Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00270

Experiment: 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00269 and MPMX20_00270 are separated by 22 nucleotidesMPMX20_00270 and MPMX20_00271 overlap by 4 nucleotides MPMX20_00269: MPMX20_00269 - Alanine racemase, biosynthetic, at 286,746 to 287,825 _00269 MPMX20_00270: MPMX20_00270 - Nicotinamide riboside transporter PnuC, at 287,848 to 288,405 _00270 MPMX20_00271: MPMX20_00271 - Trifunctional NAD biosynthesis/regulator protein NadR, at 288,402 to 289,412 _00271 Position (kb) 287 288 289Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 286.867 kb on + strand, within MPMX20_00269at 286.867 kb on + strand, within MPMX20_00269at 286.871 kb on + strand, within MPMX20_00269at 286.875 kb on - strand, within MPMX20_00269at 286.875 kb on - strand, within MPMX20_00269at 286.875 kb on - strand, within MPMX20_00269at 286.921 kb on + strand, within MPMX20_00269at 287.033 kb on - strand, within MPMX20_00269at 287.047 kb on + strand, within MPMX20_00269at 287.060 kb on - strand, within MPMX20_00269at 287.074 kb on + strand, within MPMX20_00269at 287.119 kb on - strand, within MPMX20_00269at 287.129 kb on - strand, within MPMX20_00269at 287.137 kb on - strand, within MPMX20_00269at 287.173 kb on + strand, within MPMX20_00269at 287.181 kb on - strand, within MPMX20_00269at 287.181 kb on - strand, within MPMX20_00269at 287.230 kb on + strand, within MPMX20_00269at 287.248 kb on - strand, within MPMX20_00269at 287.249 kb on - strand, within MPMX20_00269at 287.299 kb on + strand, within MPMX20_00269at 287.302 kb on - strand, within MPMX20_00269at 287.307 kb on - strand, within MPMX20_00269at 287.314 kb on + strand, within MPMX20_00269at 287.322 kb on - strand, within MPMX20_00269at 287.355 kb on + strand, within MPMX20_00269at 287.355 kb on + strand, within MPMX20_00269at 287.357 kb on + strand, within MPMX20_00269at 287.363 kb on - strand, within MPMX20_00269at 287.363 kb on - strand, within MPMX20_00269at 287.422 kb on - strand, within MPMX20_00269at 287.544 kb on - strand, within MPMX20_00269at 287.610 kb on - strand, within MPMX20_00269at 287.612 kb on + strand, within MPMX20_00269at 287.620 kb on - strand, within MPMX20_00269at 287.663 kb on - strand, within MPMX20_00269at 287.690 kb on + strand, within MPMX20_00269at 287.698 kb on - strand, within MPMX20_00269at 287.698 kb on - strand, within MPMX20_00269at 287.714 kb on + strand, within MPMX20_00269at 287.726 kb on + strandat 287.923 kb on - strand, within MPMX20_00270at 287.948 kb on - strand, within MPMX20_00270at 287.982 kb on + strand, within MPMX20_00270at 287.990 kb on - strand, within MPMX20_00270at 287.990 kb on - strand, within MPMX20_00270at 287.990 kb on - strand, within MPMX20_00270at 288.048 kb on + strand, within MPMX20_00270at 288.048 kb on + strand, within MPMX20_00270at 288.069 kb on + strand, within MPMX20_00270at 288.070 kb on + strand, within MPMX20_00270at 288.077 kb on - strand, within MPMX20_00270at 288.156 kb on - strand, within MPMX20_00270at 288.174 kb on + strand, within MPMX20_00270at 288.182 kb on - strand, within MPMX20_00270at 288.182 kb on - strand, within MPMX20_00270at 288.236 kb on - strand, within MPMX20_00270at 288.242 kb on + strand, within MPMX20_00270at 288.264 kb on + strand, within MPMX20_00270at 288.331 kb on + strand, within MPMX20_00270at 288.332 kb on + strand, within MPMX20_00270at 288.340 kb on - strand, within MPMX20_00270at 288.340 kb on - strand, within MPMX20_00270at 288.368 kb on + strandat 288.368 kb on + strandat 288.368 kb on + strandat 288.368 kb on + strandat 288.376 kb on - strandat 288.376 kb on - strandat 288.376 kb on - strandat 288.376 kb on - strandat 288.376 kb on - strandat 288.408 kb on - strandat 288.410 kb on - strandat 288.415 kb on - strandat 288.429 kb on - strandat 288.452 kb on - strandat 288.454 kb on - strandat 288.470 kb on + strandat 288.470 kb on + strandat 288.470 kb on + strandat 288.475 kb on + strandat 288.478 kb on - strandat 288.478 kb on - strandat 288.478 kb on - strandat 288.493 kb on - strandat 288.508 kb on - strand, within MPMX20_00271at 288.555 kb on + strand, within MPMX20_00271at 288.565 kb on + strand, within MPMX20_00271at 288.573 kb on - strand, within MPMX20_00271at 288.589 kb on + strand, within MPMX20_00271at 288.597 kb on - strand, within MPMX20_00271at 288.597 kb on - strand, within MPMX20_00271at 288.607 kb on + strand, within MPMX20_00271at 288.607 kb on + strand, within MPMX20_00271at 288.615 kb on - strand, within MPMX20_00271at 288.615 kb on - strand, within MPMX20_00271at 288.685 kb on + strand, within MPMX20_00271at 288.685 kb on + strand, within MPMX20_00271at 288.693 kb on - strand, within MPMX20_00271at 288.693 kb on - strand, within MPMX20_00271at 288.713 kb on + strand, within MPMX20_00271at 288.752 kb on - strand, within MPMX20_00271at 288.841 kb on + strand, within MPMX20_00271at 288.855 kb on - strand, within MPMX20_00271at 288.897 kb on - strand, within MPMX20_00271at 288.904 kb on - strand, within MPMX20_00271at 289.029 kb on + strand, within MPMX20_00271at 289.049 kb on - strand, within MPMX20_00271at 289.059 kb on + strand, within MPMX20_00271at 289.095 kb on + strand, within MPMX20_00271at 289.108 kb on - strand, within MPMX20_00271at 289.114 kb on + strand, within MPMX20_00271at 289.131 kb on + strand, within MPMX20_00271at 289.137 kb on + strand, within MPMX20_00271at 289.137 kb on + strand, within MPMX20_00271at 289.197 kb on + strand, within MPMX20_00271at 289.259 kb on + strand, within MPMX20_00271at 289.259 kb on + strand, within MPMX20_00271at 289.269 kb on + strand, within MPMX20_00271at 289.271 kb on + strand, within MPMX20_00271at 289.305 kb on + strand, within MPMX20_00271at 289.313 kb on - strandat 289.313 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196
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286,867 + MPMX20_00269 0.11 -0.4
286,867 + MPMX20_00269 0.11 +0.1
286,871 + MPMX20_00269 0.12 +0.6
286,875 - MPMX20_00269 0.12 +0.9
286,875 - MPMX20_00269 0.12 -0.1
286,875 - MPMX20_00269 0.12 -1.0
286,921 + MPMX20_00269 0.16 -0.0
287,033 - MPMX20_00269 0.27 -0.6
287,047 + MPMX20_00269 0.28 +1.2
287,060 - MPMX20_00269 0.29 -2.1
287,074 + MPMX20_00269 0.30 +1.8
287,119 - MPMX20_00269 0.35 -2.6
287,129 - MPMX20_00269 0.35 +0.1
287,137 - MPMX20_00269 0.36 -0.8
287,173 + MPMX20_00269 0.40 -0.1
287,181 - MPMX20_00269 0.40 +1.5
287,181 - MPMX20_00269 0.40 +0.2
287,230 + MPMX20_00269 0.45 +2.4
287,248 - MPMX20_00269 0.46 -1.2
287,249 - MPMX20_00269 0.47 +0.1
287,299 + MPMX20_00269 0.51 -1.9
287,302 - MPMX20_00269 0.51 -0.8
287,307 - MPMX20_00269 0.52 -2.4
287,314 + MPMX20_00269 0.53 -1.3
287,322 - MPMX20_00269 0.53 +2.0
287,355 + MPMX20_00269 0.56 -1.7
287,355 + MPMX20_00269 0.56 -1.1
287,357 + MPMX20_00269 0.57 +1.1
287,363 - MPMX20_00269 0.57 +0.1
287,363 - MPMX20_00269 0.57 -1.0
287,422 - MPMX20_00269 0.63 +0.2
287,544 - MPMX20_00269 0.74 -0.1
287,610 - MPMX20_00269 0.80 -1.6
287,612 + MPMX20_00269 0.80 -1.0
287,620 - MPMX20_00269 0.81 +2.4
287,663 - MPMX20_00269 0.85 -1.4
287,690 + MPMX20_00269 0.87 +4.4
287,698 - MPMX20_00269 0.88 +0.4
287,698 - MPMX20_00269 0.88 +0.4
287,714 + MPMX20_00269 0.90 -1.7
287,726 + +0.5
287,923 - MPMX20_00270 0.13 -0.1
287,948 - MPMX20_00270 0.18 +0.4
287,982 + MPMX20_00270 0.24 -0.7
287,990 - MPMX20_00270 0.25 -0.7
287,990 - MPMX20_00270 0.25 -0.1
287,990 - MPMX20_00270 0.25 -0.7
288,048 + MPMX20_00270 0.36 -0.6
288,048 + MPMX20_00270 0.36 -0.7
288,069 + MPMX20_00270 0.40 -0.6
288,070 + MPMX20_00270 0.40 +0.9
288,077 - MPMX20_00270 0.41 -0.8
288,156 - MPMX20_00270 0.55 +0.1
288,174 + MPMX20_00270 0.58 -0.4
288,182 - MPMX20_00270 0.60 +2.4
288,182 - MPMX20_00270 0.60 -1.3
288,236 - MPMX20_00270 0.70 +0.9
288,242 + MPMX20_00270 0.71 +0.1
288,264 + MPMX20_00270 0.75 -1.0
288,331 + MPMX20_00270 0.87 +1.4
288,332 + MPMX20_00270 0.87 +1.4
288,340 - MPMX20_00270 0.88 -1.0
288,340 - MPMX20_00270 0.88 +0.3
288,368 + +0.6
288,368 + -0.1
288,368 + -0.9
288,368 + +0.2
288,376 - -0.4
288,376 - +0.0
288,376 - -1.1
288,376 - +0.1
288,376 - -0.1
288,408 - -2.4
288,410 - -2.5
288,415 - -2.1
288,429 - +0.1
288,452 - +0.3
288,454 - +0.7
288,470 + -0.4
288,470 + -2.1
288,470 + -0.5
288,475 + +0.4
288,478 - -0.5
288,478 - -0.9
288,478 - -0.1
288,493 - +2.6
288,508 - MPMX20_00271 0.10 -0.7
288,555 + MPMX20_00271 0.15 +1.1
288,565 + MPMX20_00271 0.16 +0.9
288,573 - MPMX20_00271 0.17 -0.5
288,589 + MPMX20_00271 0.18 +0.6
288,597 - MPMX20_00271 0.19 -1.5
288,597 - MPMX20_00271 0.19 +0.8
288,607 + MPMX20_00271 0.20 +0.7
288,607 + MPMX20_00271 0.20 +0.6
288,615 - MPMX20_00271 0.21 -0.1
288,615 - MPMX20_00271 0.21 -0.9
288,685 + MPMX20_00271 0.28 -0.2
288,685 + MPMX20_00271 0.28 +0.4
288,693 - MPMX20_00271 0.29 +0.4
288,693 - MPMX20_00271 0.29 +1.5
288,713 + MPMX20_00271 0.31 -1.5
288,752 - MPMX20_00271 0.35 -0.1
288,841 + MPMX20_00271 0.43 +0.4
288,855 - MPMX20_00271 0.45 +0.5
288,897 - MPMX20_00271 0.49 -0.9
288,904 - MPMX20_00271 0.50 -1.1
289,029 + MPMX20_00271 0.62 -0.4
289,049 - MPMX20_00271 0.64 +0.0
289,059 + MPMX20_00271 0.65 -2.9
289,095 + MPMX20_00271 0.69 +0.1
289,108 - MPMX20_00271 0.70 +0.4
289,114 + MPMX20_00271 0.70 -1.6
289,131 + MPMX20_00271 0.72 -0.3
289,137 + MPMX20_00271 0.73 -1.2
289,137 + MPMX20_00271 0.73 -0.9
289,197 + MPMX20_00271 0.79 -1.3
289,259 + MPMX20_00271 0.85 +0.4
289,259 + MPMX20_00271 0.85 -0.4
289,269 + MPMX20_00271 0.86 -2.6
289,271 + MPMX20_00271 0.86 -1.4
289,305 + MPMX20_00271 0.89 +0.2
289,313 - +0.3
289,313 - -2.5

Or see this region's nucleotide sequence