Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04534

Experiment: 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04532 and MPMX20_04533 are separated by 48 nucleotidesMPMX20_04533 and MPMX20_04534 are separated by 200 nucleotidesMPMX20_04534 and MPMX20_04535 are separated by 119 nucleotides MPMX20_04532: MPMX20_04532 - Met repressor, at 4,745,725 to 4,746,042 _04532 MPMX20_04533: MPMX20_04533 - 50S ribosomal protein L31, at 4,746,091 to 4,746,303 _04533 MPMX20_04534: MPMX20_04534 - Primosomal protein N', at 4,746,504 to 4,748,699 _04534 MPMX20_04535: MPMX20_04535 - HTH-type transcriptional repressor CytR, at 4,748,819 to 4,749,844 _04535 Position (kb) 4746 4747 4748 4749Strain fitness (log2 ratio) -2 -1 0 1 2at 4745.633 kb on - strandat 4745.637 kb on + strandat 4745.667 kb on - strandat 4745.710 kb on + strandat 4745.710 kb on + strandat 4745.820 kb on - strand, within MPMX20_04532at 4745.893 kb on + strand, within MPMX20_04532at 4745.953 kb on - strand, within MPMX20_04532at 4745.953 kb on - strand, within MPMX20_04532at 4746.002 kb on - strand, within MPMX20_04532at 4746.117 kb on - strand, within MPMX20_04533at 4746.464 kb on + strandat 4748.695 kb on + strandat 4748.703 kb on - strandat 4748.703 kb on - strandat 4748.891 kb on + strandat 4748.899 kb on - strandat 4748.899 kb on - strandat 4748.943 kb on + strand, within MPMX20_04535at 4748.945 kb on - strand, within MPMX20_04535at 4748.946 kb on + strand, within MPMX20_04535at 4749.002 kb on - strand, within MPMX20_04535at 4749.026 kb on + strand, within MPMX20_04535at 4749.048 kb on + strand, within MPMX20_04535at 4749.064 kb on - strand, within MPMX20_04535at 4749.091 kb on - strand, within MPMX20_04535at 4749.109 kb on - strand, within MPMX20_04535at 4749.145 kb on - strand, within MPMX20_04535at 4749.180 kb on - strand, within MPMX20_04535at 4749.210 kb on + strand, within MPMX20_04535at 4749.242 kb on - strand, within MPMX20_04535at 4749.252 kb on + strand, within MPMX20_04535at 4749.323 kb on - strand, within MPMX20_04535at 4749.351 kb on + strand, within MPMX20_04535at 4749.502 kb on - strand, within MPMX20_04535at 4749.532 kb on - strand, within MPMX20_04535at 4749.569 kb on + strand, within MPMX20_04535at 4749.623 kb on - strand, within MPMX20_04535at 4749.694 kb on + strand, within MPMX20_04535

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196
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4,745,633 - +0.0
4,745,637 + +1.1
4,745,667 - -0.3
4,745,710 + -0.3
4,745,710 + -2.5
4,745,820 - MPMX20_04532 0.30 +1.6
4,745,893 + MPMX20_04532 0.53 -1.2
4,745,953 - MPMX20_04532 0.72 -1.3
4,745,953 - MPMX20_04532 0.72 +0.7
4,746,002 - MPMX20_04532 0.87 +0.0
4,746,117 - MPMX20_04533 0.12 +2.1
4,746,464 + -0.3
4,748,695 + -0.2
4,748,703 - +1.2
4,748,703 - +0.6
4,748,891 + -1.0
4,748,899 - +2.3
4,748,899 - -0.1
4,748,943 + MPMX20_04535 0.12 -1.3
4,748,945 - MPMX20_04535 0.12 -1.2
4,748,946 + MPMX20_04535 0.12 -0.6
4,749,002 - MPMX20_04535 0.18 +0.2
4,749,026 + MPMX20_04535 0.20 -0.2
4,749,048 + MPMX20_04535 0.22 +0.4
4,749,064 - MPMX20_04535 0.24 -0.4
4,749,091 - MPMX20_04535 0.27 -0.3
4,749,109 - MPMX20_04535 0.28 +1.0
4,749,145 - MPMX20_04535 0.32 -0.4
4,749,180 - MPMX20_04535 0.35 -1.7
4,749,210 + MPMX20_04535 0.38 +0.3
4,749,242 - MPMX20_04535 0.41 -0.3
4,749,252 + MPMX20_04535 0.42 -2.4
4,749,323 - MPMX20_04535 0.49 -1.4
4,749,351 + MPMX20_04535 0.52 -1.7
4,749,502 - MPMX20_04535 0.67 +2.1
4,749,532 - MPMX20_04535 0.69 +1.0
4,749,569 + MPMX20_04535 0.73 -1.4
4,749,623 - MPMX20_04535 0.78 +0.1
4,749,694 + MPMX20_04535 0.85 -0.7

Or see this region's nucleotide sequence