Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS00835

Experiment: diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day4

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

No fitness data for strains within 77,365 to 81,272
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500 ntHMPREF1058_RS00840 and HMPREF1058_RS00835 overlap by 4 nucleotidesHMPREF1058_RS00835 and HMPREF1058_RS00830 are separated by 12 nucleotides HMPREF1058_RS00840: HMPREF1058_RS00840 - glycoside hydrolase family 28 protein, at 76,980 to 78,368 _RS00840 HMPREF1058_RS00835: HMPREF1058_RS00835 - rhamnogalacturonan lyase, at 78,365 to 80,272 _RS00835 HMPREF1058_RS00830: HMPREF1058_RS00830 - glycoside hydrolase family 88 protein, at 80,285 to 81,700 _RS00830