Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03931

Experiment: 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03929 and MPMX20_03930 overlap by 4 nucleotidesMPMX20_03930 and MPMX20_03931 overlap by 4 nucleotidesMPMX20_03931 and MPMX20_03932 are separated by 98 nucleotidesMPMX20_03932 and MPMX20_03933 overlap by 23 nucleotides MPMX20_03929: MPMX20_03929 - hypothetical protein, at 4,135,600 to 4,136,307 _03929 MPMX20_03930: MPMX20_03930 - hypothetical protein, at 4,136,304 to 4,136,810 _03930 MPMX20_03931: MPMX20_03931 - hypothetical protein, at 4,136,807 to 4,137,259 _03931 MPMX20_03932: MPMX20_03932 - hypothetical protein, at 4,137,358 to 4,137,555 _03932 MPMX20_03933: MPMX20_03933 - hypothetical protein, at 4,137,533 to 4,138,261 _03933 Position (kb) 4136 4137 4138Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4135.853 kb on + strand, within MPMX20_03929at 4135.853 kb on + strand, within MPMX20_03929at 4135.853 kb on + strand, within MPMX20_03929at 4135.861 kb on - strand, within MPMX20_03929at 4135.880 kb on - strand, within MPMX20_03929at 4135.884 kb on + strand, within MPMX20_03929at 4135.892 kb on - strand, within MPMX20_03929at 4135.892 kb on - strand, within MPMX20_03929at 4136.003 kb on - strand, within MPMX20_03929at 4136.097 kb on - strand, within MPMX20_03929at 4136.124 kb on + strand, within MPMX20_03929at 4136.135 kb on + strand, within MPMX20_03929at 4136.243 kb on + strandat 4136.246 kb on - strandat 4136.300 kb on - strandat 4136.336 kb on + strandat 4136.358 kb on + strand, within MPMX20_03930at 4136.368 kb on + strand, within MPMX20_03930at 4136.376 kb on - strand, within MPMX20_03930at 4136.376 kb on - strand, within MPMX20_03930at 4136.447 kb on + strand, within MPMX20_03930at 4136.549 kb on + strand, within MPMX20_03930at 4136.560 kb on - strand, within MPMX20_03930at 4136.637 kb on + strand, within MPMX20_03930at 4136.637 kb on + strand, within MPMX20_03930at 4136.637 kb on + strand, within MPMX20_03930at 4136.637 kb on + strand, within MPMX20_03930at 4136.637 kb on + strand, within MPMX20_03930at 4136.645 kb on - strand, within MPMX20_03930at 4136.645 kb on - strand, within MPMX20_03930at 4136.645 kb on - strand, within MPMX20_03930at 4136.645 kb on - strand, within MPMX20_03930at 4136.645 kb on - strand, within MPMX20_03930at 4136.694 kb on - strand, within MPMX20_03930at 4136.694 kb on - strand, within MPMX20_03930at 4136.754 kb on + strand, within MPMX20_03930at 4136.798 kb on + strandat 4136.857 kb on + strand, within MPMX20_03931at 4136.900 kb on + strand, within MPMX20_03931at 4136.916 kb on + strand, within MPMX20_03931at 4136.934 kb on - strand, within MPMX20_03931at 4136.944 kb on + strand, within MPMX20_03931at 4136.944 kb on + strand, within MPMX20_03931at 4136.948 kb on + strand, within MPMX20_03931at 4136.952 kb on - strand, within MPMX20_03931at 4136.982 kb on + strand, within MPMX20_03931at 4137.057 kb on - strand, within MPMX20_03931at 4137.093 kb on + strand, within MPMX20_03931at 4137.101 kb on - strand, within MPMX20_03931at 4137.127 kb on + strand, within MPMX20_03931at 4137.135 kb on - strand, within MPMX20_03931at 4137.160 kb on - strand, within MPMX20_03931at 4137.187 kb on + strand, within MPMX20_03931at 4137.188 kb on + strand, within MPMX20_03931at 4137.193 kb on + strand, within MPMX20_03931at 4137.193 kb on + strand, within MPMX20_03931at 4137.196 kb on - strand, within MPMX20_03931at 4137.198 kb on + strand, within MPMX20_03931at 4137.201 kb on - strand, within MPMX20_03931at 4137.298 kb on - strandat 4137.300 kb on + strandat 4137.308 kb on - strandat 4137.313 kb on - strandat 4137.331 kb on - strandat 4137.346 kb on - strandat 4137.356 kb on + strandat 4137.356 kb on + strandat 4137.356 kb on + strandat 4137.356 kb on + strandat 4137.356 kb on + strandat 4137.356 kb on + strandat 4137.356 kb on + strandat 4137.364 kb on - strandat 4137.364 kb on - strandat 4137.364 kb on - strandat 4137.364 kb on - strandat 4137.509 kb on + strand, within MPMX20_03932at 4137.514 kb on - strand, within MPMX20_03932at 4137.519 kb on + strand, within MPMX20_03932at 4137.527 kb on - strand, within MPMX20_03932at 4137.527 kb on - strand, within MPMX20_03932at 4137.570 kb on - strandat 4137.584 kb on - strandat 4137.589 kb on + strandat 4137.599 kb on - strandat 4137.609 kb on + strand, within MPMX20_03933at 4137.772 kb on - strand, within MPMX20_03933at 4137.799 kb on + strand, within MPMX20_03933at 4137.805 kb on - strand, within MPMX20_03933at 4137.807 kb on - strand, within MPMX20_03933at 4137.823 kb on + strand, within MPMX20_03933at 4137.858 kb on + strand, within MPMX20_03933at 4137.858 kb on + strand, within MPMX20_03933at 4137.858 kb on + strand, within MPMX20_03933at 4137.858 kb on + strand, within MPMX20_03933at 4137.858 kb on + strand, within MPMX20_03933at 4137.863 kb on + strand, within MPMX20_03933at 4137.866 kb on - strand, within MPMX20_03933at 4137.866 kb on - strand, within MPMX20_03933at 4137.866 kb on - strand, within MPMX20_03933at 4137.871 kb on - strand, within MPMX20_03933at 4137.921 kb on + strand, within MPMX20_03933at 4137.929 kb on - strand, within MPMX20_03933at 4137.960 kb on + strand, within MPMX20_03933at 4137.960 kb on + strand, within MPMX20_03933at 4137.968 kb on - strand, within MPMX20_03933at 4137.979 kb on + strand, within MPMX20_03933at 4138.028 kb on - strand, within MPMX20_03933at 4138.028 kb on - strand, within MPMX20_03933at 4138.028 kb on - strand, within MPMX20_03933at 4138.028 kb on - strand, within MPMX20_03933at 4138.046 kb on + strand, within MPMX20_03933at 4138.054 kb on - strand, within MPMX20_03933at 4138.081 kb on - strand, within MPMX20_03933at 4138.086 kb on + strand, within MPMX20_03933at 4138.092 kb on + strand, within MPMX20_03933at 4138.231 kb on + strandat 4138.233 kb on + strandat 4138.239 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196
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4,135,853 + MPMX20_03929 0.36 +0.6
4,135,853 + MPMX20_03929 0.36 +0.5
4,135,853 + MPMX20_03929 0.36 +0.8
4,135,861 - MPMX20_03929 0.37 -0.5
4,135,880 - MPMX20_03929 0.40 -1.2
4,135,884 + MPMX20_03929 0.40 -0.3
4,135,892 - MPMX20_03929 0.41 -2.1
4,135,892 - MPMX20_03929 0.41 -1.1
4,136,003 - MPMX20_03929 0.57 +1.5
4,136,097 - MPMX20_03929 0.70 +1.5
4,136,124 + MPMX20_03929 0.74 +1.9
4,136,135 + MPMX20_03929 0.76 +0.6
4,136,243 + -0.7
4,136,246 - -0.8
4,136,300 - -1.2
4,136,336 + -1.4
4,136,358 + MPMX20_03930 0.11 +0.9
4,136,368 + MPMX20_03930 0.13 -2.1
4,136,376 - MPMX20_03930 0.14 -0.6
4,136,376 - MPMX20_03930 0.14 -1.8
4,136,447 + MPMX20_03930 0.28 +0.2
4,136,549 + MPMX20_03930 0.48 +1.4
4,136,560 - MPMX20_03930 0.50 -0.3
4,136,637 + MPMX20_03930 0.66 -1.4
4,136,637 + MPMX20_03930 0.66 -0.3
4,136,637 + MPMX20_03930 0.66 -1.2
4,136,637 + MPMX20_03930 0.66 -0.3
4,136,637 + MPMX20_03930 0.66 +0.3
4,136,645 - MPMX20_03930 0.67 -0.3
4,136,645 - MPMX20_03930 0.67 +0.5
4,136,645 - MPMX20_03930 0.67 +1.5
4,136,645 - MPMX20_03930 0.67 +0.5
4,136,645 - MPMX20_03930 0.67 -1.9
4,136,694 - MPMX20_03930 0.77 +0.9
4,136,694 - MPMX20_03930 0.77 +0.9
4,136,754 + MPMX20_03930 0.89 -2.5
4,136,798 + -0.4
4,136,857 + MPMX20_03931 0.11 -0.2
4,136,900 + MPMX20_03931 0.21 +1.5
4,136,916 + MPMX20_03931 0.24 -1.9
4,136,934 - MPMX20_03931 0.28 -0.1
4,136,944 + MPMX20_03931 0.30 -0.7
4,136,944 + MPMX20_03931 0.30 -0.3
4,136,948 + MPMX20_03931 0.31 -1.5
4,136,952 - MPMX20_03931 0.32 +0.5
4,136,982 + MPMX20_03931 0.39 -1.7
4,137,057 - MPMX20_03931 0.55 -0.1
4,137,093 + MPMX20_03931 0.63 +0.7
4,137,101 - MPMX20_03931 0.65 +1.1
4,137,127 + MPMX20_03931 0.71 +0.6
4,137,135 - MPMX20_03931 0.72 -2.1
4,137,160 - MPMX20_03931 0.78 -1.7
4,137,187 + MPMX20_03931 0.84 -0.5
4,137,188 + MPMX20_03931 0.84 -0.8
4,137,193 + MPMX20_03931 0.85 -1.1
4,137,193 + MPMX20_03931 0.85 -0.5
4,137,196 - MPMX20_03931 0.86 -1.2
4,137,198 + MPMX20_03931 0.86 -2.7
4,137,201 - MPMX20_03931 0.87 +0.2
4,137,298 - -3.7
4,137,300 + -1.8
4,137,308 - -2.0
4,137,313 - -2.5
4,137,331 - -3.1
4,137,346 - -0.1
4,137,356 + -1.2
4,137,356 + -1.0
4,137,356 + -0.3
4,137,356 + -1.4
4,137,356 + -2.2
4,137,356 + +0.0
4,137,356 + -1.1
4,137,364 - -0.2
4,137,364 - -1.5
4,137,364 - -0.1
4,137,364 - -0.3
4,137,509 + MPMX20_03932 0.76 -0.3
4,137,514 - MPMX20_03932 0.79 -1.9
4,137,519 + MPMX20_03932 0.81 +1.0
4,137,527 - MPMX20_03932 0.85 -0.8
4,137,527 - MPMX20_03932 0.85 +0.9
4,137,570 - -0.3
4,137,584 - -2.8
4,137,589 + +0.2
4,137,599 - -1.4
4,137,609 + MPMX20_03933 0.10 +1.8
4,137,772 - MPMX20_03933 0.33 -0.9
4,137,799 + MPMX20_03933 0.36 -1.3
4,137,805 - MPMX20_03933 0.37 +0.4
4,137,807 - MPMX20_03933 0.38 +0.2
4,137,823 + MPMX20_03933 0.40 +0.3
4,137,858 + MPMX20_03933 0.45 -1.0
4,137,858 + MPMX20_03933 0.45 -0.7
4,137,858 + MPMX20_03933 0.45 -2.0
4,137,858 + MPMX20_03933 0.45 +1.5
4,137,858 + MPMX20_03933 0.45 -1.8
4,137,863 + MPMX20_03933 0.45 +0.0
4,137,866 - MPMX20_03933 0.46 -2.7
4,137,866 - MPMX20_03933 0.46 +0.2
4,137,866 - MPMX20_03933 0.46 -0.0
4,137,871 - MPMX20_03933 0.46 -1.1
4,137,921 + MPMX20_03933 0.53 -1.0
4,137,929 - MPMX20_03933 0.54 +1.2
4,137,960 + MPMX20_03933 0.59 +0.4
4,137,960 + MPMX20_03933 0.59 -1.0
4,137,968 - MPMX20_03933 0.60 -0.5
4,137,979 + MPMX20_03933 0.61 +1.5
4,138,028 - MPMX20_03933 0.68 -0.1
4,138,028 - MPMX20_03933 0.68 -1.5
4,138,028 - MPMX20_03933 0.68 +0.6
4,138,028 - MPMX20_03933 0.68 -2.0
4,138,046 + MPMX20_03933 0.70 -1.6
4,138,054 - MPMX20_03933 0.71 -1.0
4,138,081 - MPMX20_03933 0.75 +0.3
4,138,086 + MPMX20_03933 0.76 -0.8
4,138,092 + MPMX20_03933 0.77 -1.6
4,138,231 + -1.2
4,138,233 + +0.2
4,138,239 - -1.5

Or see this region's nucleotide sequence