Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02788

Experiment: 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02787 and MPMX20_02788 overlap by 4 nucleotidesMPMX20_02788 and MPMX20_02789 are separated by 19 nucleotides MPMX20_02787: MPMX20_02787 - Protein-glutamate methylesterase/protein-glutamine glutaminase, at 2,942,316 to 2,943,365 _02787 MPMX20_02788: MPMX20_02788 - Chemotaxis protein methyltransferase, at 2,943,362 to 2,944,228 _02788 MPMX20_02789: MPMX20_02789 - Methyl-accepting chemotaxis protein IV, at 2,944,248 to 2,945,849 _02789 Position (kb) 2943 2944 2945Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2942.508 kb on + strand, within MPMX20_02787at 2942.671 kb on - strand, within MPMX20_02787at 2942.693 kb on - strand, within MPMX20_02787at 2942.739 kb on + strand, within MPMX20_02787at 2942.767 kb on - strand, within MPMX20_02787at 2942.791 kb on + strand, within MPMX20_02787at 2942.791 kb on - strand, within MPMX20_02787at 2942.907 kb on + strand, within MPMX20_02787at 2942.915 kb on - strand, within MPMX20_02787at 2942.929 kb on + strand, within MPMX20_02787at 2943.086 kb on + strand, within MPMX20_02787at 2943.121 kb on - strand, within MPMX20_02787at 2943.406 kb on + strandat 2943.463 kb on + strand, within MPMX20_02788at 2943.468 kb on + strand, within MPMX20_02788at 2943.468 kb on + strand, within MPMX20_02788at 2943.468 kb on + strand, within MPMX20_02788at 2943.476 kb on - strand, within MPMX20_02788at 2943.615 kb on + strand, within MPMX20_02788at 2943.641 kb on + strand, within MPMX20_02788at 2943.658 kb on + strand, within MPMX20_02788at 2943.658 kb on + strand, within MPMX20_02788at 2943.675 kb on + strand, within MPMX20_02788at 2943.689 kb on + strand, within MPMX20_02788at 2943.697 kb on - strand, within MPMX20_02788at 2943.699 kb on - strand, within MPMX20_02788at 2943.773 kb on + strand, within MPMX20_02788at 2943.788 kb on - strand, within MPMX20_02788at 2943.822 kb on - strand, within MPMX20_02788at 2943.834 kb on + strand, within MPMX20_02788at 2943.844 kb on - strand, within MPMX20_02788at 2943.867 kb on + strand, within MPMX20_02788at 2943.867 kb on + strand, within MPMX20_02788at 2943.880 kb on + strand, within MPMX20_02788at 2943.918 kb on + strand, within MPMX20_02788at 2943.920 kb on + strand, within MPMX20_02788at 2943.952 kb on + strand, within MPMX20_02788at 2943.960 kb on - strand, within MPMX20_02788at 2943.985 kb on + strand, within MPMX20_02788at 2943.995 kb on + strand, within MPMX20_02788at 2943.995 kb on + strand, within MPMX20_02788at 2943.995 kb on + strand, within MPMX20_02788at 2943.995 kb on + strand, within MPMX20_02788at 2943.995 kb on + strand, within MPMX20_02788at 2943.995 kb on + strand, within MPMX20_02788at 2943.995 kb on + strand, within MPMX20_02788at 2943.998 kb on - strand, within MPMX20_02788at 2944.003 kb on - strand, within MPMX20_02788at 2944.003 kb on - strand, within MPMX20_02788at 2944.003 kb on - strand, within MPMX20_02788at 2944.042 kb on + strand, within MPMX20_02788at 2944.073 kb on + strand, within MPMX20_02788at 2944.073 kb on + strand, within MPMX20_02788at 2944.073 kb on + strand, within MPMX20_02788at 2944.073 kb on + strand, within MPMX20_02788at 2944.073 kb on + strand, within MPMX20_02788at 2944.081 kb on - strand, within MPMX20_02788at 2944.081 kb on - strand, within MPMX20_02788at 2944.081 kb on - strand, within MPMX20_02788at 2944.081 kb on - strand, within MPMX20_02788at 2944.081 kb on - strand, within MPMX20_02788at 2944.192 kb on + strandat 2944.256 kb on + strandat 2944.267 kb on + strandat 2944.275 kb on - strandat 2944.313 kb on + strandat 2944.461 kb on + strand, within MPMX20_02789at 2944.492 kb on + strand, within MPMX20_02789at 2944.519 kb on - strand, within MPMX20_02789at 2944.562 kb on + strand, within MPMX20_02789at 2944.565 kb on - strand, within MPMX20_02789at 2944.565 kb on - strand, within MPMX20_02789at 2944.570 kb on - strand, within MPMX20_02789at 2944.570 kb on - strand, within MPMX20_02789at 2944.577 kb on - strand, within MPMX20_02789at 2944.806 kb on + strand, within MPMX20_02789at 2944.813 kb on + strand, within MPMX20_02789at 2944.813 kb on + strand, within MPMX20_02789at 2944.868 kb on + strand, within MPMX20_02789at 2944.875 kb on - strand, within MPMX20_02789at 2944.875 kb on - strand, within MPMX20_02789at 2944.877 kb on + strand, within MPMX20_02789at 2944.877 kb on + strand, within MPMX20_02789at 2944.885 kb on - strand, within MPMX20_02789at 2944.885 kb on - strand, within MPMX20_02789at 2944.885 kb on - strand, within MPMX20_02789at 2944.921 kb on + strand, within MPMX20_02789at 2944.931 kb on + strand, within MPMX20_02789at 2945.033 kb on + strand, within MPMX20_02789at 2945.090 kb on + strand, within MPMX20_02789at 2945.152 kb on + strand, within MPMX20_02789at 2945.152 kb on + strand, within MPMX20_02789at 2945.160 kb on - strand, within MPMX20_02789at 2945.160 kb on - strand, within MPMX20_02789at 2945.170 kb on - strand, within MPMX20_02789at 2945.226 kb on + strand, within MPMX20_02789at 2945.226 kb on + strand, within MPMX20_02789at 2945.226 kb on + strand, within MPMX20_02789at 2945.226 kb on + strand, within MPMX20_02789

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196
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2,942,508 + MPMX20_02787 0.18 -1.4
2,942,671 - MPMX20_02787 0.34 -0.6
2,942,693 - MPMX20_02787 0.36 -2.2
2,942,739 + MPMX20_02787 0.40 +0.2
2,942,767 - MPMX20_02787 0.43 +0.3
2,942,791 + MPMX20_02787 0.45 -1.3
2,942,791 - MPMX20_02787 0.45 -1.8
2,942,907 + MPMX20_02787 0.56 +0.3
2,942,915 - MPMX20_02787 0.57 -0.4
2,942,929 + MPMX20_02787 0.58 -2.7
2,943,086 + MPMX20_02787 0.73 -0.7
2,943,121 - MPMX20_02787 0.77 -0.5
2,943,406 + -2.4
2,943,463 + MPMX20_02788 0.12 -1.3
2,943,468 + MPMX20_02788 0.12 +0.5
2,943,468 + MPMX20_02788 0.12 -2.0
2,943,468 + MPMX20_02788 0.12 -2.3
2,943,476 - MPMX20_02788 0.13 +1.5
2,943,615 + MPMX20_02788 0.29 -1.9
2,943,641 + MPMX20_02788 0.32 +0.3
2,943,658 + MPMX20_02788 0.34 -0.5
2,943,658 + MPMX20_02788 0.34 -2.1
2,943,675 + MPMX20_02788 0.36 -0.5
2,943,689 + MPMX20_02788 0.38 -2.4
2,943,697 - MPMX20_02788 0.39 +0.5
2,943,699 - MPMX20_02788 0.39 -2.4
2,943,773 + MPMX20_02788 0.47 +0.1
2,943,788 - MPMX20_02788 0.49 +1.5
2,943,822 - MPMX20_02788 0.53 -2.0
2,943,834 + MPMX20_02788 0.54 -0.9
2,943,844 - MPMX20_02788 0.56 -1.2
2,943,867 + MPMX20_02788 0.58 -1.3
2,943,867 + MPMX20_02788 0.58 -1.0
2,943,880 + MPMX20_02788 0.60 -1.4
2,943,918 + MPMX20_02788 0.64 +0.6
2,943,920 + MPMX20_02788 0.64 -1.0
2,943,952 + MPMX20_02788 0.68 -1.5
2,943,960 - MPMX20_02788 0.69 -0.3
2,943,985 + MPMX20_02788 0.72 -0.3
2,943,995 + MPMX20_02788 0.73 -2.7
2,943,995 + MPMX20_02788 0.73 -0.3
2,943,995 + MPMX20_02788 0.73 -0.1
2,943,995 + MPMX20_02788 0.73 +1.4
2,943,995 + MPMX20_02788 0.73 +0.5
2,943,995 + MPMX20_02788 0.73 +0.9
2,943,995 + MPMX20_02788 0.73 -3.4
2,943,998 - MPMX20_02788 0.73 -0.1
2,944,003 - MPMX20_02788 0.74 -1.4
2,944,003 - MPMX20_02788 0.74 -1.1
2,944,003 - MPMX20_02788 0.74 +0.6
2,944,042 + MPMX20_02788 0.78 -1.3
2,944,073 + MPMX20_02788 0.82 -0.2
2,944,073 + MPMX20_02788 0.82 -1.0
2,944,073 + MPMX20_02788 0.82 -2.1
2,944,073 + MPMX20_02788 0.82 -1.5
2,944,073 + MPMX20_02788 0.82 -2.0
2,944,081 - MPMX20_02788 0.83 -1.3
2,944,081 - MPMX20_02788 0.83 -1.3
2,944,081 - MPMX20_02788 0.83 -0.8
2,944,081 - MPMX20_02788 0.83 +0.0
2,944,081 - MPMX20_02788 0.83 -1.7
2,944,192 + -0.9
2,944,256 + -0.1
2,944,267 + -0.5
2,944,275 - -0.8
2,944,313 + -0.9
2,944,461 + MPMX20_02789 0.13 -0.5
2,944,492 + MPMX20_02789 0.15 -1.3
2,944,519 - MPMX20_02789 0.17 -0.8
2,944,562 + MPMX20_02789 0.20 +0.7
2,944,565 - MPMX20_02789 0.20 -1.0
2,944,565 - MPMX20_02789 0.20 -0.7
2,944,570 - MPMX20_02789 0.20 +0.0
2,944,570 - MPMX20_02789 0.20 -0.6
2,944,577 - MPMX20_02789 0.21 +2.5
2,944,806 + MPMX20_02789 0.35 -0.6
2,944,813 + MPMX20_02789 0.35 +0.2
2,944,813 + MPMX20_02789 0.35 -1.4
2,944,868 + MPMX20_02789 0.39 -0.8
2,944,875 - MPMX20_02789 0.39 +0.9
2,944,875 - MPMX20_02789 0.39 -0.0
2,944,877 + MPMX20_02789 0.39 -0.7
2,944,877 + MPMX20_02789 0.39 -1.8
2,944,885 - MPMX20_02789 0.40 +0.7
2,944,885 - MPMX20_02789 0.40 +0.1
2,944,885 - MPMX20_02789 0.40 -1.5
2,944,921 + MPMX20_02789 0.42 -1.2
2,944,931 + MPMX20_02789 0.43 -2.2
2,945,033 + MPMX20_02789 0.49 -0.1
2,945,090 + MPMX20_02789 0.53 -1.7
2,945,152 + MPMX20_02789 0.56 -0.2
2,945,152 + MPMX20_02789 0.56 -0.5
2,945,160 - MPMX20_02789 0.57 +1.2
2,945,160 - MPMX20_02789 0.57 +0.2
2,945,170 - MPMX20_02789 0.58 +0.5
2,945,226 + MPMX20_02789 0.61 -0.1
2,945,226 + MPMX20_02789 0.61 -0.1
2,945,226 + MPMX20_02789 0.61 -0.5
2,945,226 + MPMX20_02789 0.61 +0.2

Or see this region's nucleotide sequence