Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00271

Experiment: 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00269 and MPMX20_00270 are separated by 22 nucleotidesMPMX20_00270 and MPMX20_00271 overlap by 4 nucleotidesMPMX20_00271 and MPMX20_00272 are separated by 75 nucleotides MPMX20_00269: MPMX20_00269 - Alanine racemase, biosynthetic, at 286,746 to 287,825 _00269 MPMX20_00270: MPMX20_00270 - Nicotinamide riboside transporter PnuC, at 287,848 to 288,405 _00270 MPMX20_00271: MPMX20_00271 - Trifunctional NAD biosynthesis/regulator protein NadR, at 288,402 to 289,412 _00271 MPMX20_00272: MPMX20_00272 - Aromatic-amino-acid aminotransferase, at 289,488 to 290,681 _00272 Position (kb) 288 289 290Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 287.422 kb on - strand, within MPMX20_00269at 287.544 kb on - strand, within MPMX20_00269at 287.610 kb on - strand, within MPMX20_00269at 287.612 kb on + strand, within MPMX20_00269at 287.620 kb on - strand, within MPMX20_00269at 287.663 kb on - strand, within MPMX20_00269at 287.690 kb on + strand, within MPMX20_00269at 287.698 kb on - strand, within MPMX20_00269at 287.698 kb on - strand, within MPMX20_00269at 287.714 kb on + strand, within MPMX20_00269at 287.726 kb on + strandat 287.923 kb on - strand, within MPMX20_00270at 287.948 kb on - strand, within MPMX20_00270at 287.982 kb on + strand, within MPMX20_00270at 287.990 kb on - strand, within MPMX20_00270at 287.990 kb on - strand, within MPMX20_00270at 287.990 kb on - strand, within MPMX20_00270at 288.048 kb on + strand, within MPMX20_00270at 288.048 kb on + strand, within MPMX20_00270at 288.069 kb on + strand, within MPMX20_00270at 288.070 kb on + strand, within MPMX20_00270at 288.077 kb on - strand, within MPMX20_00270at 288.156 kb on - strand, within MPMX20_00270at 288.174 kb on + strand, within MPMX20_00270at 288.182 kb on - strand, within MPMX20_00270at 288.182 kb on - strand, within MPMX20_00270at 288.236 kb on - strand, within MPMX20_00270at 288.242 kb on + strand, within MPMX20_00270at 288.264 kb on + strand, within MPMX20_00270at 288.331 kb on + strand, within MPMX20_00270at 288.332 kb on + strand, within MPMX20_00270at 288.340 kb on - strand, within MPMX20_00270at 288.340 kb on - strand, within MPMX20_00270at 288.368 kb on + strandat 288.368 kb on + strandat 288.368 kb on + strandat 288.368 kb on + strandat 288.376 kb on - strandat 288.376 kb on - strandat 288.376 kb on - strandat 288.376 kb on - strandat 288.376 kb on - strandat 288.408 kb on - strandat 288.410 kb on - strandat 288.415 kb on - strandat 288.429 kb on - strandat 288.452 kb on - strandat 288.454 kb on - strandat 288.470 kb on + strandat 288.470 kb on + strandat 288.470 kb on + strandat 288.475 kb on + strandat 288.478 kb on - strandat 288.478 kb on - strandat 288.478 kb on - strandat 288.493 kb on - strandat 288.508 kb on - strand, within MPMX20_00271at 288.555 kb on + strand, within MPMX20_00271at 288.565 kb on + strand, within MPMX20_00271at 288.573 kb on - strand, within MPMX20_00271at 288.589 kb on + strand, within MPMX20_00271at 288.597 kb on - strand, within MPMX20_00271at 288.597 kb on - strand, within MPMX20_00271at 288.607 kb on + strand, within MPMX20_00271at 288.607 kb on + strand, within MPMX20_00271at 288.615 kb on - strand, within MPMX20_00271at 288.615 kb on - strand, within MPMX20_00271at 288.685 kb on + strand, within MPMX20_00271at 288.685 kb on + strand, within MPMX20_00271at 288.693 kb on - strand, within MPMX20_00271at 288.693 kb on - strand, within MPMX20_00271at 288.713 kb on + strand, within MPMX20_00271at 288.752 kb on - strand, within MPMX20_00271at 288.841 kb on + strand, within MPMX20_00271at 288.855 kb on - strand, within MPMX20_00271at 288.897 kb on - strand, within MPMX20_00271at 288.904 kb on - strand, within MPMX20_00271at 289.029 kb on + strand, within MPMX20_00271at 289.049 kb on - strand, within MPMX20_00271at 289.059 kb on + strand, within MPMX20_00271at 289.095 kb on + strand, within MPMX20_00271at 289.108 kb on - strand, within MPMX20_00271at 289.114 kb on + strand, within MPMX20_00271at 289.131 kb on + strand, within MPMX20_00271at 289.137 kb on + strand, within MPMX20_00271at 289.137 kb on + strand, within MPMX20_00271at 289.197 kb on + strand, within MPMX20_00271at 289.259 kb on + strand, within MPMX20_00271at 289.259 kb on + strand, within MPMX20_00271at 289.269 kb on + strand, within MPMX20_00271at 289.271 kb on + strand, within MPMX20_00271at 289.305 kb on + strand, within MPMX20_00271at 289.313 kb on - strandat 289.313 kb on - strandat 289.531 kb on + strandat 289.537 kb on - strandat 289.592 kb on + strandat 289.622 kb on + strand, within MPMX20_00272at 289.660 kb on - strand, within MPMX20_00272at 289.682 kb on - strand, within MPMX20_00272at 289.698 kb on + strand, within MPMX20_00272at 289.699 kb on + strand, within MPMX20_00272at 289.706 kb on - strand, within MPMX20_00272at 289.706 kb on - strand, within MPMX20_00272at 289.730 kb on + strand, within MPMX20_00272at 289.797 kb on + strand, within MPMX20_00272at 289.815 kb on - strand, within MPMX20_00272at 289.815 kb on - strand, within MPMX20_00272at 289.869 kb on + strand, within MPMX20_00272at 289.869 kb on + strand, within MPMX20_00272at 289.912 kb on + strand, within MPMX20_00272at 289.920 kb on + strand, within MPMX20_00272at 289.920 kb on + strand, within MPMX20_00272at 289.920 kb on + strand, within MPMX20_00272at 289.920 kb on + strand, within MPMX20_00272at 289.928 kb on - strand, within MPMX20_00272at 289.928 kb on - strand, within MPMX20_00272at 289.928 kb on - strand, within MPMX20_00272at 290.005 kb on + strand, within MPMX20_00272at 290.016 kb on - strand, within MPMX20_00272at 290.032 kb on + strand, within MPMX20_00272at 290.032 kb on + strand, within MPMX20_00272at 290.032 kb on + strand, within MPMX20_00272at 290.040 kb on - strand, within MPMX20_00272at 290.040 kb on - strand, within MPMX20_00272at 290.040 kb on - strand, within MPMX20_00272at 290.040 kb on - strand, within MPMX20_00272at 290.040 kb on - strand, within MPMX20_00272at 290.047 kb on + strand, within MPMX20_00272at 290.047 kb on + strand, within MPMX20_00272at 290.047 kb on + strand, within MPMX20_00272at 290.047 kb on + strand, within MPMX20_00272at 290.047 kb on + strand, within MPMX20_00272at 290.054 kb on - strand, within MPMX20_00272at 290.055 kb on - strand, within MPMX20_00272at 290.055 kb on - strand, within MPMX20_00272at 290.060 kb on - strand, within MPMX20_00272at 290.096 kb on - strand, within MPMX20_00272at 290.098 kb on + strand, within MPMX20_00272at 290.106 kb on - strand, within MPMX20_00272at 290.106 kb on - strand, within MPMX20_00272at 290.137 kb on + strand, within MPMX20_00272at 290.189 kb on - strand, within MPMX20_00272at 290.207 kb on + strand, within MPMX20_00272at 290.207 kb on + strand, within MPMX20_00272at 290.215 kb on - strand, within MPMX20_00272at 290.322 kb on + strand, within MPMX20_00272at 290.374 kb on + strand, within MPMX20_00272at 290.374 kb on + strand, within MPMX20_00272at 290.382 kb on - strand, within MPMX20_00272

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196
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287,422 - MPMX20_00269 0.63 +0.2
287,544 - MPMX20_00269 0.74 -0.1
287,610 - MPMX20_00269 0.80 -1.6
287,612 + MPMX20_00269 0.80 -1.0
287,620 - MPMX20_00269 0.81 +2.4
287,663 - MPMX20_00269 0.85 -1.4
287,690 + MPMX20_00269 0.87 +4.4
287,698 - MPMX20_00269 0.88 +0.4
287,698 - MPMX20_00269 0.88 +0.4
287,714 + MPMX20_00269 0.90 -1.7
287,726 + +0.5
287,923 - MPMX20_00270 0.13 -0.1
287,948 - MPMX20_00270 0.18 +0.4
287,982 + MPMX20_00270 0.24 -0.7
287,990 - MPMX20_00270 0.25 -0.7
287,990 - MPMX20_00270 0.25 -0.1
287,990 - MPMX20_00270 0.25 -0.7
288,048 + MPMX20_00270 0.36 -0.6
288,048 + MPMX20_00270 0.36 -0.7
288,069 + MPMX20_00270 0.40 -0.6
288,070 + MPMX20_00270 0.40 +0.9
288,077 - MPMX20_00270 0.41 -0.8
288,156 - MPMX20_00270 0.55 +0.1
288,174 + MPMX20_00270 0.58 -0.4
288,182 - MPMX20_00270 0.60 +2.4
288,182 - MPMX20_00270 0.60 -1.3
288,236 - MPMX20_00270 0.70 +0.9
288,242 + MPMX20_00270 0.71 +0.1
288,264 + MPMX20_00270 0.75 -1.0
288,331 + MPMX20_00270 0.87 +1.4
288,332 + MPMX20_00270 0.87 +1.4
288,340 - MPMX20_00270 0.88 -1.0
288,340 - MPMX20_00270 0.88 +0.3
288,368 + +0.6
288,368 + -0.1
288,368 + -0.9
288,368 + +0.2
288,376 - -0.4
288,376 - +0.0
288,376 - -1.1
288,376 - +0.1
288,376 - -0.1
288,408 - -2.4
288,410 - -2.5
288,415 - -2.1
288,429 - +0.1
288,452 - +0.3
288,454 - +0.7
288,470 + -0.4
288,470 + -2.1
288,470 + -0.5
288,475 + +0.4
288,478 - -0.5
288,478 - -0.9
288,478 - -0.1
288,493 - +2.6
288,508 - MPMX20_00271 0.10 -0.7
288,555 + MPMX20_00271 0.15 +1.1
288,565 + MPMX20_00271 0.16 +0.9
288,573 - MPMX20_00271 0.17 -0.5
288,589 + MPMX20_00271 0.18 +0.6
288,597 - MPMX20_00271 0.19 -1.5
288,597 - MPMX20_00271 0.19 +0.8
288,607 + MPMX20_00271 0.20 +0.7
288,607 + MPMX20_00271 0.20 +0.6
288,615 - MPMX20_00271 0.21 -0.1
288,615 - MPMX20_00271 0.21 -0.9
288,685 + MPMX20_00271 0.28 -0.2
288,685 + MPMX20_00271 0.28 +0.4
288,693 - MPMX20_00271 0.29 +0.4
288,693 - MPMX20_00271 0.29 +1.5
288,713 + MPMX20_00271 0.31 -1.5
288,752 - MPMX20_00271 0.35 -0.1
288,841 + MPMX20_00271 0.43 +0.4
288,855 - MPMX20_00271 0.45 +0.5
288,897 - MPMX20_00271 0.49 -0.9
288,904 - MPMX20_00271 0.50 -1.1
289,029 + MPMX20_00271 0.62 -0.4
289,049 - MPMX20_00271 0.64 +0.0
289,059 + MPMX20_00271 0.65 -2.9
289,095 + MPMX20_00271 0.69 +0.1
289,108 - MPMX20_00271 0.70 +0.4
289,114 + MPMX20_00271 0.70 -1.6
289,131 + MPMX20_00271 0.72 -0.3
289,137 + MPMX20_00271 0.73 -1.2
289,137 + MPMX20_00271 0.73 -0.9
289,197 + MPMX20_00271 0.79 -1.3
289,259 + MPMX20_00271 0.85 +0.4
289,259 + MPMX20_00271 0.85 -0.4
289,269 + MPMX20_00271 0.86 -2.6
289,271 + MPMX20_00271 0.86 -1.4
289,305 + MPMX20_00271 0.89 +0.2
289,313 - +0.3
289,313 - -2.5
289,531 + -2.4
289,537 - +0.9
289,592 + +0.1
289,622 + MPMX20_00272 0.11 -0.4
289,660 - MPMX20_00272 0.14 -0.1
289,682 - MPMX20_00272 0.16 +4.2
289,698 + MPMX20_00272 0.18 -0.1
289,699 + MPMX20_00272 0.18 +0.4
289,706 - MPMX20_00272 0.18 -0.1
289,706 - MPMX20_00272 0.18 -1.4
289,730 + MPMX20_00272 0.20 -0.1
289,797 + MPMX20_00272 0.26 -1.0
289,815 - MPMX20_00272 0.27 +0.9
289,815 - MPMX20_00272 0.27 +3.4
289,869 + MPMX20_00272 0.32 -0.4
289,869 + MPMX20_00272 0.32 -2.2
289,912 + MPMX20_00272 0.36 -0.9
289,920 + MPMX20_00272 0.36 +1.4
289,920 + MPMX20_00272 0.36 -0.6
289,920 + MPMX20_00272 0.36 -0.5
289,920 + MPMX20_00272 0.36 -0.6
289,928 - MPMX20_00272 0.37 +0.0
289,928 - MPMX20_00272 0.37 -0.5
289,928 - MPMX20_00272 0.37 +2.1
290,005 + MPMX20_00272 0.43 -2.7
290,016 - MPMX20_00272 0.44 -0.4
290,032 + MPMX20_00272 0.46 +1.2
290,032 + MPMX20_00272 0.46 -0.9
290,032 + MPMX20_00272 0.46 -1.3
290,040 - MPMX20_00272 0.46 -0.0
290,040 - MPMX20_00272 0.46 +0.1
290,040 - MPMX20_00272 0.46 -0.1
290,040 - MPMX20_00272 0.46 -1.1
290,040 - MPMX20_00272 0.46 -0.6
290,047 + MPMX20_00272 0.47 +0.7
290,047 + MPMX20_00272 0.47 -1.4
290,047 + MPMX20_00272 0.47 +0.2
290,047 + MPMX20_00272 0.47 -0.1
290,047 + MPMX20_00272 0.47 -0.4
290,054 - MPMX20_00272 0.47 +2.4
290,055 - MPMX20_00272 0.47 -2.6
290,055 - MPMX20_00272 0.47 -1.5
290,060 - MPMX20_00272 0.48 -0.5
290,096 - MPMX20_00272 0.51 +0.4
290,098 + MPMX20_00272 0.51 -0.8
290,106 - MPMX20_00272 0.52 -1.0
290,106 - MPMX20_00272 0.52 +1.4
290,137 + MPMX20_00272 0.54 -2.3
290,189 - MPMX20_00272 0.59 +1.4
290,207 + MPMX20_00272 0.60 -1.5
290,207 + MPMX20_00272 0.60 +0.9
290,215 - MPMX20_00272 0.61 -1.1
290,322 + MPMX20_00272 0.70 +0.5
290,374 + MPMX20_00272 0.74 -1.0
290,374 + MPMX20_00272 0.74 -1.3
290,382 - MPMX20_00272 0.75 +0.2

Or see this region's nucleotide sequence