Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03642

Experiment: 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03640 and MPMX20_03641 are separated by 54 nucleotidesMPMX20_03641 and MPMX20_03642 are separated by 15 nucleotidesMPMX20_03642 and MPMX20_03643 overlap by 1 nucleotides MPMX20_03640: MPMX20_03640 - hypothetical protein, at 3,827,638 to 3,828,681 _03640 MPMX20_03641: MPMX20_03641 - Phosphoadenosine phosphosulfate reductase, at 3,828,736 to 3,829,470 _03641 MPMX20_03642: MPMX20_03642 - Sulfite reductase [NADPH] hemoprotein beta-component, at 3,829,486 to 3,831,198 _03642 MPMX20_03643: MPMX20_03643 - Sulfite reductase [NADPH] flavoprotein alpha-component, at 3,831,198 to 3,833,003 _03643 Position (kb) 3829 3830 3831 3832Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3828.500 kb on + strand, within MPMX20_03640at 3828.500 kb on + strand, within MPMX20_03640at 3828.508 kb on - strand, within MPMX20_03640at 3828.548 kb on + strand, within MPMX20_03640at 3828.556 kb on - strand, within MPMX20_03640at 3828.627 kb on + strandat 3828.676 kb on + strandat 3828.694 kb on + strandat 3828.702 kb on - strandat 3828.702 kb on - strandat 3828.702 kb on - strandat 3828.702 kb on - strandat 3828.712 kb on - strandat 3828.741 kb on - strandat 3828.819 kb on + strand, within MPMX20_03641at 3828.850 kb on - strand, within MPMX20_03641at 3828.850 kb on - strand, within MPMX20_03641at 3828.902 kb on + strand, within MPMX20_03641at 3828.903 kb on + strand, within MPMX20_03641at 3828.903 kb on + strand, within MPMX20_03641at 3828.910 kb on - strand, within MPMX20_03641at 3828.911 kb on - strand, within MPMX20_03641at 3828.935 kb on + strand, within MPMX20_03641at 3828.957 kb on - strand, within MPMX20_03641at 3828.983 kb on + strand, within MPMX20_03641at 3829.000 kb on + strand, within MPMX20_03641at 3829.013 kb on + strand, within MPMX20_03641at 3829.013 kb on + strand, within MPMX20_03641at 3829.021 kb on - strand, within MPMX20_03641at 3829.021 kb on - strand, within MPMX20_03641at 3829.021 kb on - strand, within MPMX20_03641at 3829.041 kb on + strand, within MPMX20_03641at 3829.074 kb on - strand, within MPMX20_03641at 3829.100 kb on - strand, within MPMX20_03641at 3829.142 kb on + strand, within MPMX20_03641at 3829.152 kb on - strand, within MPMX20_03641at 3829.165 kb on - strand, within MPMX20_03641at 3829.170 kb on + strand, within MPMX20_03641at 3829.172 kb on - strand, within MPMX20_03641at 3829.176 kb on + strand, within MPMX20_03641at 3829.184 kb on - strand, within MPMX20_03641at 3829.214 kb on - strand, within MPMX20_03641at 3829.315 kb on - strand, within MPMX20_03641at 3829.518 kb on - strandat 3829.542 kb on + strandat 3829.542 kb on + strandat 3829.558 kb on + strandat 3829.558 kb on + strandat 3829.558 kb on + strandat 3829.559 kb on + strandat 3829.566 kb on - strandat 3829.578 kb on + strandat 3829.664 kb on - strand, within MPMX20_03642at 3829.700 kb on - strand, within MPMX20_03642at 3829.717 kb on - strand, within MPMX20_03642at 3829.773 kb on - strand, within MPMX20_03642at 3829.867 kb on - strand, within MPMX20_03642at 3829.882 kb on + strand, within MPMX20_03642at 3829.894 kb on + strand, within MPMX20_03642at 3829.936 kb on + strand, within MPMX20_03642at 3829.936 kb on + strand, within MPMX20_03642at 3829.960 kb on - strand, within MPMX20_03642at 3829.969 kb on - strand, within MPMX20_03642at 3830.013 kb on + strand, within MPMX20_03642at 3830.014 kb on - strand, within MPMX20_03642at 3830.147 kb on + strand, within MPMX20_03642at 3830.156 kb on - strand, within MPMX20_03642at 3830.197 kb on + strand, within MPMX20_03642at 3830.215 kb on - strand, within MPMX20_03642at 3830.224 kb on + strand, within MPMX20_03642at 3830.240 kb on - strand, within MPMX20_03642at 3830.403 kb on - strand, within MPMX20_03642at 3830.410 kb on - strand, within MPMX20_03642at 3830.416 kb on - strand, within MPMX20_03642at 3830.421 kb on - strand, within MPMX20_03642at 3830.448 kb on + strand, within MPMX20_03642at 3830.570 kb on - strand, within MPMX20_03642at 3830.580 kb on + strand, within MPMX20_03642at 3830.683 kb on + strand, within MPMX20_03642at 3830.683 kb on + strand, within MPMX20_03642at 3830.691 kb on - strand, within MPMX20_03642at 3830.691 kb on - strand, within MPMX20_03642at 3830.691 kb on - strand, within MPMX20_03642at 3830.691 kb on - strand, within MPMX20_03642at 3830.726 kb on - strand, within MPMX20_03642at 3830.726 kb on - strand, within MPMX20_03642at 3830.726 kb on - strand, within MPMX20_03642at 3830.726 kb on - strand, within MPMX20_03642at 3830.736 kb on + strand, within MPMX20_03642at 3830.775 kb on + strand, within MPMX20_03642at 3830.843 kb on + strand, within MPMX20_03642at 3830.851 kb on - strand, within MPMX20_03642at 3830.924 kb on - strand, within MPMX20_03642at 3830.981 kb on - strand, within MPMX20_03642at 3831.024 kb on + strand, within MPMX20_03642at 3831.242 kb on - strandat 3831.316 kb on - strandat 3831.361 kb on + strandat 3831.378 kb on + strandat 3831.383 kb on + strand, within MPMX20_03643at 3831.416 kb on - strand, within MPMX20_03643at 3831.455 kb on - strand, within MPMX20_03643at 3831.455 kb on - strand, within MPMX20_03643at 3831.455 kb on - strand, within MPMX20_03643at 3831.455 kb on - strand, within MPMX20_03643at 3831.566 kb on + strand, within MPMX20_03643at 3831.572 kb on - strand, within MPMX20_03643at 3831.584 kb on + strand, within MPMX20_03643at 3831.592 kb on - strand, within MPMX20_03643at 3831.620 kb on + strand, within MPMX20_03643at 3831.789 kb on + strand, within MPMX20_03643at 3831.795 kb on - strand, within MPMX20_03643at 3831.797 kb on - strand, within MPMX20_03643at 3831.840 kb on - strand, within MPMX20_03643at 3831.880 kb on + strand, within MPMX20_03643at 3831.934 kb on + strand, within MPMX20_03643at 3831.934 kb on + strand, within MPMX20_03643at 3831.934 kb on + strand, within MPMX20_03643at 3831.942 kb on - strand, within MPMX20_03643at 3831.942 kb on - strand, within MPMX20_03643at 3831.942 kb on - strand, within MPMX20_03643at 3831.977 kb on + strand, within MPMX20_03643at 3831.977 kb on + strand, within MPMX20_03643at 3831.997 kb on - strand, within MPMX20_03643at 3832.047 kb on + strand, within MPMX20_03643at 3832.050 kb on + strand, within MPMX20_03643at 3832.057 kb on + strand, within MPMX20_03643at 3832.097 kb on + strand, within MPMX20_03643at 3832.132 kb on + strand, within MPMX20_03643

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196
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3,828,500 + MPMX20_03640 0.83 +0.8
3,828,500 + MPMX20_03640 0.83 -1.5
3,828,508 - MPMX20_03640 0.83 -0.6
3,828,548 + MPMX20_03640 0.87 -1.3
3,828,556 - MPMX20_03640 0.88 +0.8
3,828,627 + +0.7
3,828,676 + +0.9
3,828,694 + -2.5
3,828,702 - +0.5
3,828,702 - -0.1
3,828,702 - -0.3
3,828,702 - -0.6
3,828,712 - -1.2
3,828,741 - -0.2
3,828,819 + MPMX20_03641 0.11 -1.3
3,828,850 - MPMX20_03641 0.16 -0.9
3,828,850 - MPMX20_03641 0.16 -0.6
3,828,902 + MPMX20_03641 0.23 -1.4
3,828,903 + MPMX20_03641 0.23 -0.0
3,828,903 + MPMX20_03641 0.23 -0.0
3,828,910 - MPMX20_03641 0.24 -3.7
3,828,911 - MPMX20_03641 0.24 -0.6
3,828,935 + MPMX20_03641 0.27 +0.5
3,828,957 - MPMX20_03641 0.30 -1.4
3,828,983 + MPMX20_03641 0.34 -2.5
3,829,000 + MPMX20_03641 0.36 -1.4
3,829,013 + MPMX20_03641 0.38 -1.0
3,829,013 + MPMX20_03641 0.38 -1.5
3,829,021 - MPMX20_03641 0.39 -2.1
3,829,021 - MPMX20_03641 0.39 +2.5
3,829,021 - MPMX20_03641 0.39 +0.5
3,829,041 + MPMX20_03641 0.41 -2.2
3,829,074 - MPMX20_03641 0.46 -0.9
3,829,100 - MPMX20_03641 0.50 +0.5
3,829,142 + MPMX20_03641 0.55 -2.0
3,829,152 - MPMX20_03641 0.57 -1.7
3,829,165 - MPMX20_03641 0.58 -0.0
3,829,170 + MPMX20_03641 0.59 -3.0
3,829,172 - MPMX20_03641 0.59 -2.6
3,829,176 + MPMX20_03641 0.60 -0.6
3,829,184 - MPMX20_03641 0.61 -0.8
3,829,214 - MPMX20_03641 0.65 -1.8
3,829,315 - MPMX20_03641 0.79 -1.5
3,829,518 - +0.4
3,829,542 + -3.2
3,829,542 + +0.5
3,829,558 + -0.1
3,829,558 + -1.4
3,829,558 + -2.7
3,829,559 + -1.9
3,829,566 - -2.0
3,829,578 + -2.4
3,829,664 - MPMX20_03642 0.10 -2.1
3,829,700 - MPMX20_03642 0.12 +0.5
3,829,717 - MPMX20_03642 0.13 -1.4
3,829,773 - MPMX20_03642 0.17 -0.9
3,829,867 - MPMX20_03642 0.22 -1.0
3,829,882 + MPMX20_03642 0.23 +0.6
3,829,894 + MPMX20_03642 0.24 -2.5
3,829,936 + MPMX20_03642 0.26 -1.4
3,829,936 + MPMX20_03642 0.26 +1.6
3,829,960 - MPMX20_03642 0.28 +1.6
3,829,969 - MPMX20_03642 0.28 -2.6
3,830,013 + MPMX20_03642 0.31 -0.3
3,830,014 - MPMX20_03642 0.31 -0.8
3,830,147 + MPMX20_03642 0.39 -2.4
3,830,156 - MPMX20_03642 0.39 -2.6
3,830,197 + MPMX20_03642 0.42 -1.7
3,830,215 - MPMX20_03642 0.43 +1.0
3,830,224 + MPMX20_03642 0.43 -0.4
3,830,240 - MPMX20_03642 0.44 -1.3
3,830,403 - MPMX20_03642 0.54 -1.0
3,830,410 - MPMX20_03642 0.54 -2.4
3,830,416 - MPMX20_03642 0.54 -1.9
3,830,421 - MPMX20_03642 0.55 -2.1
3,830,448 + MPMX20_03642 0.56 -0.3
3,830,570 - MPMX20_03642 0.63 -1.8
3,830,580 + MPMX20_03642 0.64 -1.4
3,830,683 + MPMX20_03642 0.70 -1.3
3,830,683 + MPMX20_03642 0.70 +3.6
3,830,691 - MPMX20_03642 0.70 -2.0
3,830,691 - MPMX20_03642 0.70 -1.7
3,830,691 - MPMX20_03642 0.70 -1.4
3,830,691 - MPMX20_03642 0.70 -3.4
3,830,726 - MPMX20_03642 0.72 +1.0
3,830,726 - MPMX20_03642 0.72 -0.7
3,830,726 - MPMX20_03642 0.72 -0.0
3,830,726 - MPMX20_03642 0.72 -2.0
3,830,736 + MPMX20_03642 0.73 -2.2
3,830,775 + MPMX20_03642 0.75 -1.8
3,830,843 + MPMX20_03642 0.79 +2.6
3,830,851 - MPMX20_03642 0.80 -0.8
3,830,924 - MPMX20_03642 0.84 -2.8
3,830,981 - MPMX20_03642 0.87 -1.6
3,831,024 + MPMX20_03642 0.90 +1.7
3,831,242 - -2.5
3,831,316 - -1.6
3,831,361 + -1.1
3,831,378 + +0.7
3,831,383 + MPMX20_03643 0.10 -1.7
3,831,416 - MPMX20_03643 0.12 -2.5
3,831,455 - MPMX20_03643 0.14 -2.0
3,831,455 - MPMX20_03643 0.14 -2.5
3,831,455 - MPMX20_03643 0.14 -1.9
3,831,455 - MPMX20_03643 0.14 -0.6
3,831,566 + MPMX20_03643 0.20 -3.0
3,831,572 - MPMX20_03643 0.21 -1.8
3,831,584 + MPMX20_03643 0.21 -0.8
3,831,592 - MPMX20_03643 0.22 -2.4
3,831,620 + MPMX20_03643 0.23 -0.3
3,831,789 + MPMX20_03643 0.33 -0.5
3,831,795 - MPMX20_03643 0.33 -2.4
3,831,797 - MPMX20_03643 0.33 +0.8
3,831,840 - MPMX20_03643 0.36 -1.3
3,831,880 + MPMX20_03643 0.38 -0.4
3,831,934 + MPMX20_03643 0.41 -0.7
3,831,934 + MPMX20_03643 0.41 -0.6
3,831,934 + MPMX20_03643 0.41 -0.3
3,831,942 - MPMX20_03643 0.41 -2.0
3,831,942 - MPMX20_03643 0.41 +0.6
3,831,942 - MPMX20_03643 0.41 -2.9
3,831,977 + MPMX20_03643 0.43 -1.4
3,831,977 + MPMX20_03643 0.43 -0.0
3,831,997 - MPMX20_03643 0.44 -0.6
3,832,047 + MPMX20_03643 0.47 -0.4
3,832,050 + MPMX20_03643 0.47 -0.9
3,832,057 + MPMX20_03643 0.48 -2.5
3,832,097 + MPMX20_03643 0.50 -1.3
3,832,132 + MPMX20_03643 0.52 -2.9

Or see this region's nucleotide sequence