Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04493

Experiment: 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04492 and MPMX20_04493 are separated by 6 nucleotidesMPMX20_04493 and MPMX20_04494 are separated by 48 nucleotides MPMX20_04492: MPMX20_04492 - ATP-dependent RNA helicase RhlB, at 4,696,889 to 4,698,154 _04492 MPMX20_04493: MPMX20_04493 - Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase, at 4,698,161 to 4,699,645 _04493 MPMX20_04494: MPMX20_04494 - ATP-dependent DNA helicase Rep, at 4,699,694 to 4,701,718 _04494 Position (kb) 4698 4699 4700Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4697.180 kb on + strand, within MPMX20_04492at 4697.188 kb on - strand, within MPMX20_04492at 4697.188 kb on - strand, within MPMX20_04492at 4697.209 kb on + strand, within MPMX20_04492at 4697.239 kb on + strand, within MPMX20_04492at 4697.247 kb on - strand, within MPMX20_04492at 4697.331 kb on + strand, within MPMX20_04492at 4697.346 kb on + strand, within MPMX20_04492at 4697.346 kb on + strand, within MPMX20_04492at 4697.353 kb on + strand, within MPMX20_04492at 4697.353 kb on + strand, within MPMX20_04492at 4697.476 kb on + strand, within MPMX20_04492at 4697.583 kb on + strand, within MPMX20_04492at 4697.596 kb on - strand, within MPMX20_04492at 4697.647 kb on + strand, within MPMX20_04492at 4697.727 kb on + strand, within MPMX20_04492at 4697.821 kb on - strand, within MPMX20_04492at 4697.877 kb on + strand, within MPMX20_04492at 4697.879 kb on - strand, within MPMX20_04492at 4697.907 kb on + strand, within MPMX20_04492at 4697.916 kb on + strand, within MPMX20_04492at 4698.130 kb on + strandat 4698.176 kb on - strandat 4698.246 kb on + strandat 4698.293 kb on + strandat 4698.293 kb on + strandat 4698.301 kb on - strandat 4698.301 kb on - strandat 4698.301 kb on - strandat 4698.318 kb on + strand, within MPMX20_04493at 4698.321 kb on - strand, within MPMX20_04493at 4698.349 kb on + strand, within MPMX20_04493at 4698.381 kb on - strand, within MPMX20_04493at 4698.397 kb on - strand, within MPMX20_04493at 4698.541 kb on - strand, within MPMX20_04493at 4698.637 kb on - strand, within MPMX20_04493at 4698.660 kb on + strand, within MPMX20_04493at 4698.680 kb on - strand, within MPMX20_04493at 4698.742 kb on - strand, within MPMX20_04493at 4698.746 kb on + strand, within MPMX20_04493at 4698.793 kb on + strand, within MPMX20_04493at 4698.835 kb on + strand, within MPMX20_04493at 4698.835 kb on + strand, within MPMX20_04493at 4698.843 kb on - strand, within MPMX20_04493at 4698.843 kb on - strand, within MPMX20_04493at 4698.843 kb on - strand, within MPMX20_04493at 4698.874 kb on + strand, within MPMX20_04493at 4698.881 kb on - strand, within MPMX20_04493at 4699.016 kb on - strand, within MPMX20_04493at 4699.040 kb on + strand, within MPMX20_04493at 4699.045 kb on + strand, within MPMX20_04493at 4699.048 kb on - strand, within MPMX20_04493at 4699.053 kb on - strand, within MPMX20_04493at 4699.157 kb on - strand, within MPMX20_04493at 4699.196 kb on + strand, within MPMX20_04493at 4699.230 kb on + strand, within MPMX20_04493at 4699.241 kb on - strand, within MPMX20_04493at 4699.277 kb on + strand, within MPMX20_04493at 4699.331 kb on - strand, within MPMX20_04493at 4699.364 kb on - strand, within MPMX20_04493at 4699.380 kb on - strand, within MPMX20_04493at 4699.380 kb on - strand, within MPMX20_04493at 4699.388 kb on - strand, within MPMX20_04493at 4699.423 kb on + strand, within MPMX20_04493at 4699.513 kb on + strandat 4699.682 kb on - strandat 4699.814 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196
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4,697,180 + MPMX20_04492 0.23 -0.2
4,697,188 - MPMX20_04492 0.24 +1.7
4,697,188 - MPMX20_04492 0.24 -0.6
4,697,209 + MPMX20_04492 0.25 -0.6
4,697,239 + MPMX20_04492 0.28 +0.6
4,697,247 - MPMX20_04492 0.28 +0.0
4,697,331 + MPMX20_04492 0.35 -0.5
4,697,346 + MPMX20_04492 0.36 -0.4
4,697,346 + MPMX20_04492 0.36 -1.6
4,697,353 + MPMX20_04492 0.37 +1.0
4,697,353 + MPMX20_04492 0.37 -0.3
4,697,476 + MPMX20_04492 0.46 +2.6
4,697,583 + MPMX20_04492 0.55 +0.1
4,697,596 - MPMX20_04492 0.56 -1.5
4,697,647 + MPMX20_04492 0.60 +0.6
4,697,727 + MPMX20_04492 0.66 -1.1
4,697,821 - MPMX20_04492 0.74 -0.9
4,697,877 + MPMX20_04492 0.78 -0.5
4,697,879 - MPMX20_04492 0.78 +0.2
4,697,907 + MPMX20_04492 0.80 +0.3
4,697,916 + MPMX20_04492 0.81 -1.3
4,698,130 + -0.3
4,698,176 - -1.1
4,698,246 + -2.4
4,698,293 + +0.3
4,698,293 + -3.0
4,698,301 - -1.6
4,698,301 - -0.3
4,698,301 - -1.0
4,698,318 + MPMX20_04493 0.11 -1.7
4,698,321 - MPMX20_04493 0.11 -2.1
4,698,349 + MPMX20_04493 0.13 -0.2
4,698,381 - MPMX20_04493 0.15 -1.9
4,698,397 - MPMX20_04493 0.16 -0.3
4,698,541 - MPMX20_04493 0.26 +1.6
4,698,637 - MPMX20_04493 0.32 -3.1
4,698,660 + MPMX20_04493 0.34 -0.4
4,698,680 - MPMX20_04493 0.35 -1.5
4,698,742 - MPMX20_04493 0.39 -1.9
4,698,746 + MPMX20_04493 0.39 -1.0
4,698,793 + MPMX20_04493 0.43 -1.5
4,698,835 + MPMX20_04493 0.45 -0.4
4,698,835 + MPMX20_04493 0.45 -0.6
4,698,843 - MPMX20_04493 0.46 +2.6
4,698,843 - MPMX20_04493 0.46 -0.4
4,698,843 - MPMX20_04493 0.46 -2.1
4,698,874 + MPMX20_04493 0.48 -1.6
4,698,881 - MPMX20_04493 0.48 -0.9
4,699,016 - MPMX20_04493 0.58 -1.4
4,699,040 + MPMX20_04493 0.59 -0.9
4,699,045 + MPMX20_04493 0.60 +2.0
4,699,048 - MPMX20_04493 0.60 -1.7
4,699,053 - MPMX20_04493 0.60 +2.6
4,699,157 - MPMX20_04493 0.67 +0.3
4,699,196 + MPMX20_04493 0.70 +2.0
4,699,230 + MPMX20_04493 0.72 -2.1
4,699,241 - MPMX20_04493 0.73 -2.9
4,699,277 + MPMX20_04493 0.75 -0.9
4,699,331 - MPMX20_04493 0.79 -1.9
4,699,364 - MPMX20_04493 0.81 -0.7
4,699,380 - MPMX20_04493 0.82 -0.2
4,699,380 - MPMX20_04493 0.82 -0.6
4,699,388 - MPMX20_04493 0.83 +0.6
4,699,423 + MPMX20_04493 0.85 -1.2
4,699,513 + -0.2
4,699,682 - +0.3
4,699,814 - -0.7

Or see this region's nucleotide sequence