Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02785

Experiment: 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02784 and MPMX20_02785 are separated by 276 nucleotidesMPMX20_02785 and MPMX20_02786 are separated by 10 nucleotidesMPMX20_02786 and MPMX20_02787 are separated by 17 nucleotides MPMX20_02784: MPMX20_02784 - Flagellar biosynthetic protein FlhB, at 2,939,826 to 2,940,974 _02784 MPMX20_02785: MPMX20_02785 - Protein phosphatase CheZ, at 2,941,251 to 2,941,898 _02785 MPMX20_02786: MPMX20_02786 - Chemotaxis protein CheY, at 2,941,909 to 2,942,298 _02786 MPMX20_02787: MPMX20_02787 - Protein-glutamate methylesterase/protein-glutamine glutaminase, at 2,942,316 to 2,943,365 _02787 Position (kb) 2941 2942Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2940.252 kb on + strand, within MPMX20_02784at 2940.279 kb on - strand, within MPMX20_02784at 2940.279 kb on - strand, within MPMX20_02784at 2940.353 kb on + strand, within MPMX20_02784at 2940.371 kb on + strand, within MPMX20_02784at 2940.392 kb on + strand, within MPMX20_02784at 2940.434 kb on - strand, within MPMX20_02784at 2940.477 kb on + strand, within MPMX20_02784at 2940.510 kb on - strand, within MPMX20_02784at 2940.695 kb on - strand, within MPMX20_02784at 2940.749 kb on + strand, within MPMX20_02784at 2940.757 kb on - strand, within MPMX20_02784at 2940.757 kb on - strand, within MPMX20_02784at 2940.771 kb on - strand, within MPMX20_02784at 2940.771 kb on - strand, within MPMX20_02784at 2940.798 kb on - strand, within MPMX20_02784at 2940.798 kb on - strand, within MPMX20_02784at 2940.853 kb on + strand, within MPMX20_02784at 2940.869 kb on + strandat 2940.889 kb on - strandat 2940.897 kb on + strandat 2940.897 kb on + strandat 2940.965 kb on + strandat 2941.015 kb on + strandat 2941.061 kb on + strandat 2941.061 kb on + strandat 2941.061 kb on + strandat 2941.061 kb on + strandat 2941.069 kb on - strandat 2941.211 kb on + strandat 2941.211 kb on + strandat 2941.217 kb on + strandat 2941.219 kb on - strandat 2941.230 kb on + strandat 2941.230 kb on + strandat 2941.238 kb on + strandat 2941.238 kb on - strandat 2941.238 kb on - strandat 2941.238 kb on - strandat 2941.264 kb on - strandat 2941.274 kb on - strandat 2941.283 kb on + strandat 2941.287 kb on + strandat 2941.290 kb on - strandat 2941.330 kb on + strand, within MPMX20_02785at 2941.333 kb on + strand, within MPMX20_02785at 2941.346 kb on - strand, within MPMX20_02785at 2941.441 kb on - strand, within MPMX20_02785at 2941.452 kb on + strand, within MPMX20_02785at 2941.512 kb on + strand, within MPMX20_02785at 2941.520 kb on - strand, within MPMX20_02785at 2941.529 kb on - strand, within MPMX20_02785at 2941.576 kb on - strand, within MPMX20_02785at 2941.583 kb on - strand, within MPMX20_02785at 2941.673 kb on + strand, within MPMX20_02785at 2941.673 kb on + strand, within MPMX20_02785at 2941.681 kb on - strand, within MPMX20_02785at 2941.683 kb on + strand, within MPMX20_02785at 2941.691 kb on - strand, within MPMX20_02785at 2941.713 kb on + strand, within MPMX20_02785at 2941.721 kb on - strand, within MPMX20_02785at 2941.721 kb on - strand, within MPMX20_02785at 2941.721 kb on - strand, within MPMX20_02785at 2941.728 kb on + strand, within MPMX20_02785at 2941.731 kb on - strand, within MPMX20_02785at 2941.731 kb on - strand, within MPMX20_02785at 2941.736 kb on - strand, within MPMX20_02785at 2941.822 kb on - strand, within MPMX20_02785at 2941.836 kb on - strandat 2941.964 kb on + strand, within MPMX20_02786at 2941.996 kb on + strand, within MPMX20_02786at 2942.095 kb on - strand, within MPMX20_02786at 2942.097 kb on + strand, within MPMX20_02786at 2942.097 kb on + strand, within MPMX20_02786at 2942.097 kb on + strand, within MPMX20_02786at 2942.097 kb on + strand, within MPMX20_02786at 2942.097 kb on + strand, within MPMX20_02786at 2942.105 kb on - strand, within MPMX20_02786at 2942.105 kb on - strand, within MPMX20_02786at 2942.105 kb on - strand, within MPMX20_02786at 2942.105 kb on - strand, within MPMX20_02786at 2942.105 kb on - strand, within MPMX20_02786at 2942.105 kb on - strand, within MPMX20_02786at 2942.175 kb on - strand, within MPMX20_02786at 2942.248 kb on - strand, within MPMX20_02786at 2942.252 kb on + strand, within MPMX20_02786at 2942.323 kb on + strandat 2942.331 kb on - strandat 2942.341 kb on - strandat 2942.508 kb on + strand, within MPMX20_02787at 2942.671 kb on - strand, within MPMX20_02787at 2942.693 kb on - strand, within MPMX20_02787at 2942.739 kb on + strand, within MPMX20_02787at 2942.767 kb on - strand, within MPMX20_02787at 2942.791 kb on + strand, within MPMX20_02787at 2942.791 kb on - strand, within MPMX20_02787

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196
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2,940,252 + MPMX20_02784 0.37 +0.5
2,940,279 - MPMX20_02784 0.39 -1.8
2,940,279 - MPMX20_02784 0.39 -1.1
2,940,353 + MPMX20_02784 0.46 -1.0
2,940,371 + MPMX20_02784 0.47 -1.7
2,940,392 + MPMX20_02784 0.49 +0.6
2,940,434 - MPMX20_02784 0.53 -1.4
2,940,477 + MPMX20_02784 0.57 -1.3
2,940,510 - MPMX20_02784 0.60 -2.0
2,940,695 - MPMX20_02784 0.76 -0.7
2,940,749 + MPMX20_02784 0.80 -1.8
2,940,757 - MPMX20_02784 0.81 -0.2
2,940,757 - MPMX20_02784 0.81 -1.5
2,940,771 - MPMX20_02784 0.82 -1.3
2,940,771 - MPMX20_02784 0.82 -1.1
2,940,798 - MPMX20_02784 0.85 +0.5
2,940,798 - MPMX20_02784 0.85 +0.5
2,940,853 + MPMX20_02784 0.89 -1.3
2,940,869 + -0.3
2,940,889 - +0.1
2,940,897 + +0.1
2,940,897 + -0.5
2,940,965 + -1.7
2,941,015 + +0.1
2,941,061 + -0.4
2,941,061 + +0.9
2,941,061 + -1.4
2,941,061 + +0.1
2,941,069 - -1.8
2,941,211 + +0.1
2,941,211 + -0.9
2,941,217 + -0.1
2,941,219 - -0.4
2,941,230 + -3.3
2,941,230 + -1.0
2,941,238 + +0.0
2,941,238 - +1.7
2,941,238 - -1.1
2,941,238 - +1.7
2,941,264 - +0.2
2,941,274 - -0.0
2,941,283 + -0.9
2,941,287 + -0.8
2,941,290 - -0.8
2,941,330 + MPMX20_02785 0.12 -1.7
2,941,333 + MPMX20_02785 0.13 -1.3
2,941,346 - MPMX20_02785 0.15 -0.4
2,941,441 - MPMX20_02785 0.29 -1.2
2,941,452 + MPMX20_02785 0.31 -3.6
2,941,512 + MPMX20_02785 0.40 +0.9
2,941,520 - MPMX20_02785 0.42 -0.2
2,941,529 - MPMX20_02785 0.43 -4.3
2,941,576 - MPMX20_02785 0.50 -1.7
2,941,583 - MPMX20_02785 0.51 -0.5
2,941,673 + MPMX20_02785 0.65 +1.5
2,941,673 + MPMX20_02785 0.65 -1.5
2,941,681 - MPMX20_02785 0.66 +0.2
2,941,683 + MPMX20_02785 0.67 +0.4
2,941,691 - MPMX20_02785 0.68 -1.5
2,941,713 + MPMX20_02785 0.71 +0.7
2,941,721 - MPMX20_02785 0.73 -3.3
2,941,721 - MPMX20_02785 0.73 -2.1
2,941,721 - MPMX20_02785 0.73 -0.5
2,941,728 + MPMX20_02785 0.74 -1.5
2,941,731 - MPMX20_02785 0.74 -0.5
2,941,731 - MPMX20_02785 0.74 -1.0
2,941,736 - MPMX20_02785 0.75 +0.5
2,941,822 - MPMX20_02785 0.88 -2.1
2,941,836 - -3.3
2,941,964 + MPMX20_02786 0.14 -1.4
2,941,996 + MPMX20_02786 0.22 +1.2
2,942,095 - MPMX20_02786 0.48 -0.5
2,942,097 + MPMX20_02786 0.48 -0.4
2,942,097 + MPMX20_02786 0.48 -1.3
2,942,097 + MPMX20_02786 0.48 +0.3
2,942,097 + MPMX20_02786 0.48 -2.7
2,942,097 + MPMX20_02786 0.48 -0.7
2,942,105 - MPMX20_02786 0.50 -0.8
2,942,105 - MPMX20_02786 0.50 -0.7
2,942,105 - MPMX20_02786 0.50 -2.1
2,942,105 - MPMX20_02786 0.50 +0.1
2,942,105 - MPMX20_02786 0.50 -1.2
2,942,105 - MPMX20_02786 0.50 +0.4
2,942,175 - MPMX20_02786 0.68 -0.7
2,942,248 - MPMX20_02786 0.87 +0.1
2,942,252 + MPMX20_02786 0.88 +2.5
2,942,323 + -0.5
2,942,331 - -1.5
2,942,341 - +2.9
2,942,508 + MPMX20_02787 0.18 -1.4
2,942,671 - MPMX20_02787 0.34 -0.6
2,942,693 - MPMX20_02787 0.36 -2.2
2,942,739 + MPMX20_02787 0.40 +0.2
2,942,767 - MPMX20_02787 0.43 +0.3
2,942,791 + MPMX20_02787 0.45 -1.3
2,942,791 - MPMX20_02787 0.45 -1.8

Or see this region's nucleotide sequence