131,383 + MPMX20_01074 0.40 +1.4
1,131,401 - MPMX20_01074 0.43 -0.4
1,131,451 + MPMX20_01074 0.52 -1.0
1,131,487 + MPMX20_01074 0.58 +0.3
1,131,487 + MPMX20_01074 0.58 -0.8
1,131,487 + MPMX20_01074 0.58 -1.4
1,131,517 + MPMX20_01074 0.63 -0.6
1,131,517 + MPMX20_01074 0.63 -0.6
1,131,517 + MPMX20_01074 0.63 -1.7
1,131,517 + MPMX20_01074 0.63 +0.6
1,131,525 - MPMX20_01074 0.64 -0.2
1,131,631 + MPMX20_01074 0.81 +0.2
1,131,694 + -1.2
1,131,704 + -0.0
1,131,704 + -0.9
1,131,853 + +0.0
1,131,996 + -0.7
1,132,006 + -0.2
1,132,032 + +0.4
1,132,040 - +0.5
1,132,045 - MPMX20_01075 0.10 -1.2
1,132,103 + MPMX20_01075 0.13 +0.7
1,132,103 + MPMX20_01075 0.13 +4.2
1,132,111 - MPMX20_01075 0.14 +0.8
1,132,181 - MPMX20_01075 0.17 +1.5
1,132,182 + MPMX20_01075 0.17 -1.1
1,132,224 + MPMX20_01075 0.20 +0.8
1,132,237 - MPMX20_01075 0.20 +0.6
1,132,241 + MPMX20_01075 0.21 -0.8
1,132,260 + MPMX20_01075 0.22 +1.0
1,132,331 + MPMX20_01075 0.25 -1.4
1,132,341 + MPMX20_01075 0.26 +1.2
1,132,383 + MPMX20_01075 0.28 +0.1
1,132,383 + MPMX20_01075 0.28 +3.5
1,132,383 + MPMX20_01075 0.28 -0.1
1,132,391 - MPMX20_01075 0.29 -0.6
1,132,391 - MPMX20_01075 0.29 +1.0
1,132,452 + MPMX20_01075 0.32 -0.3
1,132,561 + MPMX20_01075 0.38 +1.4
1,132,583 + MPMX20_01075 0.39 -0.3
1,132,618 + MPMX20_01075 0.41 +0.3
1,132,638 + MPMX20_01075 0.42 -1.6
1,132,638 + MPMX20_01075 0.42 +1.8
1,132,638 + MPMX20_01075 0.42 -0.3
1,132,669 + MPMX20_01075 0.43 -1.5
1,132,678 - MPMX20_01075 0.44 -0.1
1,132,740 + MPMX20_01075 0.47 +1.4
1,132,740 + MPMX20_01075 0.47 -1.0
1,132,740 + MPMX20_01075 0.47 +1.7
1,132,748 - MPMX20_01075 0.48 +0.2
1,132,887 + MPMX20_01075 0.55 +0.5
1,132,887 + MPMX20_01075 0.55 -0.5
1,132,887 + MPMX20_01075 0.55 -1.1
1,132,887 + MPMX20_01075 0.55 -0.8
1,132,895 - MPMX20_01075 0.56 -2.6
1,132,895 - MPMX20_01075 0.56 +0.8
1,132,895 - MPMX20_01075 0.56 +0.2
1,132,895 - MPMX20_01075 0.56 +2.2
1,132,895 - MPMX20_01075 0.56 +0.9
1,132,905 - MPMX20_01075 0.56 -0.3
1,132,917 - MPMX20_01075 0.57 -1.5
1,133,018 + MPMX20_01075 0.62 +0.1
1,133,069 + MPMX20_01075 0.65 -0.1
1,133,079 + MPMX20_01075 0.65 -0.4
1,133,079 + MPMX20_01075 0.65 -0.9
1,133,084 + MPMX20_01075 0.66 +1.5
1,133,087 - MPMX20_01075 0.66 -0.9
1,133,091 + MPMX20_01075 0.66 -0.6
1,133,097 - MPMX20_01075 0.66 -0.8
1,133,129 + MPMX20_01075 0.68 +1.3
1,133,174 + MPMX20_01075 0.70 -0.9
1,133,184 + MPMX20_01075 0.71 +2.2
1,133,197 - MPMX20_01075 0.72 -1.7
1,133,198 - MPMX20_01075 0.72 +4.9
1,133,227 + MPMX20_01075 0.73 +0.9
1,133,410 + MPMX20_01075 0.83 -0.5
1,133,581 + -0.3
1,133,628 + -1.3
1,133,637 - +0.4
1,133,690 - +0.2
1,133,741 + +1.8
1,133,749 - -0.1
1,133,754 - -0.7
1,133,780 - +0.8
1,133,782 + -1.1
1,133,792 - +0.7
1,134,573 + +1.8
1,134,675 + +0.6

Or see this region's nucleotide sequence