Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02023

Experiment: 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02022 and MPMX20_02023 are separated by 0 nucleotidesMPMX20_02023 and MPMX20_02024 are separated by 74 nucleotides MPMX20_02022: MPMX20_02022 - Fumarate hydratase class II, at 2,113,978 to 2,115,372 _02022 MPMX20_02023: MPMX20_02023 - DNA replication terminus site-binding protein, at 2,115,373 to 2,116,302 _02023 MPMX20_02024: MPMX20_02024 - Sensor protein RstB, at 2,116,377 to 2,117,675 _02024 Position (kb) 2115 2116 2117Strain fitness (log2 ratio) -2 -1 0 1 2at 2114.474 kb on - strand, within MPMX20_02022at 2114.486 kb on + strand, within MPMX20_02022at 2114.528 kb on - strand, within MPMX20_02022at 2114.534 kb on + strand, within MPMX20_02022at 2114.680 kb on + strand, within MPMX20_02022at 2114.680 kb on + strand, within MPMX20_02022at 2114.797 kb on - strand, within MPMX20_02022at 2114.815 kb on + strand, within MPMX20_02022at 2114.825 kb on - strand, within MPMX20_02022at 2114.825 kb on - strand, within MPMX20_02022at 2114.956 kb on - strand, within MPMX20_02022at 2114.964 kb on + strand, within MPMX20_02022at 2114.964 kb on + strand, within MPMX20_02022at 2114.978 kb on - strand, within MPMX20_02022at 2115.021 kb on - strand, within MPMX20_02022at 2115.041 kb on + strand, within MPMX20_02022at 2115.100 kb on - strand, within MPMX20_02022at 2115.130 kb on - strand, within MPMX20_02022at 2115.231 kb on + strand, within MPMX20_02022at 2115.239 kb on - strandat 2115.305 kb on - strandat 2115.312 kb on + strandat 2115.539 kb on - strand, within MPMX20_02023at 2115.598 kb on - strand, within MPMX20_02023at 2115.614 kb on + strand, within MPMX20_02023at 2115.647 kb on + strand, within MPMX20_02023at 2115.718 kb on + strand, within MPMX20_02023at 2115.821 kb on + strand, within MPMX20_02023at 2115.869 kb on + strand, within MPMX20_02023at 2115.898 kb on + strand, within MPMX20_02023at 2115.898 kb on + strand, within MPMX20_02023at 2115.906 kb on - strand, within MPMX20_02023at 2115.906 kb on - strand, within MPMX20_02023at 2115.906 kb on - strand, within MPMX20_02023at 2115.906 kb on - strand, within MPMX20_02023at 2115.906 kb on - strand, within MPMX20_02023at 2115.920 kb on - strand, within MPMX20_02023at 2115.920 kb on - strand, within MPMX20_02023at 2116.009 kb on + strand, within MPMX20_02023at 2116.017 kb on - strand, within MPMX20_02023at 2116.241 kb on - strandat 2116.361 kb on - strandat 2116.361 kb on - strandat 2116.474 kb on + strandat 2116.482 kb on - strandat 2116.489 kb on - strandat 2116.508 kb on + strand, within MPMX20_02024at 2116.546 kb on + strand, within MPMX20_02024at 2116.586 kb on + strand, within MPMX20_02024at 2116.629 kb on + strand, within MPMX20_02024at 2116.629 kb on + strand, within MPMX20_02024at 2116.764 kb on + strand, within MPMX20_02024at 2116.792 kb on - strand, within MPMX20_02024at 2116.821 kb on - strand, within MPMX20_02024at 2116.840 kb on - strand, within MPMX20_02024at 2116.840 kb on - strand, within MPMX20_02024at 2116.884 kb on + strand, within MPMX20_02024at 2116.884 kb on + strand, within MPMX20_02024at 2116.892 kb on - strand, within MPMX20_02024at 2116.903 kb on - strand, within MPMX20_02024at 2116.906 kb on + strand, within MPMX20_02024at 2116.937 kb on + strand, within MPMX20_02024at 2117.064 kb on - strand, within MPMX20_02024at 2117.064 kb on - strand, within MPMX20_02024at 2117.118 kb on + strand, within MPMX20_02024at 2117.196 kb on + strand, within MPMX20_02024at 2117.204 kb on - strand, within MPMX20_02024at 2117.263 kb on - strand, within MPMX20_02024

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196
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2,114,474 - MPMX20_02022 0.36 -1.1
2,114,486 + MPMX20_02022 0.36 +0.0
2,114,528 - MPMX20_02022 0.39 -1.0
2,114,534 + MPMX20_02022 0.40 +1.2
2,114,680 + MPMX20_02022 0.50 +0.7
2,114,680 + MPMX20_02022 0.50 -0.1
2,114,797 - MPMX20_02022 0.59 +1.5
2,114,815 + MPMX20_02022 0.60 +1.2
2,114,825 - MPMX20_02022 0.61 +0.5
2,114,825 - MPMX20_02022 0.61 +0.4
2,114,956 - MPMX20_02022 0.70 +0.8
2,114,964 + MPMX20_02022 0.71 +0.2
2,114,964 + MPMX20_02022 0.71 +0.2
2,114,978 - MPMX20_02022 0.72 -1.6
2,115,021 - MPMX20_02022 0.75 -0.2
2,115,041 + MPMX20_02022 0.76 -0.7
2,115,100 - MPMX20_02022 0.80 -2.0
2,115,130 - MPMX20_02022 0.83 -1.4
2,115,231 + MPMX20_02022 0.90 +2.4
2,115,239 - -0.8
2,115,305 - +0.6
2,115,312 + -0.2
2,115,539 - MPMX20_02023 0.18 -1.5
2,115,598 - MPMX20_02023 0.24 -0.8
2,115,614 + MPMX20_02023 0.26 -2.1
2,115,647 + MPMX20_02023 0.29 -1.2
2,115,718 + MPMX20_02023 0.37 -0.6
2,115,821 + MPMX20_02023 0.48 +0.0
2,115,869 + MPMX20_02023 0.53 -0.9
2,115,898 + MPMX20_02023 0.56 +2.0
2,115,898 + MPMX20_02023 0.56 -0.1
2,115,906 - MPMX20_02023 0.57 -1.4
2,115,906 - MPMX20_02023 0.57 -2.6
2,115,906 - MPMX20_02023 0.57 -2.5
2,115,906 - MPMX20_02023 0.57 -1.8
2,115,906 - MPMX20_02023 0.57 -0.4
2,115,920 - MPMX20_02023 0.59 +0.2
2,115,920 - MPMX20_02023 0.59 -0.1
2,116,009 + MPMX20_02023 0.68 +0.3
2,116,017 - MPMX20_02023 0.69 +0.6
2,116,241 - -0.8
2,116,361 - +1.6
2,116,361 - -0.3
2,116,474 + +0.2
2,116,482 - -1.4
2,116,489 - +0.2
2,116,508 + MPMX20_02024 0.10 +1.6
2,116,546 + MPMX20_02024 0.13 +0.7
2,116,586 + MPMX20_02024 0.16 -1.0
2,116,629 + MPMX20_02024 0.19 +0.1
2,116,629 + MPMX20_02024 0.19 -0.3
2,116,764 + MPMX20_02024 0.30 +0.2
2,116,792 - MPMX20_02024 0.32 +0.9
2,116,821 - MPMX20_02024 0.34 -1.3
2,116,840 - MPMX20_02024 0.36 -1.7
2,116,840 - MPMX20_02024 0.36 +0.5
2,116,884 + MPMX20_02024 0.39 +0.4
2,116,884 + MPMX20_02024 0.39 +2.1
2,116,892 - MPMX20_02024 0.40 -0.1
2,116,903 - MPMX20_02024 0.40 +0.3
2,116,906 + MPMX20_02024 0.41 -0.0
2,116,937 + MPMX20_02024 0.43 +0.7
2,117,064 - MPMX20_02024 0.53 +0.4
2,117,064 - MPMX20_02024 0.53 -1.2
2,117,118 + MPMX20_02024 0.57 -0.4
2,117,196 + MPMX20_02024 0.63 -0.9
2,117,204 - MPMX20_02024 0.64 +0.1
2,117,263 - MPMX20_02024 0.68 +0.8

Or see this region's nucleotide sequence