Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00319

Experiment: 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00317 and MPMX20_00318 overlap by 4 nucleotidesMPMX20_00318 and MPMX20_00319 overlap by 8 nucleotidesMPMX20_00319 and MPMX20_00320 overlap by 1 nucleotidesMPMX20_00320 and MPMX20_00321 overlap by 4 nucleotides MPMX20_00317: MPMX20_00317 - Putative phosphonates utilization ATP-binding protein PhnK, at 337,133 to 337,888 _00317 MPMX20_00318: MPMX20_00318 - Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase, at 337,885 to 338,730 _00318 MPMX20_00319: MPMX20_00319 - Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI, at 338,723 to 339,787 _00319 MPMX20_00320: MPMX20_00320 - Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH, at 339,787 to 340,371 _00320 MPMX20_00321: MPMX20_00321 - Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG, at 340,368 to 340,820 _00321 Position (kb) 338 339 340Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 337.729 kb on + strand, within MPMX20_00317at 337.768 kb on + strand, within MPMX20_00317at 337.795 kb on - strand, within MPMX20_00317at 337.795 kb on - strand, within MPMX20_00317at 337.801 kb on - strand, within MPMX20_00317at 337.810 kb on + strand, within MPMX20_00317at 337.811 kb on - strand, within MPMX20_00317at 337.841 kb on - strandat 337.845 kb on + strandat 337.853 kb on - strandat 337.854 kb on - strandat 337.869 kb on + strandat 338.025 kb on + strand, within MPMX20_00318at 338.071 kb on + strand, within MPMX20_00318at 338.071 kb on + strand, within MPMX20_00318at 338.079 kb on - strand, within MPMX20_00318at 338.087 kb on + strand, within MPMX20_00318at 338.119 kb on - strand, within MPMX20_00318at 338.121 kb on + strand, within MPMX20_00318at 338.144 kb on + strand, within MPMX20_00318at 338.172 kb on + strand, within MPMX20_00318at 338.215 kb on + strand, within MPMX20_00318at 338.215 kb on + strand, within MPMX20_00318at 338.222 kb on - strand, within MPMX20_00318at 338.223 kb on - strand, within MPMX20_00318at 338.223 kb on - strand, within MPMX20_00318at 338.223 kb on - strand, within MPMX20_00318at 338.223 kb on - strand, within MPMX20_00318at 338.279 kb on - strand, within MPMX20_00318at 338.279 kb on - strand, within MPMX20_00318at 338.286 kb on + strand, within MPMX20_00318at 338.286 kb on + strand, within MPMX20_00318at 338.294 kb on - strand, within MPMX20_00318at 338.294 kb on - strand, within MPMX20_00318at 338.325 kb on + strand, within MPMX20_00318at 338.333 kb on - strand, within MPMX20_00318at 338.335 kb on + strand, within MPMX20_00318at 338.338 kb on - strand, within MPMX20_00318at 338.414 kb on + strand, within MPMX20_00318at 338.430 kb on + strand, within MPMX20_00318at 338.458 kb on - strand, within MPMX20_00318at 338.458 kb on - strand, within MPMX20_00318at 338.459 kb on + strand, within MPMX20_00318at 338.506 kb on + strand, within MPMX20_00318at 338.705 kb on + strandat 338.751 kb on + strandat 338.796 kb on + strandat 338.823 kb on + strandat 338.846 kb on - strand, within MPMX20_00319at 338.908 kb on + strand, within MPMX20_00319at 338.908 kb on + strand, within MPMX20_00319at 338.930 kb on + strand, within MPMX20_00319at 338.937 kb on + strand, within MPMX20_00319at 339.007 kb on + strand, within MPMX20_00319at 339.044 kb on - strand, within MPMX20_00319at 339.068 kb on + strand, within MPMX20_00319at 339.069 kb on - strand, within MPMX20_00319at 339.159 kb on + strand, within MPMX20_00319at 339.159 kb on + strand, within MPMX20_00319at 339.159 kb on + strand, within MPMX20_00319at 339.162 kb on - strand, within MPMX20_00319at 339.162 kb on - strand, within MPMX20_00319at 339.162 kb on - strand, within MPMX20_00319at 339.219 kb on - strand, within MPMX20_00319at 339.228 kb on - strand, within MPMX20_00319at 339.265 kb on - strand, within MPMX20_00319at 339.338 kb on + strand, within MPMX20_00319at 339.357 kb on - strand, within MPMX20_00319at 339.362 kb on + strand, within MPMX20_00319at 339.370 kb on - strand, within MPMX20_00319at 339.399 kb on - strand, within MPMX20_00319at 339.427 kb on - strand, within MPMX20_00319at 339.429 kb on + strand, within MPMX20_00319at 339.491 kb on + strand, within MPMX20_00319at 339.590 kb on - strand, within MPMX20_00319at 339.630 kb on - strand, within MPMX20_00319at 339.639 kb on + strand, within MPMX20_00319at 339.647 kb on - strand, within MPMX20_00319at 339.682 kb on + strandat 339.780 kb on + strandat 339.798 kb on + strandat 339.850 kb on - strand, within MPMX20_00320at 339.850 kb on - strand, within MPMX20_00320at 339.850 kb on - strand, within MPMX20_00320at 339.860 kb on - strand, within MPMX20_00320at 339.860 kb on - strand, within MPMX20_00320at 339.860 kb on - strand, within MPMX20_00320at 339.860 kb on - strand, within MPMX20_00320at 339.860 kb on - strand, within MPMX20_00320at 339.868 kb on + strand, within MPMX20_00320at 339.881 kb on + strand, within MPMX20_00320at 339.891 kb on + strand, within MPMX20_00320at 339.899 kb on - strand, within MPMX20_00320at 339.902 kb on + strand, within MPMX20_00320at 339.915 kb on + strand, within MPMX20_00320at 339.934 kb on - strand, within MPMX20_00320at 339.958 kb on - strand, within MPMX20_00320at 339.979 kb on + strand, within MPMX20_00320at 339.992 kb on - strand, within MPMX20_00320at 339.992 kb on - strand, within MPMX20_00320at 340.018 kb on - strand, within MPMX20_00320at 340.049 kb on + strand, within MPMX20_00320at 340.049 kb on + strand, within MPMX20_00320at 340.057 kb on - strand, within MPMX20_00320at 340.100 kb on + strand, within MPMX20_00320at 340.124 kb on + strand, within MPMX20_00320at 340.138 kb on + strand, within MPMX20_00320at 340.247 kb on + strand, within MPMX20_00320at 340.260 kb on - strand, within MPMX20_00320at 340.301 kb on + strand, within MPMX20_00320at 340.301 kb on + strand, within MPMX20_00320at 340.347 kb on + strandat 340.347 kb on + strandat 340.389 kb on - strandat 340.391 kb on + strandat 340.425 kb on + strand, within MPMX20_00321at 340.440 kb on + strand, within MPMX20_00321at 340.445 kb on + strand, within MPMX20_00321at 340.445 kb on + strand, within MPMX20_00321at 340.448 kb on - strand, within MPMX20_00321at 340.448 kb on - strand, within MPMX20_00321at 340.459 kb on + strand, within MPMX20_00321at 340.459 kb on + strand, within MPMX20_00321at 340.525 kb on + strand, within MPMX20_00321at 340.539 kb on + strand, within MPMX20_00321at 340.547 kb on - strand, within MPMX20_00321at 340.584 kb on - strand, within MPMX20_00321at 340.596 kb on + strand, within MPMX20_00321at 340.596 kb on + strand, within MPMX20_00321at 340.596 kb on + strand, within MPMX20_00321at 340.604 kb on - strand, within MPMX20_00321at 340.604 kb on - strand, within MPMX20_00321at 340.625 kb on - strand, within MPMX20_00321at 340.644 kb on + strand, within MPMX20_00321at 340.649 kb on + strand, within MPMX20_00321at 340.657 kb on - strand, within MPMX20_00321at 340.657 kb on - strand, within MPMX20_00321at 340.659 kb on + strand, within MPMX20_00321at 340.667 kb on - strand, within MPMX20_00321at 340.687 kb on - strand, within MPMX20_00321at 340.702 kb on + strand, within MPMX20_00321

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196
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337,729 + MPMX20_00317 0.79 +0.5
337,768 + MPMX20_00317 0.84 -1.0
337,795 - MPMX20_00317 0.88 +0.4
337,795 - MPMX20_00317 0.88 +0.7
337,801 - MPMX20_00317 0.88 -0.3
337,810 + MPMX20_00317 0.90 +2.1
337,811 - MPMX20_00317 0.90 -0.7
337,841 - +3.4
337,845 + -1.5
337,853 - -1.6
337,854 - +0.3
337,869 + +1.1
338,025 + MPMX20_00318 0.17 +2.3
338,071 + MPMX20_00318 0.22 -0.8
338,071 + MPMX20_00318 0.22 +1.5
338,079 - MPMX20_00318 0.23 -0.8
338,087 + MPMX20_00318 0.24 -0.5
338,119 - MPMX20_00318 0.28 -0.1
338,121 + MPMX20_00318 0.28 -2.1
338,144 + MPMX20_00318 0.31 -0.7
338,172 + MPMX20_00318 0.34 -1.4
338,215 + MPMX20_00318 0.39 +0.2
338,215 + MPMX20_00318 0.39 -0.6
338,222 - MPMX20_00318 0.40 -0.7
338,223 - MPMX20_00318 0.40 -0.1
338,223 - MPMX20_00318 0.40 +0.1
338,223 - MPMX20_00318 0.40 -0.8
338,223 - MPMX20_00318 0.40 -1.7
338,279 - MPMX20_00318 0.47 -1.9
338,279 - MPMX20_00318 0.47 +2.2
338,286 + MPMX20_00318 0.47 +2.1
338,286 + MPMX20_00318 0.47 +0.1
338,294 - MPMX20_00318 0.48 -1.8
338,294 - MPMX20_00318 0.48 +0.3
338,325 + MPMX20_00318 0.52 +0.3
338,333 - MPMX20_00318 0.53 +0.2
338,335 + MPMX20_00318 0.53 -1.0
338,338 - MPMX20_00318 0.54 -1.1
338,414 + MPMX20_00318 0.63 -1.4
338,430 + MPMX20_00318 0.64 -0.3
338,458 - MPMX20_00318 0.68 -1.1
338,458 - MPMX20_00318 0.68 -1.7
338,459 + MPMX20_00318 0.68 +1.5
338,506 + MPMX20_00318 0.73 +0.9
338,705 + +1.1
338,751 + -0.1
338,796 + -0.8
338,823 + +1.0
338,846 - MPMX20_00319 0.12 -0.3
338,908 + MPMX20_00319 0.17 -2.0
338,908 + MPMX20_00319 0.17 +0.6
338,930 + MPMX20_00319 0.19 -2.6
338,937 + MPMX20_00319 0.20 +0.7
339,007 + MPMX20_00319 0.27 -0.1
339,044 - MPMX20_00319 0.30 -0.0
339,068 + MPMX20_00319 0.32 +0.9
339,069 - MPMX20_00319 0.32 +1.4
339,159 + MPMX20_00319 0.41 +1.1
339,159 + MPMX20_00319 0.41 +0.4
339,159 + MPMX20_00319 0.41 +0.9
339,162 - MPMX20_00319 0.41 +2.9
339,162 - MPMX20_00319 0.41 +0.4
339,162 - MPMX20_00319 0.41 -1.0
339,219 - MPMX20_00319 0.47 -2.6
339,228 - MPMX20_00319 0.47 -2.1
339,265 - MPMX20_00319 0.51 +0.5
339,338 + MPMX20_00319 0.58 -1.6
339,357 - MPMX20_00319 0.60 +0.1
339,362 + MPMX20_00319 0.60 -0.3
339,370 - MPMX20_00319 0.61 -0.8
339,399 - MPMX20_00319 0.63 -0.7
339,427 - MPMX20_00319 0.66 -0.4
339,429 + MPMX20_00319 0.66 +0.4
339,491 + MPMX20_00319 0.72 +1.8
339,590 - MPMX20_00319 0.81 -0.3
339,630 - MPMX20_00319 0.85 +3.2
339,639 + MPMX20_00319 0.86 -0.5
339,647 - MPMX20_00319 0.87 -2.6
339,682 + +0.3
339,780 + +1.1
339,798 + +1.4
339,850 - MPMX20_00320 0.11 -1.5
339,850 - MPMX20_00320 0.11 -0.1
339,850 - MPMX20_00320 0.11 +0.0
339,860 - MPMX20_00320 0.12 +1.3
339,860 - MPMX20_00320 0.12 +1.2
339,860 - MPMX20_00320 0.12 -1.5
339,860 - MPMX20_00320 0.12 -0.5
339,860 - MPMX20_00320 0.12 +1.9
339,868 + MPMX20_00320 0.14 +0.9
339,881 + MPMX20_00320 0.16 -2.6
339,891 + MPMX20_00320 0.18 -1.6
339,899 - MPMX20_00320 0.19 -2.5
339,902 + MPMX20_00320 0.20 +1.8
339,915 + MPMX20_00320 0.22 -1.4
339,934 - MPMX20_00320 0.25 +0.2
339,958 - MPMX20_00320 0.29 +0.4
339,979 + MPMX20_00320 0.33 +0.9
339,992 - MPMX20_00320 0.35 +0.1
339,992 - MPMX20_00320 0.35 +0.0
340,018 - MPMX20_00320 0.39 -0.6
340,049 + MPMX20_00320 0.45 +0.1
340,049 + MPMX20_00320 0.45 -0.9
340,057 - MPMX20_00320 0.46 -0.6
340,100 + MPMX20_00320 0.54 -0.1
340,124 + MPMX20_00320 0.58 +0.5
340,138 + MPMX20_00320 0.60 -0.1
340,247 + MPMX20_00320 0.79 +1.9
340,260 - MPMX20_00320 0.81 +0.9
340,301 + MPMX20_00320 0.88 +0.1
340,301 + MPMX20_00320 0.88 -0.4
340,347 + -0.5
340,347 + -1.6
340,389 - +0.9
340,391 + +0.9
340,425 + MPMX20_00321 0.13 -1.1
340,440 + MPMX20_00321 0.16 +0.6
340,445 + MPMX20_00321 0.17 -0.7
340,445 + MPMX20_00321 0.17 -0.0
340,448 - MPMX20_00321 0.18 +0.7
340,448 - MPMX20_00321 0.18 -0.6
340,459 + MPMX20_00321 0.20 -0.1
340,459 + MPMX20_00321 0.20 -0.5
340,525 + MPMX20_00321 0.35 -0.2
340,539 + MPMX20_00321 0.38 +0.5
340,547 - MPMX20_00321 0.40 +0.5
340,584 - MPMX20_00321 0.48 -0.5
340,596 + MPMX20_00321 0.50 -1.4
340,596 + MPMX20_00321 0.50 -0.4
340,596 + MPMX20_00321 0.50 -1.6
340,604 - MPMX20_00321 0.52 -0.3
340,604 - MPMX20_00321 0.52 -0.7
340,625 - MPMX20_00321 0.57 +0.2
340,644 + MPMX20_00321 0.61 -0.6
340,649 + MPMX20_00321 0.62 +0.5
340,657 - MPMX20_00321 0.64 -2.4
340,657 - MPMX20_00321 0.64 +1.5
340,659 + MPMX20_00321 0.64 -2.5
340,667 - MPMX20_00321 0.66 +0.5
340,687 - MPMX20_00321 0.70 -2.5
340,702 + MPMX20_00321 0.74 -2.9

Or see this region's nucleotide sequence