Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00429

Experiment: 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00426 and MPMX20_00427 are separated by 55 nucleotidesMPMX20_00427 and MPMX20_00428 are separated by 108 nucleotidesMPMX20_00428 and MPMX20_00429 are separated by 38 nucleotidesMPMX20_00429 and MPMX20_00430 are separated by 262 nucleotidesMPMX20_00430 and MPMX20_00431 overlap by 4 nucleotides MPMX20_00426: MPMX20_00426 - Elongation factor P, at 442,511 to 443,077 _00426 MPMX20_00427: MPMX20_00427 - hypothetical protein, at 443,133 to 443,267 _00427 MPMX20_00428: MPMX20_00428 - hypothetical protein, at 443,376 to 443,522 _00428 MPMX20_00429: MPMX20_00429 - Transcriptional regulatory protein RcsA, at 443,561 to 444,160 _00429 MPMX20_00430: MPMX20_00430 - Guanidinium exporter, at 444,423 to 444,740 _00430 MPMX20_00431: MPMX20_00431 - Outer membrane lipoprotein Blc, at 444,737 to 445,267 _00431 Position (kb) 443 444 445Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 443.164 kb on + strand, within MPMX20_00427at 443.169 kb on + strand, within MPMX20_00427at 443.174 kb on + strand, within MPMX20_00427at 443.174 kb on + strand, within MPMX20_00427at 443.174 kb on + strand, within MPMX20_00427at 443.174 kb on + strand, within MPMX20_00427at 443.174 kb on + strand, within MPMX20_00427at 443.174 kb on + strand, within MPMX20_00427at 443.174 kb on + strand, within MPMX20_00427at 443.182 kb on - strand, within MPMX20_00427at 443.182 kb on - strand, within MPMX20_00427at 443.182 kb on - strand, within MPMX20_00427at 443.182 kb on - strand, within MPMX20_00427at 443.182 kb on - strand, within MPMX20_00427at 443.195 kb on + strand, within MPMX20_00427at 443.197 kb on + strand, within MPMX20_00427at 443.203 kb on - strand, within MPMX20_00427at 443.262 kb on + strandat 443.262 kb on + strandat 443.341 kb on + strandat 443.344 kb on - strandat 443.349 kb on - strandat 443.371 kb on + strandat 443.409 kb on + strand, within MPMX20_00428at 443.436 kb on + strand, within MPMX20_00428at 443.446 kb on - strand, within MPMX20_00428at 443.446 kb on - strand, within MPMX20_00428at 443.446 kb on - strand, within MPMX20_00428at 443.463 kb on - strand, within MPMX20_00428at 443.506 kb on + strand, within MPMX20_00428at 443.514 kb on - strandat 443.516 kb on + strandat 443.534 kb on + strandat 443.539 kb on + strandat 443.550 kb on + strandat 443.642 kb on + strand, within MPMX20_00429at 443.642 kb on + strand, within MPMX20_00429at 443.642 kb on + strand, within MPMX20_00429at 443.642 kb on + strand, within MPMX20_00429at 443.650 kb on - strand, within MPMX20_00429at 443.650 kb on - strand, within MPMX20_00429at 443.650 kb on - strand, within MPMX20_00429at 443.651 kb on - strand, within MPMX20_00429at 443.669 kb on + strand, within MPMX20_00429at 443.696 kb on + strand, within MPMX20_00429at 443.700 kb on + strand, within MPMX20_00429at 443.709 kb on - strand, within MPMX20_00429at 443.722 kb on - strand, within MPMX20_00429at 443.764 kb on + strand, within MPMX20_00429at 443.764 kb on + strand, within MPMX20_00429at 443.772 kb on + strand, within MPMX20_00429at 443.772 kb on - strand, within MPMX20_00429at 443.803 kb on - strand, within MPMX20_00429at 443.808 kb on + strand, within MPMX20_00429at 443.808 kb on + strand, within MPMX20_00429at 443.808 kb on + strand, within MPMX20_00429at 443.808 kb on + strand, within MPMX20_00429at 443.808 kb on + strand, within MPMX20_00429at 443.816 kb on - strand, within MPMX20_00429at 443.816 kb on - strand, within MPMX20_00429at 443.826 kb on - strand, within MPMX20_00429at 443.826 kb on - strand, within MPMX20_00429at 443.832 kb on + strand, within MPMX20_00429at 443.834 kb on + strand, within MPMX20_00429at 443.842 kb on + strand, within MPMX20_00429at 443.842 kb on + strand, within MPMX20_00429at 443.850 kb on - strand, within MPMX20_00429at 443.850 kb on - strand, within MPMX20_00429at 443.888 kb on + strand, within MPMX20_00429at 443.888 kb on + strand, within MPMX20_00429at 443.896 kb on - strand, within MPMX20_00429at 443.896 kb on - strand, within MPMX20_00429at 443.896 kb on - strand, within MPMX20_00429at 443.896 kb on - strand, within MPMX20_00429at 443.920 kb on + strand, within MPMX20_00429at 443.946 kb on - strand, within MPMX20_00429at 443.946 kb on - strand, within MPMX20_00429at 443.946 kb on - strand, within MPMX20_00429at 443.953 kb on + strand, within MPMX20_00429at 443.962 kb on + strand, within MPMX20_00429at 443.968 kb on - strand, within MPMX20_00429at 443.970 kb on - strand, within MPMX20_00429at 443.971 kb on - strand, within MPMX20_00429at 443.974 kb on + strand, within MPMX20_00429at 443.974 kb on + strand, within MPMX20_00429at 443.974 kb on + strand, within MPMX20_00429at 443.974 kb on + strand, within MPMX20_00429at 443.974 kb on + strand, within MPMX20_00429at 443.974 kb on + strand, within MPMX20_00429at 443.982 kb on - strand, within MPMX20_00429at 443.982 kb on - strand, within MPMX20_00429at 443.982 kb on - strand, within MPMX20_00429at 443.989 kb on + strand, within MPMX20_00429at 443.989 kb on + strand, within MPMX20_00429at 443.989 kb on + strand, within MPMX20_00429at 443.989 kb on + strand, within MPMX20_00429at 443.994 kb on + strand, within MPMX20_00429at 443.994 kb on + strand, within MPMX20_00429at 443.994 kb on + strand, within MPMX20_00429at 443.994 kb on + strand, within MPMX20_00429at 443.994 kb on + strand, within MPMX20_00429at 443.994 kb on + strand, within MPMX20_00429at 443.994 kb on + strand, within MPMX20_00429at 443.997 kb on - strand, within MPMX20_00429at 443.997 kb on - strand, within MPMX20_00429at 443.997 kb on - strand, within MPMX20_00429at 443.997 kb on - strand, within MPMX20_00429at 443.997 kb on - strand, within MPMX20_00429at 444.002 kb on - strand, within MPMX20_00429at 444.002 kb on - strand, within MPMX20_00429at 444.036 kb on - strand, within MPMX20_00429at 444.067 kb on - strand, within MPMX20_00429at 444.106 kb on + strandat 444.114 kb on - strandat 444.122 kb on + strandat 444.184 kb on - strandat 444.200 kb on + strandat 444.205 kb on + strandat 444.224 kb on + strandat 444.242 kb on + strandat 444.242 kb on + strandat 444.250 kb on - strandat 444.250 kb on - strandat 444.250 kb on - strandat 444.250 kb on - strandat 444.271 kb on + strandat 444.287 kb on + strandat 444.290 kb on - strandat 444.344 kb on - strandat 444.361 kb on + strandat 444.370 kb on - strandat 444.377 kb on - strandat 444.390 kb on + strandat 444.430 kb on + strandat 444.463 kb on - strand, within MPMX20_00430at 444.477 kb on + strand, within MPMX20_00430at 444.477 kb on + strand, within MPMX20_00430at 444.478 kb on + strand, within MPMX20_00430at 444.485 kb on - strand, within MPMX20_00430at 444.485 kb on - strand, within MPMX20_00430at 444.485 kb on - strand, within MPMX20_00430at 444.496 kb on + strand, within MPMX20_00430at 444.510 kb on + strand, within MPMX20_00430at 444.520 kb on + strand, within MPMX20_00430at 444.520 kb on + strand, within MPMX20_00430at 444.520 kb on + strand, within MPMX20_00430at 444.520 kb on + strand, within MPMX20_00430at 444.520 kb on + strand, within MPMX20_00430at 444.520 kb on + strand, within MPMX20_00430at 444.520 kb on + strand, within MPMX20_00430at 444.520 kb on + strand, within MPMX20_00430at 444.528 kb on - strand, within MPMX20_00430at 444.528 kb on - strand, within MPMX20_00430at 444.528 kb on - strand, within MPMX20_00430at 444.528 kb on - strand, within MPMX20_00430at 444.528 kb on - strand, within MPMX20_00430at 444.528 kb on - strand, within MPMX20_00430at 444.528 kb on - strand, within MPMX20_00430at 444.528 kb on - strand, within MPMX20_00430at 444.592 kb on - strand, within MPMX20_00430at 444.592 kb on - strand, within MPMX20_00430at 444.592 kb on - strand, within MPMX20_00430at 444.594 kb on + strand, within MPMX20_00430at 444.698 kb on + strand, within MPMX20_00430at 444.698 kb on + strand, within MPMX20_00430at 444.702 kb on - strand, within MPMX20_00430at 444.725 kb on + strandat 444.748 kb on + strandat 444.748 kb on + strandat 444.748 kb on + strandat 444.756 kb on - strandat 444.756 kb on - strandat 444.756 kb on - strandat 444.756 kb on - strandat 444.756 kb on - strandat 444.758 kb on + strandat 444.772 kb on + strandat 444.772 kb on + strandat 444.780 kb on - strandat 444.780 kb on - strandat 444.829 kb on + strand, within MPMX20_00431at 444.837 kb on - strand, within MPMX20_00431at 444.837 kb on - strand, within MPMX20_00431at 444.860 kb on + strand, within MPMX20_00431at 444.881 kb on - strand, within MPMX20_00431at 444.883 kb on + strand, within MPMX20_00431at 444.891 kb on - strand, within MPMX20_00431at 444.903 kb on - strand, within MPMX20_00431at 444.959 kb on - strand, within MPMX20_00431at 444.984 kb on + strand, within MPMX20_00431at 445.048 kb on + strand, within MPMX20_00431at 445.048 kb on + strand, within MPMX20_00431at 445.091 kb on - strand, within MPMX20_00431at 445.091 kb on - strand, within MPMX20_00431at 445.091 kb on - strand, within MPMX20_00431at 445.101 kb on - strand, within MPMX20_00431at 445.103 kb on - strand, within MPMX20_00431at 445.143 kb on - strand, within MPMX20_00431

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196
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443,164 + MPMX20_00427 0.23 -0.4
443,169 + MPMX20_00427 0.27 -1.0
443,174 + MPMX20_00427 0.30 -0.4
443,174 + MPMX20_00427 0.30 -2.2
443,174 + MPMX20_00427 0.30 -1.0
443,174 + MPMX20_00427 0.30 +0.8
443,174 + MPMX20_00427 0.30 -0.7
443,174 + MPMX20_00427 0.30 -2.1
443,174 + MPMX20_00427 0.30 -0.5
443,182 - MPMX20_00427 0.36 -0.5
443,182 - MPMX20_00427 0.36 -1.2
443,182 - MPMX20_00427 0.36 -1.1
443,182 - MPMX20_00427 0.36 +0.2
443,182 - MPMX20_00427 0.36 +0.1
443,195 + MPMX20_00427 0.46 -1.2
443,197 + MPMX20_00427 0.47 -0.5
443,203 - MPMX20_00427 0.52 +0.9
443,262 + +0.4
443,262 + -0.1
443,341 + +1.6
443,344 - +1.5
443,349 - +2.5
443,371 + -1.5
443,409 + MPMX20_00428 0.22 -1.4
443,436 + MPMX20_00428 0.41 +1.0
443,446 - MPMX20_00428 0.48 -1.0
443,446 - MPMX20_00428 0.48 +2.5
443,446 - MPMX20_00428 0.48 -0.7
443,463 - MPMX20_00428 0.59 -1.2
443,506 + MPMX20_00428 0.88 +2.5
443,514 - +0.1
443,516 + -1.3
443,534 + +1.6
443,539 + +1.5
443,550 + -1.0
443,642 + MPMX20_00429 0.14 +2.6
443,642 + MPMX20_00429 0.14 +0.5
443,642 + MPMX20_00429 0.14 +1.3
443,642 + MPMX20_00429 0.14 +3.2
443,650 - MPMX20_00429 0.15 +1.5
443,650 - MPMX20_00429 0.15 +0.5
443,650 - MPMX20_00429 0.15 -1.4
443,651 - MPMX20_00429 0.15 +1.1
443,669 + MPMX20_00429 0.18 +1.5
443,696 + MPMX20_00429 0.23 -0.5
443,700 + MPMX20_00429 0.23 +0.2
443,709 - MPMX20_00429 0.25 -0.8
443,722 - MPMX20_00429 0.27 -0.2
443,764 + MPMX20_00429 0.34 +0.5
443,764 + MPMX20_00429 0.34 +2.0
443,772 + MPMX20_00429 0.35 -2.2
443,772 - MPMX20_00429 0.35 +2.6
443,803 - MPMX20_00429 0.40 +0.7
443,808 + MPMX20_00429 0.41 -1.1
443,808 + MPMX20_00429 0.41 +2.0
443,808 + MPMX20_00429 0.41 +0.1
443,808 + MPMX20_00429 0.41 +1.7
443,808 + MPMX20_00429 0.41 +0.9
443,816 - MPMX20_00429 0.42 -1.5
443,816 - MPMX20_00429 0.42 +2.3
443,826 - MPMX20_00429 0.44 +1.2
443,826 - MPMX20_00429 0.44 +4.4
443,832 + MPMX20_00429 0.45 -3.1
443,834 + MPMX20_00429 0.46 +2.9
443,842 + MPMX20_00429 0.47 -0.4
443,842 + MPMX20_00429 0.47 +0.9
443,850 - MPMX20_00429 0.48 -2.0
443,850 - MPMX20_00429 0.48 +2.4
443,888 + MPMX20_00429 0.55 +1.5
443,888 + MPMX20_00429 0.55 +1.5
443,896 - MPMX20_00429 0.56 +2.9
443,896 - MPMX20_00429 0.56 +1.7
443,896 - MPMX20_00429 0.56 +0.1
443,896 - MPMX20_00429 0.56 -1.1
443,920 + MPMX20_00429 0.60 -0.4
443,946 - MPMX20_00429 0.64 -1.5
443,946 - MPMX20_00429 0.64 -0.7
443,946 - MPMX20_00429 0.64 +1.0
443,953 + MPMX20_00429 0.65 +1.7
443,962 + MPMX20_00429 0.67 +2.3
443,968 - MPMX20_00429 0.68 +4.9
443,970 - MPMX20_00429 0.68 -1.6
443,971 - MPMX20_00429 0.68 -0.2
443,974 + MPMX20_00429 0.69 +1.2
443,974 + MPMX20_00429 0.69 -1.4
443,974 + MPMX20_00429 0.69 +0.7
443,974 + MPMX20_00429 0.69 -0.9
443,974 + MPMX20_00429 0.69 -0.1
443,974 + MPMX20_00429 0.69 +0.5
443,982 - MPMX20_00429 0.70 -1.5
443,982 - MPMX20_00429 0.70 -2.4
443,982 - MPMX20_00429 0.70 +0.9
443,989 + MPMX20_00429 0.71 +0.8
443,989 + MPMX20_00429 0.71 +3.1
443,989 + MPMX20_00429 0.71 +1.0
443,989 + MPMX20_00429 0.71 +1.5
443,994 + MPMX20_00429 0.72 +0.8
443,994 + MPMX20_00429 0.72 -0.7
443,994 + MPMX20_00429 0.72 +2.9
443,994 + MPMX20_00429 0.72 +1.2
443,994 + MPMX20_00429 0.72 +0.1
443,994 + MPMX20_00429 0.72 +2.3
443,994 + MPMX20_00429 0.72 -0.4
443,997 - MPMX20_00429 0.73 -1.2
443,997 - MPMX20_00429 0.73 -1.9
443,997 - MPMX20_00429 0.73 +1.6
443,997 - MPMX20_00429 0.73 -0.1
443,997 - MPMX20_00429 0.73 +0.7
444,002 - MPMX20_00429 0.73 -1.3
444,002 - MPMX20_00429 0.73 -0.5
444,036 - MPMX20_00429 0.79 +2.6
444,067 - MPMX20_00429 0.84 -1.0
444,106 + -1.5
444,114 - +0.0
444,122 + +2.1
444,184 - +0.6
444,200 + +1.5
444,205 + -0.1
444,224 + +1.2
444,242 + -2.2
444,242 + -3.0
444,250 - -1.9
444,250 - -1.5
444,250 - -0.0
444,250 - -2.1
444,271 + +1.7
444,287 + -0.4
444,290 - -2.1
444,344 - +2.5
444,361 + -0.1
444,370 - -0.5
444,377 - -1.2
444,390 + -2.2
444,430 + -1.1
444,463 - MPMX20_00430 0.13 +0.5
444,477 + MPMX20_00430 0.17 -2.8
444,477 + MPMX20_00430 0.17 +0.1
444,478 + MPMX20_00430 0.17 +0.8
444,485 - MPMX20_00430 0.19 -0.3
444,485 - MPMX20_00430 0.19 +0.5
444,485 - MPMX20_00430 0.19 -1.4
444,496 + MPMX20_00430 0.23 -1.4
444,510 + MPMX20_00430 0.27 -0.8
444,520 + MPMX20_00430 0.31 -1.2
444,520 + MPMX20_00430 0.31 +0.5
444,520 + MPMX20_00430 0.31 -0.0
444,520 + MPMX20_00430 0.31 +1.0
444,520 + MPMX20_00430 0.31 +1.3
444,520 + MPMX20_00430 0.31 -1.9
444,520 + MPMX20_00430 0.31 +1.2
444,520 + MPMX20_00430 0.31 -1.0
444,528 - MPMX20_00430 0.33 -1.6
444,528 - MPMX20_00430 0.33 +0.5
444,528 - MPMX20_00430 0.33 -0.5
444,528 - MPMX20_00430 0.33 -0.4
444,528 - MPMX20_00430 0.33 -0.9
444,528 - MPMX20_00430 0.33 -1.6
444,528 - MPMX20_00430 0.33 +0.9
444,528 - MPMX20_00430 0.33 +1.5
444,592 - MPMX20_00430 0.53 +0.0
444,592 - MPMX20_00430 0.53 +1.1
444,592 - MPMX20_00430 0.53 +0.3
444,594 + MPMX20_00430 0.54 +0.5
444,698 + MPMX20_00430 0.86 +0.2
444,698 + MPMX20_00430 0.86 +0.6
444,702 - MPMX20_00430 0.88 +0.9
444,725 + +0.8
444,748 + -0.1
444,748 + -0.2
444,748 + +2.5
444,756 - -2.0
444,756 - +0.8
444,756 - +2.0
444,756 - -1.0
444,756 - +1.6
444,758 + -1.0
444,772 + -0.7
444,772 + -0.7
444,780 - +0.5
444,780 - +0.9
444,829 + MPMX20_00431 0.17 -0.7
444,837 - MPMX20_00431 0.19 +0.5
444,837 - MPMX20_00431 0.19 +2.5
444,860 + MPMX20_00431 0.23 +0.5
444,881 - MPMX20_00431 0.27 -1.5
444,883 + MPMX20_00431 0.27 +1.7
444,891 - MPMX20_00431 0.29 -2.0
444,903 - MPMX20_00431 0.31 -0.6
444,959 - MPMX20_00431 0.42 +3.3
444,984 + MPMX20_00431 0.47 -0.1
445,048 + MPMX20_00431 0.59 -0.1
445,048 + MPMX20_00431 0.59 -0.9
445,091 - MPMX20_00431 0.67 -0.4
445,091 - MPMX20_00431 0.67 -2.4
445,091 - MPMX20_00431 0.67 -1.5
445,101 - MPMX20_00431 0.69 +1.7
445,103 - MPMX20_00431 0.69 -1.2
445,143 - MPMX20_00431 0.76 +1.9

Or see this region's nucleotide sequence