Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03638

Experiment: TSB plate, 1:1 coculture with Promicromonospora thailandica SAI_039

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03637 and MPMX20_03638 are separated by 9 nucleotidesMPMX20_03638 and MPMX20_03639 are separated by 9 nucleotides MPMX20_03637: MPMX20_03637 - Sulfate adenylyltransferase subunit 1, at 3,823,690 to 3,825,114 _03637 MPMX20_03638: MPMX20_03638 - Sulfate adenylyltransferase subunit 2, at 3,825,124 to 3,826,032 _03638 MPMX20_03639: MPMX20_03639 - Siroheme synthase, at 3,826,042 to 3,827,400 _03639 Position (kb) 3825 3826 3827Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3824.194 kb on + strand, within MPMX20_03637at 3824.277 kb on - strand, within MPMX20_03637at 3824.394 kb on - strand, within MPMX20_03637at 3824.431 kb on - strand, within MPMX20_03637at 3824.441 kb on - strand, within MPMX20_03637at 3824.441 kb on - strand, within MPMX20_03637at 3824.631 kb on - strand, within MPMX20_03637at 3824.670 kb on - strand, within MPMX20_03637at 3824.753 kb on - strand, within MPMX20_03637at 3824.760 kb on + strand, within MPMX20_03637at 3824.797 kb on + strand, within MPMX20_03637at 3824.920 kb on - strand, within MPMX20_03637at 3824.933 kb on + strand, within MPMX20_03637at 3824.941 kb on - strand, within MPMX20_03637at 3825.014 kb on + strandat 3825.014 kb on + strandat 3825.027 kb on - strandat 3825.027 kb on - strandat 3825.161 kb on - strandat 3825.258 kb on + strand, within MPMX20_03638at 3825.266 kb on - strand, within MPMX20_03638at 3825.276 kb on - strand, within MPMX20_03638at 3825.295 kb on + strand, within MPMX20_03638at 3825.379 kb on + strand, within MPMX20_03638at 3825.387 kb on - strand, within MPMX20_03638at 3825.387 kb on - strand, within MPMX20_03638at 3825.387 kb on - strand, within MPMX20_03638at 3825.387 kb on - strand, within MPMX20_03638at 3825.534 kb on + strand, within MPMX20_03638at 3825.542 kb on - strand, within MPMX20_03638at 3825.592 kb on - strand, within MPMX20_03638at 3825.642 kb on - strand, within MPMX20_03638at 3825.642 kb on - strand, within MPMX20_03638at 3825.642 kb on - strand, within MPMX20_03638at 3825.642 kb on - strand, within MPMX20_03638at 3825.673 kb on + strand, within MPMX20_03638at 3825.686 kb on - strand, within MPMX20_03638at 3825.686 kb on - strand, within MPMX20_03638at 3825.715 kb on + strand, within MPMX20_03638at 3825.715 kb on + strand, within MPMX20_03638at 3825.729 kb on + strand, within MPMX20_03638at 3825.729 kb on + strand, within MPMX20_03638at 3825.737 kb on - strand, within MPMX20_03638at 3825.737 kb on - strand, within MPMX20_03638at 3825.741 kb on + strand, within MPMX20_03638at 3825.741 kb on + strand, within MPMX20_03638at 3825.741 kb on + strand, within MPMX20_03638at 3825.781 kb on + strand, within MPMX20_03638at 3825.789 kb on - strand, within MPMX20_03638at 3825.847 kb on - strand, within MPMX20_03638at 3825.898 kb on + strand, within MPMX20_03638at 3825.898 kb on + strand, within MPMX20_03638at 3825.898 kb on + strand, within MPMX20_03638at 3825.909 kb on + strand, within MPMX20_03638at 3826.003 kb on + strandat 3826.065 kb on + strandat 3826.066 kb on + strandat 3826.082 kb on - strandat 3826.085 kb on + strandat 3826.257 kb on + strand, within MPMX20_03639at 3826.265 kb on - strand, within MPMX20_03639at 3826.278 kb on + strand, within MPMX20_03639at 3826.378 kb on - strand, within MPMX20_03639at 3826.455 kb on - strand, within MPMX20_03639at 3826.484 kb on + strand, within MPMX20_03639at 3826.492 kb on - strand, within MPMX20_03639at 3826.524 kb on + strand, within MPMX20_03639at 3826.559 kb on + strand, within MPMX20_03639at 3826.559 kb on + strand, within MPMX20_03639at 3826.567 kb on - strand, within MPMX20_03639at 3826.567 kb on - strand, within MPMX20_03639at 3826.567 kb on - strand, within MPMX20_03639at 3826.636 kb on + strand, within MPMX20_03639at 3826.636 kb on + strand, within MPMX20_03639at 3826.663 kb on + strand, within MPMX20_03639at 3826.698 kb on + strand, within MPMX20_03639at 3826.778 kb on + strand, within MPMX20_03639at 3826.781 kb on - strand, within MPMX20_03639at 3826.788 kb on + strand, within MPMX20_03639at 3826.796 kb on - strand, within MPMX20_03639at 3826.829 kb on + strand, within MPMX20_03639at 3826.837 kb on - strand, within MPMX20_03639at 3826.948 kb on + strand, within MPMX20_03639at 3826.956 kb on - strand, within MPMX20_03639at 3826.956 kb on - strand, within MPMX20_03639

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Promicromonospora thailandica SAI_039
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3,824,194 + MPMX20_03637 0.35 -2.6
3,824,277 - MPMX20_03637 0.41 +0.7
3,824,394 - MPMX20_03637 0.49 +2.3
3,824,431 - MPMX20_03637 0.52 -0.5
3,824,441 - MPMX20_03637 0.53 +1.3
3,824,441 - MPMX20_03637 0.53 -1.2
3,824,631 - MPMX20_03637 0.66 -0.3
3,824,670 - MPMX20_03637 0.69 -0.4
3,824,753 - MPMX20_03637 0.75 +0.0
3,824,760 + MPMX20_03637 0.75 -3.4
3,824,797 + MPMX20_03637 0.78 -2.0
3,824,920 - MPMX20_03637 0.86 +0.8
3,824,933 + MPMX20_03637 0.87 +0.3
3,824,941 - MPMX20_03637 0.88 -1.9
3,825,014 + -2.0
3,825,014 + -1.5
3,825,027 - -0.7
3,825,027 - -2.6
3,825,161 - +1.3
3,825,258 + MPMX20_03638 0.15 -1.0
3,825,266 - MPMX20_03638 0.16 -1.3
3,825,276 - MPMX20_03638 0.17 -0.8
3,825,295 + MPMX20_03638 0.19 -2.6
3,825,379 + MPMX20_03638 0.28 +2.6
3,825,387 - MPMX20_03638 0.29 -3.1
3,825,387 - MPMX20_03638 0.29 -1.3
3,825,387 - MPMX20_03638 0.29 -1.2
3,825,387 - MPMX20_03638 0.29 -1.3
3,825,534 + MPMX20_03638 0.45 -2.7
3,825,542 - MPMX20_03638 0.46 -1.2
3,825,592 - MPMX20_03638 0.51 -1.9
3,825,642 - MPMX20_03638 0.57 +1.0
3,825,642 - MPMX20_03638 0.57 -0.8
3,825,642 - MPMX20_03638 0.57 -3.0
3,825,642 - MPMX20_03638 0.57 -2.5
3,825,673 + MPMX20_03638 0.60 -0.7
3,825,686 - MPMX20_03638 0.62 -1.2
3,825,686 - MPMX20_03638 0.62 -0.5
3,825,715 + MPMX20_03638 0.65 -1.0
3,825,715 + MPMX20_03638 0.65 -0.3
3,825,729 + MPMX20_03638 0.67 -3.2
3,825,729 + MPMX20_03638 0.67 +0.3
3,825,737 - MPMX20_03638 0.67 -0.2
3,825,737 - MPMX20_03638 0.67 -1.5
3,825,741 + MPMX20_03638 0.68 +0.3
3,825,741 + MPMX20_03638 0.68 -1.0
3,825,741 + MPMX20_03638 0.68 -3.6
3,825,781 + MPMX20_03638 0.72 -1.5
3,825,789 - MPMX20_03638 0.73 -2.8
3,825,847 - MPMX20_03638 0.80 -1.4
3,825,898 + MPMX20_03638 0.85 -2.4
3,825,898 + MPMX20_03638 0.85 +0.5
3,825,898 + MPMX20_03638 0.85 +1.3
3,825,909 + MPMX20_03638 0.86 -2.3
3,826,003 + -0.5
3,826,065 + -1.1
3,826,066 + +1.3
3,826,082 - +1.4
3,826,085 + -1.7
3,826,257 + MPMX20_03639 0.16 +0.2
3,826,265 - MPMX20_03639 0.16 -0.4
3,826,278 + MPMX20_03639 0.17 -1.4
3,826,378 - MPMX20_03639 0.25 +2.3
3,826,455 - MPMX20_03639 0.30 -1.7
3,826,484 + MPMX20_03639 0.33 -1.5
3,826,492 - MPMX20_03639 0.33 -0.7
3,826,524 + MPMX20_03639 0.35 +1.1
3,826,559 + MPMX20_03639 0.38 +0.7
3,826,559 + MPMX20_03639 0.38 +0.3
3,826,567 - MPMX20_03639 0.39 -0.2
3,826,567 - MPMX20_03639 0.39 +3.7
3,826,567 - MPMX20_03639 0.39 +1.7
3,826,636 + MPMX20_03639 0.44 -1.5
3,826,636 + MPMX20_03639 0.44 -1.0
3,826,663 + MPMX20_03639 0.46 -1.0
3,826,698 + MPMX20_03639 0.48 -0.3
3,826,778 + MPMX20_03639 0.54 -2.9
3,826,781 - MPMX20_03639 0.54 -0.2
3,826,788 + MPMX20_03639 0.55 -0.5
3,826,796 - MPMX20_03639 0.55 -1.5
3,826,829 + MPMX20_03639 0.58 -1.0
3,826,837 - MPMX20_03639 0.58 -0.4
3,826,948 + MPMX20_03639 0.67 +1.3
3,826,956 - MPMX20_03639 0.67 -0.1
3,826,956 - MPMX20_03639 0.67 +0.7

Or see this region's nucleotide sequence