Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00268

Experiment: 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00267 and MPMX20_00268 are separated by 66 nucleotidesMPMX20_00268 and MPMX20_00269 are separated by 16 nucleotides MPMX20_00267: MPMX20_00267 - Quinone oxidoreductase 1, at 284,267 to 285,250 _00267 MPMX20_00268: MPMX20_00268 - Replicative DNA helicase, at 285,317 to 286,729 _00268 MPMX20_00269: MPMX20_00269 - Alanine racemase, biosynthetic, at 286,746 to 287,825 _00269 Position (kb) 285 286 287Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 284.320 kb on - strandat 284.322 kb on - strandat 284.331 kb on + strandat 284.370 kb on + strand, within MPMX20_00267at 284.439 kb on + strand, within MPMX20_00267at 284.447 kb on - strand, within MPMX20_00267at 284.482 kb on - strand, within MPMX20_00267at 284.482 kb on - strand, within MPMX20_00267at 284.503 kb on + strand, within MPMX20_00267at 284.511 kb on - strand, within MPMX20_00267at 284.511 kb on - strand, within MPMX20_00267at 284.511 kb on - strand, within MPMX20_00267at 284.545 kb on + strand, within MPMX20_00267at 284.600 kb on - strand, within MPMX20_00267at 284.614 kb on - strand, within MPMX20_00267at 284.614 kb on - strand, within MPMX20_00267at 284.614 kb on - strand, within MPMX20_00267at 284.643 kb on + strand, within MPMX20_00267at 284.651 kb on + strand, within MPMX20_00267at 284.678 kb on + strand, within MPMX20_00267at 284.699 kb on + strand, within MPMX20_00267at 284.707 kb on - strand, within MPMX20_00267at 284.707 kb on - strand, within MPMX20_00267at 284.707 kb on - strand, within MPMX20_00267at 284.730 kb on + strand, within MPMX20_00267at 284.734 kb on + strand, within MPMX20_00267at 284.773 kb on + strand, within MPMX20_00267at 284.786 kb on - strand, within MPMX20_00267at 284.788 kb on + strand, within MPMX20_00267at 284.788 kb on + strand, within MPMX20_00267at 284.788 kb on + strand, within MPMX20_00267at 284.796 kb on - strand, within MPMX20_00267at 284.796 kb on - strand, within MPMX20_00267at 284.796 kb on - strand, within MPMX20_00267at 284.796 kb on - strand, within MPMX20_00267at 284.840 kb on - strand, within MPMX20_00267at 284.857 kb on + strand, within MPMX20_00267at 284.857 kb on + strand, within MPMX20_00267at 284.857 kb on + strand, within MPMX20_00267at 284.868 kb on + strand, within MPMX20_00267at 284.868 kb on + strand, within MPMX20_00267at 284.877 kb on - strand, within MPMX20_00267at 284.964 kb on - strand, within MPMX20_00267at 284.995 kb on + strand, within MPMX20_00267at 285.000 kb on + strand, within MPMX20_00267at 285.045 kb on - strand, within MPMX20_00267at 285.094 kb on + strand, within MPMX20_00267at 285.102 kb on - strand, within MPMX20_00267at 285.116 kb on + strand, within MPMX20_00267at 285.117 kb on - strand, within MPMX20_00267at 285.127 kb on + strand, within MPMX20_00267at 285.135 kb on - strand, within MPMX20_00267at 285.135 kb on - strand, within MPMX20_00267at 285.185 kb on + strandat 285.208 kb on + strandat 285.208 kb on + strandat 285.246 kb on + strandat 285.249 kb on - strandat 285.254 kb on - strandat 286.847 kb on + strandat 286.867 kb on + strand, within MPMX20_00269at 286.867 kb on + strand, within MPMX20_00269at 286.871 kb on + strand, within MPMX20_00269at 286.875 kb on - strand, within MPMX20_00269at 286.875 kb on - strand, within MPMX20_00269at 286.875 kb on - strand, within MPMX20_00269at 286.921 kb on + strand, within MPMX20_00269at 287.033 kb on - strand, within MPMX20_00269at 287.047 kb on + strand, within MPMX20_00269at 287.060 kb on - strand, within MPMX20_00269at 287.074 kb on + strand, within MPMX20_00269at 287.119 kb on - strand, within MPMX20_00269at 287.129 kb on - strand, within MPMX20_00269at 287.137 kb on - strand, within MPMX20_00269at 287.173 kb on + strand, within MPMX20_00269at 287.181 kb on - strand, within MPMX20_00269at 287.181 kb on - strand, within MPMX20_00269at 287.230 kb on + strand, within MPMX20_00269at 287.248 kb on - strand, within MPMX20_00269at 287.249 kb on - strand, within MPMX20_00269at 287.299 kb on + strand, within MPMX20_00269at 287.302 kb on - strand, within MPMX20_00269at 287.307 kb on - strand, within MPMX20_00269at 287.314 kb on + strand, within MPMX20_00269at 287.322 kb on - strand, within MPMX20_00269at 287.355 kb on + strand, within MPMX20_00269at 287.355 kb on + strand, within MPMX20_00269at 287.357 kb on + strand, within MPMX20_00269at 287.363 kb on - strand, within MPMX20_00269at 287.363 kb on - strand, within MPMX20_00269at 287.422 kb on - strand, within MPMX20_00269at 287.544 kb on - strand, within MPMX20_00269at 287.610 kb on - strand, within MPMX20_00269at 287.612 kb on + strand, within MPMX20_00269at 287.620 kb on - strand, within MPMX20_00269at 287.663 kb on - strand, within MPMX20_00269at 287.690 kb on + strand, within MPMX20_00269at 287.698 kb on - strand, within MPMX20_00269at 287.698 kb on - strand, within MPMX20_00269at 287.714 kb on + strand, within MPMX20_00269at 287.726 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Agromyces sp. SAI_196
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284,320 - -2.3
284,322 - +0.9
284,331 + +2.0
284,370 + MPMX20_00267 0.10 +0.1
284,439 + MPMX20_00267 0.17 -0.3
284,447 - MPMX20_00267 0.18 -0.1
284,482 - MPMX20_00267 0.22 -1.0
284,482 - MPMX20_00267 0.22 -0.7
284,503 + MPMX20_00267 0.24 -0.1
284,511 - MPMX20_00267 0.25 +1.3
284,511 - MPMX20_00267 0.25 +0.9
284,511 - MPMX20_00267 0.25 -0.0
284,545 + MPMX20_00267 0.28 +0.1
284,600 - MPMX20_00267 0.34 +0.4
284,614 - MPMX20_00267 0.35 +0.3
284,614 - MPMX20_00267 0.35 +1.3
284,614 - MPMX20_00267 0.35 +0.1
284,643 + MPMX20_00267 0.38 +1.2
284,651 + MPMX20_00267 0.39 -0.6
284,678 + MPMX20_00267 0.42 -0.1
284,699 + MPMX20_00267 0.44 +2.4
284,707 - MPMX20_00267 0.45 +1.9
284,707 - MPMX20_00267 0.45 -1.0
284,707 - MPMX20_00267 0.45 +1.9
284,730 + MPMX20_00267 0.47 -0.2
284,734 + MPMX20_00267 0.47 -1.0
284,773 + MPMX20_00267 0.51 -1.8
284,786 - MPMX20_00267 0.53 -0.5
284,788 + MPMX20_00267 0.53 -1.3
284,788 + MPMX20_00267 0.53 -0.1
284,788 + MPMX20_00267 0.53 -0.6
284,796 - MPMX20_00267 0.54 -0.1
284,796 - MPMX20_00267 0.54 +0.1
284,796 - MPMX20_00267 0.54 +0.2
284,796 - MPMX20_00267 0.54 -0.4
284,840 - MPMX20_00267 0.58 +0.0
284,857 + MPMX20_00267 0.60 +2.3
284,857 + MPMX20_00267 0.60 +1.0
284,857 + MPMX20_00267 0.60 -0.6
284,868 + MPMX20_00267 0.61 +0.4
284,868 + MPMX20_00267 0.61 -1.6
284,877 - MPMX20_00267 0.62 +0.9
284,964 - MPMX20_00267 0.71 +1.5
284,995 + MPMX20_00267 0.74 -1.6
285,000 + MPMX20_00267 0.74 +0.7
285,045 - MPMX20_00267 0.79 -1.7
285,094 + MPMX20_00267 0.84 +1.7
285,102 - MPMX20_00267 0.85 -1.5
285,116 + MPMX20_00267 0.86 -1.1
285,117 - MPMX20_00267 0.86 -0.6
285,127 + MPMX20_00267 0.87 +0.6
285,135 - MPMX20_00267 0.88 +1.0
285,135 - MPMX20_00267 0.88 +0.7
285,185 + +0.9
285,208 + +3.8
285,208 + +0.3
285,246 + -1.8
285,249 - +0.8
285,254 - +2.4
286,847 + -0.9
286,867 + MPMX20_00269 0.11 -0.4
286,867 + MPMX20_00269 0.11 +0.1
286,871 + MPMX20_00269 0.12 +0.6
286,875 - MPMX20_00269 0.12 +0.9
286,875 - MPMX20_00269 0.12 -0.1
286,875 - MPMX20_00269 0.12 -1.0
286,921 + MPMX20_00269 0.16 -0.0
287,033 - MPMX20_00269 0.27 -0.6
287,047 + MPMX20_00269 0.28 +1.2
287,060 - MPMX20_00269 0.29 -2.1
287,074 + MPMX20_00269 0.30 +1.8
287,119 - MPMX20_00269 0.35 -2.6
287,129 - MPMX20_00269 0.35 +0.1
287,137 - MPMX20_00269 0.36 -0.8
287,173 + MPMX20_00269 0.40 -0.1
287,181 - MPMX20_00269 0.40 +1.5
287,181 - MPMX20_00269 0.40 +0.2
287,230 + MPMX20_00269 0.45 +2.4
287,248 - MPMX20_00269 0.46 -1.2
287,249 - MPMX20_00269 0.47 +0.1
287,299 + MPMX20_00269 0.51 -1.9
287,302 - MPMX20_00269 0.51 -0.8
287,307 - MPMX20_00269 0.52 -2.4
287,314 + MPMX20_00269 0.53 -1.3
287,322 - MPMX20_00269 0.53 +2.0
287,355 + MPMX20_00269 0.56 -1.7
287,355 + MPMX20_00269 0.56 -1.1
287,357 + MPMX20_00269 0.57 +1.1
287,363 - MPMX20_00269 0.57 +0.1
287,363 - MPMX20_00269 0.57 -1.0
287,422 - MPMX20_00269 0.63 +0.2
287,544 - MPMX20_00269 0.74 -0.1
287,610 - MPMX20_00269 0.80 -1.6
287,612 + MPMX20_00269 0.80 -1.0
287,620 - MPMX20_00269 0.81 +2.4
287,663 - MPMX20_00269 0.85 -1.4
287,690 + MPMX20_00269 0.87 +4.4
287,698 - MPMX20_00269 0.88 +0.4
287,698 - MPMX20_00269 0.88 +0.4
287,714 + MPMX20_00269 0.90 -1.7
287,726 + +0.5

Or see this region's nucleotide sequence