Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01298

Experiment: 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01296 and MPMX20_01297 are separated by 270 nucleotidesMPMX20_01297 and MPMX20_01298 are separated by 1 nucleotidesMPMX20_01298 and MPMX20_01299 overlap by 1 nucleotidesMPMX20_01299 and MPMX20_01300 are separated by 14 nucleotides MPMX20_01296: MPMX20_01296 - Ribosomal silencing factor RsfS, at 1,357,331 to 1,357,648 _01296 MPMX20_01297: MPMX20_01297 - Nicotinate-nucleotide adenylyltransferase, at 1,357,919 to 1,358,575 _01297 MPMX20_01298: MPMX20_01298 - DNA polymerase III subunit delta, at 1,358,577 to 1,359,608 _01298 MPMX20_01299: MPMX20_01299 - LPS-assembly lipoprotein LptE, at 1,359,608 to 1,360,177 _01299 MPMX20_01300: MPMX20_01300 - Leucine--tRNA ligase, at 1,360,192 to 1,362,774 _01300 Position (kb) 1358 1359 1360Strain fitness (log2 ratio) -2 -1 0 1at 1357.593 kb on - strand, within MPMX20_01296at 1357.593 kb on - strand, within MPMX20_01296at 1357.594 kb on - strand, within MPMX20_01296at 1357.594 kb on - strand, within MPMX20_01296at 1357.643 kb on - strandat 1357.643 kb on - strandat 1357.643 kb on - strandat 1357.669 kb on - strandat 1357.700 kb on + strandat 1357.710 kb on - strandat 1357.713 kb on - strandat 1357.713 kb on - strandat 1357.767 kb on + strandat 1357.775 kb on - strandat 1357.851 kb on + strandat 1357.853 kb on + strandat 1357.853 kb on + strandat 1357.859 kb on - strandat 1357.861 kb on - strandat 1357.861 kb on - strandat 1357.861 kb on - strandat 1357.865 kb on + strandat 1357.865 kb on + strandat 1357.865 kb on + strandat 1357.865 kb on + strandat 1357.865 kb on + strandat 1357.865 kb on + strandat 1357.867 kb on - strandat 1357.867 kb on - strandat 1357.873 kb on - strandat 1357.873 kb on - strandat 1357.873 kb on - strandat 1357.873 kb on - strandat 1357.873 kb on - strandat 1357.962 kb on - strandat 1358.614 kb on - strandat 1358.624 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196
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1,357,593 - MPMX20_01296 0.82 -1.7
1,357,593 - MPMX20_01296 0.82 +0.5
1,357,594 - MPMX20_01296 0.83 -1.2
1,357,594 - MPMX20_01296 0.83 -1.8
1,357,643 - -0.7
1,357,643 - -2.1
1,357,643 - +1.4
1,357,669 - -0.4
1,357,700 + +1.5
1,357,710 - +0.2
1,357,713 - +0.4
1,357,713 - -0.6
1,357,767 + -2.5
1,357,775 - -2.2
1,357,851 + +1.2
1,357,853 + -1.4
1,357,853 + -1.5
1,357,859 - -2.1
1,357,861 - +0.7
1,357,861 - -0.2
1,357,861 - -1.9
1,357,865 + -1.8
1,357,865 + -2.3
1,357,865 + -1.2
1,357,865 + +0.2
1,357,865 + +0.3
1,357,865 + +0.5
1,357,867 - -1.2
1,357,867 - -0.3
1,357,873 - +1.2
1,357,873 - -1.2
1,357,873 - -0.0
1,357,873 - -0.1
1,357,873 - +1.0
1,357,962 - +0.2
1,358,614 - -1.8
1,358,624 - +0.3

Or see this region's nucleotide sequence