Experiment: 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02784 and MPMX20_02785 are separated by 276 nucleotides MPMX20_02785 and MPMX20_02786 are separated by 10 nucleotides MPMX20_02786 and MPMX20_02787 are separated by 17 nucleotides
MPMX20_02784: MPMX20_02784 - Flagellar biosynthetic protein FlhB, at 2,939,826 to 2,940,974
_02784
MPMX20_02785: MPMX20_02785 - Protein phosphatase CheZ, at 2,941,251 to 2,941,898
_02785
MPMX20_02786: MPMX20_02786 - Chemotaxis protein CheY, at 2,941,909 to 2,942,298
_02786
MPMX20_02787: MPMX20_02787 - Protein-glutamate methylesterase/protein-glutamine glutaminase, at 2,942,316 to 2,943,365
_02787
Position (kb)
2941
2942 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2940.252 kb on + strand, within MPMX20_02784 at 2940.279 kb on - strand, within MPMX20_02784 at 2940.279 kb on - strand, within MPMX20_02784 at 2940.353 kb on + strand, within MPMX20_02784 at 2940.371 kb on + strand, within MPMX20_02784 at 2940.392 kb on + strand, within MPMX20_02784 at 2940.434 kb on - strand, within MPMX20_02784 at 2940.477 kb on + strand, within MPMX20_02784 at 2940.510 kb on - strand, within MPMX20_02784 at 2940.695 kb on - strand, within MPMX20_02784 at 2940.749 kb on + strand, within MPMX20_02784 at 2940.757 kb on - strand, within MPMX20_02784 at 2940.757 kb on - strand, within MPMX20_02784 at 2940.771 kb on - strand, within MPMX20_02784 at 2940.771 kb on - strand, within MPMX20_02784 at 2940.798 kb on - strand, within MPMX20_02784 at 2940.798 kb on - strand, within MPMX20_02784 at 2940.853 kb on + strand, within MPMX20_02784 at 2940.869 kb on + strand at 2940.889 kb on - strand at 2940.897 kb on + strand at 2940.897 kb on + strand at 2940.965 kb on + strand at 2941.015 kb on + strand at 2941.061 kb on + strand at 2941.061 kb on + strand at 2941.061 kb on + strand at 2941.061 kb on + strand at 2941.069 kb on - strand at 2941.211 kb on + strand at 2941.211 kb on + strand at 2941.217 kb on + strand at 2941.219 kb on - strand at 2941.230 kb on + strand at 2941.230 kb on + strand at 2941.238 kb on + strand at 2941.238 kb on - strand at 2941.238 kb on - strand at 2941.238 kb on - strand at 2941.264 kb on - strand at 2941.274 kb on - strand at 2941.283 kb on + strand at 2941.287 kb on + strand at 2941.290 kb on - strand at 2941.330 kb on + strand, within MPMX20_02785 at 2941.333 kb on + strand, within MPMX20_02785 at 2941.346 kb on - strand, within MPMX20_02785 at 2941.441 kb on - strand, within MPMX20_02785 at 2941.452 kb on + strand, within MPMX20_02785 at 2941.512 kb on + strand, within MPMX20_02785 at 2941.520 kb on - strand, within MPMX20_02785 at 2941.529 kb on - strand, within MPMX20_02785 at 2941.576 kb on - strand, within MPMX20_02785 at 2941.583 kb on - strand, within MPMX20_02785 at 2941.673 kb on + strand, within MPMX20_02785 at 2941.673 kb on + strand, within MPMX20_02785 at 2941.681 kb on - strand, within MPMX20_02785 at 2941.683 kb on + strand, within MPMX20_02785 at 2941.691 kb on - strand, within MPMX20_02785 at 2941.713 kb on + strand, within MPMX20_02785 at 2941.721 kb on - strand, within MPMX20_02785 at 2941.721 kb on - strand, within MPMX20_02785 at 2941.721 kb on - strand, within MPMX20_02785 at 2941.728 kb on + strand, within MPMX20_02785 at 2941.731 kb on - strand, within MPMX20_02785 at 2941.731 kb on - strand, within MPMX20_02785 at 2941.736 kb on - strand, within MPMX20_02785 at 2941.822 kb on - strand, within MPMX20_02785 at 2941.836 kb on - strand at 2941.964 kb on + strand, within MPMX20_02786 at 2941.996 kb on + strand, within MPMX20_02786 at 2942.095 kb on - strand, within MPMX20_02786 at 2942.097 kb on + strand, within MPMX20_02786 at 2942.097 kb on + strand, within MPMX20_02786 at 2942.097 kb on + strand, within MPMX20_02786 at 2942.097 kb on + strand, within MPMX20_02786 at 2942.097 kb on + strand, within MPMX20_02786 at 2942.105 kb on - strand, within MPMX20_02786 at 2942.105 kb on - strand, within MPMX20_02786 at 2942.105 kb on - strand, within MPMX20_02786 at 2942.105 kb on - strand, within MPMX20_02786 at 2942.105 kb on - strand, within MPMX20_02786 at 2942.105 kb on - strand, within MPMX20_02786 at 2942.175 kb on - strand, within MPMX20_02786 at 2942.248 kb on - strand, within MPMX20_02786 at 2942.252 kb on + strand, within MPMX20_02786 at 2942.323 kb on + strand at 2942.331 kb on - strand at 2942.341 kb on - strand at 2942.508 kb on + strand, within MPMX20_02787 at 2942.671 kb on - strand, within MPMX20_02787 at 2942.693 kb on - strand, within MPMX20_02787 at 2942.739 kb on + strand, within MPMX20_02787 at 2942.767 kb on - strand, within MPMX20_02787 at 2942.791 kb on + strand, within MPMX20_02787 at 2942.791 kb on - strand, within MPMX20_02787
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196 remove 2,940,252 + MPMX20_02784 0.37 +0.5 2,940,279 - MPMX20_02784 0.39 -1.8 2,940,279 - MPMX20_02784 0.39 -1.1 2,940,353 + MPMX20_02784 0.46 -1.0 2,940,371 + MPMX20_02784 0.47 -1.7 2,940,392 + MPMX20_02784 0.49 +0.6 2,940,434 - MPMX20_02784 0.53 -1.4 2,940,477 + MPMX20_02784 0.57 -1.3 2,940,510 - MPMX20_02784 0.60 -2.0 2,940,695 - MPMX20_02784 0.76 -0.7 2,940,749 + MPMX20_02784 0.80 -1.8 2,940,757 - MPMX20_02784 0.81 -0.2 2,940,757 - MPMX20_02784 0.81 -1.5 2,940,771 - MPMX20_02784 0.82 -1.3 2,940,771 - MPMX20_02784 0.82 -1.1 2,940,798 - MPMX20_02784 0.85 +0.5 2,940,798 - MPMX20_02784 0.85 +0.5 2,940,853 + MPMX20_02784 0.89 -1.3 2,940,869 + -0.3 2,940,889 - +0.1 2,940,897 + +0.1 2,940,897 + -0.5 2,940,965 + -1.7 2,941,015 + +0.1 2,941,061 + -0.4 2,941,061 + +0.9 2,941,061 + -1.4 2,941,061 + +0.1 2,941,069 - -1.8 2,941,211 + +0.1 2,941,211 + -0.9 2,941,217 + -0.1 2,941,219 - -0.4 2,941,230 + -3.3 2,941,230 + -1.0 2,941,238 + +0.0 2,941,238 - +1.7 2,941,238 - -1.1 2,941,238 - +1.7 2,941,264 - +0.2 2,941,274 - -0.0 2,941,283 + -0.9 2,941,287 + -0.8 2,941,290 - -0.8 2,941,330 + MPMX20_02785 0.12 -1.7 2,941,333 + MPMX20_02785 0.13 -1.3 2,941,346 - MPMX20_02785 0.15 -0.4 2,941,441 - MPMX20_02785 0.29 -1.2 2,941,452 + MPMX20_02785 0.31 -3.6 2,941,512 + MPMX20_02785 0.40 +0.9 2,941,520 - MPMX20_02785 0.42 -0.2 2,941,529 - MPMX20_02785 0.43 -4.3 2,941,576 - MPMX20_02785 0.50 -1.7 2,941,583 - MPMX20_02785 0.51 -0.5 2,941,673 + MPMX20_02785 0.65 +1.5 2,941,673 + MPMX20_02785 0.65 -1.5 2,941,681 - MPMX20_02785 0.66 +0.2 2,941,683 + MPMX20_02785 0.67 +0.4 2,941,691 - MPMX20_02785 0.68 -1.5 2,941,713 + MPMX20_02785 0.71 +0.7 2,941,721 - MPMX20_02785 0.73 -3.3 2,941,721 - MPMX20_02785 0.73 -2.1 2,941,721 - MPMX20_02785 0.73 -0.5 2,941,728 + MPMX20_02785 0.74 -1.5 2,941,731 - MPMX20_02785 0.74 -0.5 2,941,731 - MPMX20_02785 0.74 -1.0 2,941,736 - MPMX20_02785 0.75 +0.5 2,941,822 - MPMX20_02785 0.88 -2.1 2,941,836 - -3.3 2,941,964 + MPMX20_02786 0.14 -1.4 2,941,996 + MPMX20_02786 0.22 +1.2 2,942,095 - MPMX20_02786 0.48 -0.5 2,942,097 + MPMX20_02786 0.48 -0.4 2,942,097 + MPMX20_02786 0.48 -1.3 2,942,097 + MPMX20_02786 0.48 +0.3 2,942,097 + MPMX20_02786 0.48 -2.7 2,942,097 + MPMX20_02786 0.48 -0.7 2,942,105 - MPMX20_02786 0.50 -0.8 2,942,105 - MPMX20_02786 0.50 -0.7 2,942,105 - MPMX20_02786 0.50 -2.1 2,942,105 - MPMX20_02786 0.50 +0.1 2,942,105 - MPMX20_02786 0.50 -1.2 2,942,105 - MPMX20_02786 0.50 +0.4 2,942,175 - MPMX20_02786 0.68 -0.7 2,942,248 - MPMX20_02786 0.87 +0.1 2,942,252 + MPMX20_02786 0.88 +2.5 2,942,323 + -0.5 2,942,331 - -1.5 2,942,341 - +2.9 2,942,508 + MPMX20_02787 0.18 -1.4 2,942,671 - MPMX20_02787 0.34 -0.6 2,942,693 - MPMX20_02787 0.36 -2.2 2,942,739 + MPMX20_02787 0.40 +0.2 2,942,767 - MPMX20_02787 0.43 +0.3 2,942,791 + MPMX20_02787 0.45 -1.3 2,942,791 - MPMX20_02787 0.45 -1.8
Or see this region's nucleotide sequence