Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03844

Experiment: 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03842 and MPMX20_03843 are separated by 160 nucleotidesMPMX20_03843 and MPMX20_03844 are separated by 80 nucleotidesMPMX20_03844 and MPMX20_03845 are separated by 244 nucleotides MPMX20_03842: MPMX20_03842 - Disulfide-bond oxidoreductase YghU, at 4,048,230 to 4,049,099 _03842 MPMX20_03843: MPMX20_03843 - hypothetical protein, at 4,049,260 to 4,049,592 _03843 MPMX20_03844: MPMX20_03844 - hypothetical protein, at 4,049,673 to 4,051,220 _03844 MPMX20_03845: MPMX20_03845 - L-glyceraldehyde 3-phosphate reductase, at 4,051,465 to 4,052,505 _03845 Position (kb) 4049 4050 4051 4052Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 4048.747 kb on - strand, within MPMX20_03842at 4048.763 kb on - strand, within MPMX20_03842at 4048.845 kb on - strand, within MPMX20_03842at 4048.850 kb on - strand, within MPMX20_03842at 4048.890 kb on + strand, within MPMX20_03842at 4048.890 kb on + strand, within MPMX20_03842at 4048.898 kb on - strand, within MPMX20_03842at 4048.904 kb on + strand, within MPMX20_03842at 4048.912 kb on - strand, within MPMX20_03842at 4048.983 kb on + strand, within MPMX20_03842at 4049.081 kb on + strandat 4049.325 kb on + strand, within MPMX20_03843at 4049.454 kb on + strand, within MPMX20_03843at 4049.454 kb on + strand, within MPMX20_03843at 4049.462 kb on - strand, within MPMX20_03843at 4049.462 kb on - strand, within MPMX20_03843at 4049.462 kb on - strand, within MPMX20_03843at 4049.480 kb on - strand, within MPMX20_03843at 4049.486 kb on + strand, within MPMX20_03843at 4049.486 kb on + strand, within MPMX20_03843at 4049.521 kb on + strand, within MPMX20_03843at 4049.529 kb on - strand, within MPMX20_03843at 4049.560 kb on - strandat 4049.659 kb on + strandat 4049.754 kb on - strandat 4049.754 kb on - strandat 4049.754 kb on - strandat 4049.778 kb on - strandat 4049.840 kb on + strand, within MPMX20_03844at 4049.840 kb on + strand, within MPMX20_03844at 4049.848 kb on - strand, within MPMX20_03844at 4049.945 kb on + strand, within MPMX20_03844at 4050.001 kb on + strand, within MPMX20_03844at 4050.088 kb on + strand, within MPMX20_03844at 4050.165 kb on + strand, within MPMX20_03844at 4050.167 kb on + strand, within MPMX20_03844at 4050.204 kb on - strand, within MPMX20_03844at 4050.255 kb on + strand, within MPMX20_03844at 4050.255 kb on + strand, within MPMX20_03844at 4050.291 kb on + strand, within MPMX20_03844at 4050.294 kb on + strand, within MPMX20_03844at 4050.302 kb on + strand, within MPMX20_03844at 4050.302 kb on + strand, within MPMX20_03844at 4050.302 kb on + strand, within MPMX20_03844at 4050.310 kb on - strand, within MPMX20_03844at 4050.336 kb on + strand, within MPMX20_03844at 4050.354 kb on + strand, within MPMX20_03844at 4050.389 kb on - strand, within MPMX20_03844at 4050.427 kb on - strand, within MPMX20_03844at 4050.429 kb on + strand, within MPMX20_03844at 4050.430 kb on - strand, within MPMX20_03844at 4050.460 kb on + strand, within MPMX20_03844at 4050.482 kb on + strand, within MPMX20_03844at 4050.528 kb on + strand, within MPMX20_03844at 4050.593 kb on + strand, within MPMX20_03844at 4050.604 kb on + strand, within MPMX20_03844at 4050.612 kb on - strand, within MPMX20_03844at 4050.621 kb on - strand, within MPMX20_03844at 4050.675 kb on + strand, within MPMX20_03844at 4050.675 kb on + strand, within MPMX20_03844at 4050.683 kb on - strand, within MPMX20_03844at 4050.683 kb on - strand, within MPMX20_03844at 4050.686 kb on + strand, within MPMX20_03844at 4050.694 kb on - strand, within MPMX20_03844at 4050.701 kb on - strand, within MPMX20_03844at 4050.720 kb on + strand, within MPMX20_03844at 4050.747 kb on - strand, within MPMX20_03844at 4050.753 kb on + strand, within MPMX20_03844at 4050.764 kb on + strand, within MPMX20_03844at 4050.766 kb on - strand, within MPMX20_03844at 4050.766 kb on - strand, within MPMX20_03844at 4050.800 kb on - strand, within MPMX20_03844at 4050.803 kb on - strand, within MPMX20_03844at 4050.807 kb on - strand, within MPMX20_03844at 4050.832 kb on + strand, within MPMX20_03844at 4050.840 kb on - strand, within MPMX20_03844at 4050.840 kb on - strand, within MPMX20_03844at 4050.854 kb on - strand, within MPMX20_03844at 4050.873 kb on - strand, within MPMX20_03844at 4050.899 kb on + strand, within MPMX20_03844at 4050.899 kb on + strand, within MPMX20_03844at 4050.899 kb on + strand, within MPMX20_03844at 4050.899 kb on + strand, within MPMX20_03844at 4050.945 kb on + strand, within MPMX20_03844at 4051.042 kb on + strand, within MPMX20_03844at 4051.042 kb on + strand, within MPMX20_03844at 4051.042 kb on + strand, within MPMX20_03844at 4051.042 kb on + strand, within MPMX20_03844at 4051.050 kb on - strand, within MPMX20_03844at 4051.050 kb on - strand, within MPMX20_03844at 4051.050 kb on - strand, within MPMX20_03844at 4051.064 kb on - strand, within MPMX20_03844at 4051.064 kb on - strand, within MPMX20_03844at 4051.064 kb on - strand, within MPMX20_03844at 4051.091 kb on + strandat 4051.120 kb on + strandat 4051.128 kb on - strandat 4051.129 kb on + strandat 4051.136 kb on + strandat 4051.240 kb on + strandat 4051.267 kb on - strandat 4051.329 kb on + strandat 4051.386 kb on - strandat 4051.413 kb on + strandat 4051.461 kb on - strandat 4051.476 kb on + strandat 4051.476 kb on + strandat 4051.476 kb on + strandat 4051.476 kb on + strandat 4051.476 kb on + strandat 4051.476 kb on + strandat 4051.476 kb on + strandat 4051.476 kb on + strandat 4051.476 kb on + strandat 4051.476 kb on + strandat 4051.476 kb on + strandat 4051.476 kb on + strandat 4051.476 kb on + strandat 4051.476 kb on + strandat 4051.476 kb on + strandat 4051.476 kb on + strandat 4051.476 kb on + strandat 4051.476 kb on + strandat 4051.476 kb on + strandat 4051.484 kb on - strandat 4051.484 kb on - strandat 4051.484 kb on - strandat 4051.484 kb on - strandat 4051.484 kb on - strandat 4051.484 kb on - strandat 4051.484 kb on - strandat 4051.484 kb on - strandat 4051.484 kb on - strandat 4051.484 kb on - strandat 4051.484 kb on - strandat 4051.484 kb on - strandat 4051.484 kb on - strandat 4051.484 kb on - strandat 4051.484 kb on - strandat 4051.484 kb on - strandat 4051.555 kb on + strandat 4051.577 kb on + strand, within MPMX20_03845at 4051.611 kb on + strand, within MPMX20_03845at 4051.631 kb on + strand, within MPMX20_03845at 4051.639 kb on - strand, within MPMX20_03845at 4051.639 kb on - strand, within MPMX20_03845at 4051.639 kb on - strand, within MPMX20_03845at 4051.639 kb on - strand, within MPMX20_03845at 4051.648 kb on - strand, within MPMX20_03845at 4051.759 kb on + strand, within MPMX20_03845at 4051.759 kb on + strand, within MPMX20_03845at 4051.769 kb on - strand, within MPMX20_03845at 4051.772 kb on + strand, within MPMX20_03845at 4051.780 kb on - strand, within MPMX20_03845at 4051.781 kb on + strand, within MPMX20_03845at 4051.828 kb on - strand, within MPMX20_03845at 4051.846 kb on + strand, within MPMX20_03845at 4051.846 kb on + strand, within MPMX20_03845at 4051.846 kb on + strand, within MPMX20_03845at 4051.846 kb on + strand, within MPMX20_03845at 4051.846 kb on + strand, within MPMX20_03845at 4051.854 kb on - strand, within MPMX20_03845at 4051.854 kb on - strand, within MPMX20_03845at 4051.854 kb on - strand, within MPMX20_03845at 4051.854 kb on - strand, within MPMX20_03845at 4051.854 kb on - strand, within MPMX20_03845at 4051.854 kb on - strand, within MPMX20_03845at 4051.854 kb on - strand, within MPMX20_03845at 4051.903 kb on + strand, within MPMX20_03845at 4051.923 kb on + strand, within MPMX20_03845at 4051.923 kb on + strand, within MPMX20_03845at 4051.923 kb on + strand, within MPMX20_03845at 4051.923 kb on + strand, within MPMX20_03845at 4051.923 kb on + strand, within MPMX20_03845at 4051.923 kb on + strand, within MPMX20_03845at 4051.923 kb on + strand, within MPMX20_03845at 4051.923 kb on + strand, within MPMX20_03845at 4051.923 kb on + strand, within MPMX20_03845at 4051.926 kb on - strand, within MPMX20_03845at 4051.926 kb on - strand, within MPMX20_03845at 4051.926 kb on - strand, within MPMX20_03845at 4051.926 kb on - strand, within MPMX20_03845at 4051.931 kb on - strand, within MPMX20_03845at 4051.931 kb on - strand, within MPMX20_03845at 4051.931 kb on - strand, within MPMX20_03845at 4051.931 kb on - strand, within MPMX20_03845at 4051.931 kb on - strand, within MPMX20_03845at 4051.931 kb on - strand, within MPMX20_03845at 4051.933 kb on + strand, within MPMX20_03845at 4051.941 kb on - strand, within MPMX20_03845at 4051.960 kb on + strand, within MPMX20_03845at 4051.971 kb on + strand, within MPMX20_03845at 4051.973 kb on + strand, within MPMX20_03845at 4051.976 kb on - strand, within MPMX20_03845at 4051.981 kb on - strand, within MPMX20_03845at 4051.984 kb on - strand, within MPMX20_03845at 4052.048 kb on + strand, within MPMX20_03845at 4052.064 kb on - strand, within MPMX20_03845at 4052.072 kb on - strand, within MPMX20_03845at 4052.079 kb on - strand, within MPMX20_03845at 4052.099 kb on - strand, within MPMX20_03845at 4052.123 kb on - strand, within MPMX20_03845at 4052.167 kb on - strand, within MPMX20_03845at 4052.206 kb on + strand, within MPMX20_03845

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196
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4,048,747 - MPMX20_03842 0.59 -1.3
4,048,763 - MPMX20_03842 0.61 -0.6
4,048,845 - MPMX20_03842 0.71 -0.5
4,048,850 - MPMX20_03842 0.71 -2.6
4,048,890 + MPMX20_03842 0.76 +0.8
4,048,890 + MPMX20_03842 0.76 +0.5
4,048,898 - MPMX20_03842 0.77 -2.5
4,048,904 + MPMX20_03842 0.77 -1.9
4,048,912 - MPMX20_03842 0.78 -3.1
4,048,983 + MPMX20_03842 0.87 -0.2
4,049,081 + +0.5
4,049,325 + MPMX20_03843 0.20 -2.9
4,049,454 + MPMX20_03843 0.58 +1.6
4,049,454 + MPMX20_03843 0.58 +1.6
4,049,462 - MPMX20_03843 0.61 -1.6
4,049,462 - MPMX20_03843 0.61 -1.8
4,049,462 - MPMX20_03843 0.61 +0.3
4,049,480 - MPMX20_03843 0.66 +0.9
4,049,486 + MPMX20_03843 0.68 +2.2
4,049,486 + MPMX20_03843 0.68 +0.1
4,049,521 + MPMX20_03843 0.78 +1.8
4,049,529 - MPMX20_03843 0.81 -0.2
4,049,560 - +0.0
4,049,659 + +1.4
4,049,754 - +1.8
4,049,754 - +1.9
4,049,754 - +1.8
4,049,778 - +2.5
4,049,840 + MPMX20_03844 0.11 +1.9
4,049,840 + MPMX20_03844 0.11 +1.8
4,049,848 - MPMX20_03844 0.11 -0.3
4,049,945 + MPMX20_03844 0.18 +0.6
4,050,001 + MPMX20_03844 0.21 +2.8
4,050,088 + MPMX20_03844 0.27 -0.4
4,050,165 + MPMX20_03844 0.32 +2.6
4,050,167 + MPMX20_03844 0.32 +2.1
4,050,204 - MPMX20_03844 0.34 +4.4
4,050,255 + MPMX20_03844 0.38 +1.1
4,050,255 + MPMX20_03844 0.38 +1.0
4,050,291 + MPMX20_03844 0.40 +2.1
4,050,294 + MPMX20_03844 0.40 +2.5
4,050,302 + MPMX20_03844 0.41 +2.1
4,050,302 + MPMX20_03844 0.41 -0.1
4,050,302 + MPMX20_03844 0.41 +0.0
4,050,310 - MPMX20_03844 0.41 +0.9
4,050,336 + MPMX20_03844 0.43 +0.5
4,050,354 + MPMX20_03844 0.44 +1.3
4,050,389 - MPMX20_03844 0.46 +3.5
4,050,427 - MPMX20_03844 0.49 +1.7
4,050,429 + MPMX20_03844 0.49 +2.8
4,050,430 - MPMX20_03844 0.49 +1.5
4,050,460 + MPMX20_03844 0.51 +2.5
4,050,482 + MPMX20_03844 0.52 +0.3
4,050,528 + MPMX20_03844 0.55 +0.9
4,050,593 + MPMX20_03844 0.59 +2.6
4,050,604 + MPMX20_03844 0.60 +1.6
4,050,612 - MPMX20_03844 0.61 +3.1
4,050,621 - MPMX20_03844 0.61 +3.0
4,050,675 + MPMX20_03844 0.65 +2.1
4,050,675 + MPMX20_03844 0.65 -0.1
4,050,683 - MPMX20_03844 0.65 -0.0
4,050,683 - MPMX20_03844 0.65 +1.9
4,050,686 + MPMX20_03844 0.65 +0.4
4,050,694 - MPMX20_03844 0.66 -0.1
4,050,701 - MPMX20_03844 0.66 +0.6
4,050,720 + MPMX20_03844 0.68 +1.1
4,050,747 - MPMX20_03844 0.69 +1.2
4,050,753 + MPMX20_03844 0.70 +2.5
4,050,764 + MPMX20_03844 0.70 +2.1
4,050,766 - MPMX20_03844 0.71 +1.2
4,050,766 - MPMX20_03844 0.71 +0.9
4,050,800 - MPMX20_03844 0.73 +2.1
4,050,803 - MPMX20_03844 0.73 +1.4
4,050,807 - MPMX20_03844 0.73 +2.8
4,050,832 + MPMX20_03844 0.75 +0.2
4,050,840 - MPMX20_03844 0.75 +1.4
4,050,840 - MPMX20_03844 0.75 +1.8
4,050,854 - MPMX20_03844 0.76 +1.0
4,050,873 - MPMX20_03844 0.78 +2.2
4,050,899 + MPMX20_03844 0.79 +2.0
4,050,899 + MPMX20_03844 0.79 +1.1
4,050,899 + MPMX20_03844 0.79 -0.6
4,050,899 + MPMX20_03844 0.79 +0.8
4,050,945 + MPMX20_03844 0.82 +1.1
4,051,042 + MPMX20_03844 0.88 +1.5
4,051,042 + MPMX20_03844 0.88 +2.5
4,051,042 + MPMX20_03844 0.88 +2.8
4,051,042 + MPMX20_03844 0.88 +1.1
4,051,050 - MPMX20_03844 0.89 +1.6
4,051,050 - MPMX20_03844 0.89 +3.5
4,051,050 - MPMX20_03844 0.89 +2.5
4,051,064 - MPMX20_03844 0.90 +1.0
4,051,064 - MPMX20_03844 0.90 +0.9
4,051,064 - MPMX20_03844 0.90 +1.4
4,051,091 + +0.9
4,051,120 + +0.8
4,051,128 - +2.8
4,051,129 + +0.7
4,051,136 + +1.5
4,051,240 + -1.4
4,051,267 - +2.5
4,051,329 + -2.2
4,051,386 - -1.3
4,051,413 + +1.0
4,051,461 - -0.1
4,051,476 + -0.8
4,051,476 + +0.3
4,051,476 + +1.5
4,051,476 + +2.5
4,051,476 + -0.8
4,051,476 + -0.3
4,051,476 + -2.2
4,051,476 + +0.3
4,051,476 + -0.8
4,051,476 + -0.1
4,051,476 + +0.9
4,051,476 + -0.4
4,051,476 + +0.7
4,051,476 + -1.7
4,051,476 + -0.3
4,051,476 + -1.0
4,051,476 + -0.9
4,051,476 + -1.0
4,051,476 + -0.5
4,051,484 - -0.4
4,051,484 - -0.8
4,051,484 - +1.5
4,051,484 - +0.1
4,051,484 - +0.9
4,051,484 - -1.2
4,051,484 - +3.5
4,051,484 - +1.5
4,051,484 - +0.5
4,051,484 - +0.1
4,051,484 - +1.3
4,051,484 - +0.9
4,051,484 - +1.0
4,051,484 - -0.4
4,051,484 - -1.0
4,051,484 - -1.2
4,051,555 + +2.2
4,051,577 + MPMX20_03845 0.11 -2.4
4,051,611 + MPMX20_03845 0.14 +0.5
4,051,631 + MPMX20_03845 0.16 +0.5
4,051,639 - MPMX20_03845 0.17 -0.1
4,051,639 - MPMX20_03845 0.17 -0.3
4,051,639 - MPMX20_03845 0.17 -2.3
4,051,639 - MPMX20_03845 0.17 -1.4
4,051,648 - MPMX20_03845 0.18 +0.5
4,051,759 + MPMX20_03845 0.28 +0.2
4,051,759 + MPMX20_03845 0.28 -0.8
4,051,769 - MPMX20_03845 0.29 +0.4
4,051,772 + MPMX20_03845 0.29 -1.1
4,051,780 - MPMX20_03845 0.30 -0.7
4,051,781 + MPMX20_03845 0.30 +1.5
4,051,828 - MPMX20_03845 0.35 -0.4
4,051,846 + MPMX20_03845 0.37 -2.4
4,051,846 + MPMX20_03845 0.37 -1.2
4,051,846 + MPMX20_03845 0.37 +1.5
4,051,846 + MPMX20_03845 0.37 -1.1
4,051,846 + MPMX20_03845 0.37 -1.3
4,051,854 - MPMX20_03845 0.37 +0.1
4,051,854 - MPMX20_03845 0.37 -3.2
4,051,854 - MPMX20_03845 0.37 -0.3
4,051,854 - MPMX20_03845 0.37 -0.7
4,051,854 - MPMX20_03845 0.37 -1.5
4,051,854 - MPMX20_03845 0.37 +0.1
4,051,854 - MPMX20_03845 0.37 -0.8
4,051,903 + MPMX20_03845 0.42 +1.3
4,051,923 + MPMX20_03845 0.44 -0.9
4,051,923 + MPMX20_03845 0.44 +0.2
4,051,923 + MPMX20_03845 0.44 -1.2
4,051,923 + MPMX20_03845 0.44 -0.7
4,051,923 + MPMX20_03845 0.44 +2.1
4,051,923 + MPMX20_03845 0.44 -1.2
4,051,923 + MPMX20_03845 0.44 +1.0
4,051,923 + MPMX20_03845 0.44 -1.8
4,051,923 + MPMX20_03845 0.44 -2.3
4,051,926 - MPMX20_03845 0.44 -0.8
4,051,926 - MPMX20_03845 0.44 -1.1
4,051,926 - MPMX20_03845 0.44 +0.2
4,051,926 - MPMX20_03845 0.44 -1.1
4,051,931 - MPMX20_03845 0.45 +1.5
4,051,931 - MPMX20_03845 0.45 +0.0
4,051,931 - MPMX20_03845 0.45 -0.7
4,051,931 - MPMX20_03845 0.45 -1.8
4,051,931 - MPMX20_03845 0.45 -2.4
4,051,931 - MPMX20_03845 0.45 +0.2
4,051,933 + MPMX20_03845 0.45 +0.2
4,051,941 - MPMX20_03845 0.46 +2.5
4,051,960 + MPMX20_03845 0.48 +1.3
4,051,971 + MPMX20_03845 0.49 -0.9
4,051,973 + MPMX20_03845 0.49 -1.1
4,051,976 - MPMX20_03845 0.49 -0.1
4,051,981 - MPMX20_03845 0.50 +0.5
4,051,984 - MPMX20_03845 0.50 -0.4
4,052,048 + MPMX20_03845 0.56 -0.9
4,052,064 - MPMX20_03845 0.58 +0.0
4,052,072 - MPMX20_03845 0.58 -1.3
4,052,079 - MPMX20_03845 0.59 -2.6
4,052,099 - MPMX20_03845 0.61 -2.4
4,052,123 - MPMX20_03845 0.63 -0.4
4,052,167 - MPMX20_03845 0.67 -0.5
4,052,206 + MPMX20_03845 0.71 +0.5

Or see this region's nucleotide sequence