Experiment: M9 plate, 1:1 coculture with Agromyces sp. SAI_196
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03131 and MPMX20_03132 are separated by 16 nucleotides MPMX20_03132 and MPMX20_03133 overlap by 1 nucleotides
MPMX20_03131: MPMX20_03131 - PTS system fructose-specific EIIB'BC component, at 3,290,051 to 3,291,733
_03131
MPMX20_03132: MPMX20_03132 - Tagatose-6-phosphate kinase, at 3,291,750 to 3,292,688
_03132
MPMX20_03133: MPMX20_03133 - Multiphosphoryl transfer protein, at 3,292,688 to 3,293,818
_03133
Position (kb)
3291
3292
3293 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3290.905 kb on + strand, within MPMX20_03131 at 3290.997 kb on + strand, within MPMX20_03131 at 3291.047 kb on + strand, within MPMX20_03131 at 3291.066 kb on + strand, within MPMX20_03131 at 3291.132 kb on + strand, within MPMX20_03131 at 3291.189 kb on + strand, within MPMX20_03131 at 3291.257 kb on - strand, within MPMX20_03131 at 3291.257 kb on - strand, within MPMX20_03131 at 3291.277 kb on + strand, within MPMX20_03131 at 3291.285 kb on - strand, within MPMX20_03131 at 3291.475 kb on - strand, within MPMX20_03131 at 3291.508 kb on + strand, within MPMX20_03131 at 3291.508 kb on + strand, within MPMX20_03131 at 3291.514 kb on + strand, within MPMX20_03131 at 3291.623 kb on - strand at 3291.671 kb on + strand at 3291.797 kb on + strand at 3291.805 kb on - strand at 3291.830 kb on - strand at 3291.887 kb on - strand, within MPMX20_03132 at 3291.906 kb on - strand, within MPMX20_03132 at 3291.906 kb on - strand, within MPMX20_03132 at 3292.007 kb on - strand, within MPMX20_03132 at 3292.036 kb on + strand, within MPMX20_03132 at 3292.036 kb on + strand, within MPMX20_03132 at 3292.036 kb on + strand, within MPMX20_03132 at 3292.044 kb on - strand, within MPMX20_03132 at 3292.055 kb on + strand, within MPMX20_03132 at 3292.063 kb on - strand, within MPMX20_03132 at 3292.102 kb on - strand, within MPMX20_03132 at 3292.102 kb on - strand, within MPMX20_03132 at 3292.118 kb on - strand, within MPMX20_03132 at 3292.150 kb on - strand, within MPMX20_03132 at 3292.175 kb on + strand, within MPMX20_03132 at 3292.230 kb on - strand, within MPMX20_03132 at 3292.230 kb on - strand, within MPMX20_03132 at 3292.252 kb on - strand, within MPMX20_03132 at 3292.286 kb on - strand, within MPMX20_03132 at 3292.298 kb on + strand, within MPMX20_03132 at 3292.303 kb on + strand, within MPMX20_03132 at 3292.311 kb on - strand, within MPMX20_03132 at 3292.311 kb on - strand, within MPMX20_03132 at 3292.332 kb on + strand, within MPMX20_03132 at 3292.342 kb on + strand, within MPMX20_03132 at 3292.425 kb on + strand, within MPMX20_03132 at 3292.425 kb on + strand, within MPMX20_03132 at 3292.433 kb on - strand, within MPMX20_03132 at 3292.465 kb on + strand, within MPMX20_03132 at 3292.497 kb on - strand, within MPMX20_03132 at 3292.571 kb on - strand, within MPMX20_03132 at 3292.583 kb on + strand, within MPMX20_03132 at 3292.591 kb on - strand, within MPMX20_03132 at 3292.591 kb on - strand, within MPMX20_03132 at 3292.591 kb on - strand, within MPMX20_03132 at 3292.606 kb on + strand at 3292.707 kb on - strand at 3292.707 kb on - strand at 3292.707 kb on - strand at 3292.707 kb on - strand at 3292.752 kb on + strand at 3292.799 kb on - strand at 3292.827 kb on - strand, within MPMX20_03133 at 3292.885 kb on + strand, within MPMX20_03133 at 3292.927 kb on - strand, within MPMX20_03133 at 3292.968 kb on + strand, within MPMX20_03133 at 3292.981 kb on + strand, within MPMX20_03133 at 3292.989 kb on - strand, within MPMX20_03133 at 3293.232 kb on - strand, within MPMX20_03133 at 3293.319 kb on + strand, within MPMX20_03133 at 3293.416 kb on + strand, within MPMX20_03133 at 3293.436 kb on + strand, within MPMX20_03133 at 3293.436 kb on + strand, within MPMX20_03133 at 3293.436 kb on + strand, within MPMX20_03133 at 3293.477 kb on + strand, within MPMX20_03133 at 3293.478 kb on - strand, within MPMX20_03133 at 3293.556 kb on + strand, within MPMX20_03133 at 3293.605 kb on - strand, within MPMX20_03133 at 3293.619 kb on - strand, within MPMX20_03133 at 3293.623 kb on + strand, within MPMX20_03133 at 3293.623 kb on + strand, within MPMX20_03133 at 3293.623 kb on + strand, within MPMX20_03133 at 3293.631 kb on - strand, within MPMX20_03133 at 3293.631 kb on - strand, within MPMX20_03133 at 3293.631 kb on - strand, within MPMX20_03133 at 3293.631 kb on - strand, within MPMX20_03133 at 3293.631 kb on - strand, within MPMX20_03133
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Agromyces sp. SAI_196 remove 3,290,905 + MPMX20_03131 0.51 -0.5 3,290,997 + MPMX20_03131 0.56 -2.2 3,291,047 + MPMX20_03131 0.59 +0.2 3,291,066 + MPMX20_03131 0.60 -0.2 3,291,132 + MPMX20_03131 0.64 +2.0 3,291,189 + MPMX20_03131 0.68 -0.1 3,291,257 - MPMX20_03131 0.72 -0.9 3,291,257 - MPMX20_03131 0.72 -1.5 3,291,277 + MPMX20_03131 0.73 +0.3 3,291,285 - MPMX20_03131 0.73 +1.3 3,291,475 - MPMX20_03131 0.85 -2.4 3,291,508 + MPMX20_03131 0.87 +1.1 3,291,508 + MPMX20_03131 0.87 +0.1 3,291,514 + MPMX20_03131 0.87 +0.9 3,291,623 - -0.2 3,291,671 + +1.1 3,291,797 + -0.7 3,291,805 - -0.5 3,291,830 - -0.8 3,291,887 - MPMX20_03132 0.15 -1.3 3,291,906 - MPMX20_03132 0.17 -2.1 3,291,906 - MPMX20_03132 0.17 -2.1 3,292,007 - MPMX20_03132 0.27 +0.1 3,292,036 + MPMX20_03132 0.30 -0.6 3,292,036 + MPMX20_03132 0.30 -1.4 3,292,036 + MPMX20_03132 0.30 -1.4 3,292,044 - MPMX20_03132 0.31 -1.4 3,292,055 + MPMX20_03132 0.32 +0.5 3,292,063 - MPMX20_03132 0.33 -2.3 3,292,102 - MPMX20_03132 0.37 +2.6 3,292,102 - MPMX20_03132 0.37 -1.1 3,292,118 - MPMX20_03132 0.39 -1.5 3,292,150 - MPMX20_03132 0.43 -0.7 3,292,175 + MPMX20_03132 0.45 -1.1 3,292,230 - MPMX20_03132 0.51 -1.2 3,292,230 - MPMX20_03132 0.51 +2.6 3,292,252 - MPMX20_03132 0.53 +0.1 3,292,286 - MPMX20_03132 0.57 -0.7 3,292,298 + MPMX20_03132 0.58 -1.3 3,292,303 + MPMX20_03132 0.59 +2.2 3,292,311 - MPMX20_03132 0.60 -2.1 3,292,311 - MPMX20_03132 0.60 +0.6 3,292,332 + MPMX20_03132 0.62 -1.2 3,292,342 + MPMX20_03132 0.63 +0.6 3,292,425 + MPMX20_03132 0.72 -2.2 3,292,425 + MPMX20_03132 0.72 -2.2 3,292,433 - MPMX20_03132 0.73 -0.8 3,292,465 + MPMX20_03132 0.76 -2.6 3,292,497 - MPMX20_03132 0.80 -2.4 3,292,571 - MPMX20_03132 0.87 -0.8 3,292,583 + MPMX20_03132 0.89 -0.4 3,292,591 - MPMX20_03132 0.90 -1.9 3,292,591 - MPMX20_03132 0.90 +0.6 3,292,591 - MPMX20_03132 0.90 -1.6 3,292,606 + -1.4 3,292,707 - +1.5 3,292,707 - +1.2 3,292,707 - -2.3 3,292,707 - -0.9 3,292,752 + +0.1 3,292,799 - -1.3 3,292,827 - MPMX20_03133 0.12 +0.6 3,292,885 + MPMX20_03133 0.17 -2.1 3,292,927 - MPMX20_03133 0.21 -0.5 3,292,968 + MPMX20_03133 0.25 +1.2 3,292,981 + MPMX20_03133 0.26 +0.7 3,292,989 - MPMX20_03133 0.27 -3.7 3,293,232 - MPMX20_03133 0.48 -1.0 3,293,319 + MPMX20_03133 0.56 +0.6 3,293,416 + MPMX20_03133 0.64 +1.7 3,293,436 + MPMX20_03133 0.66 -0.3 3,293,436 + MPMX20_03133 0.66 -2.9 3,293,436 + MPMX20_03133 0.66 +0.3 3,293,477 + MPMX20_03133 0.70 +1.1 3,293,478 - MPMX20_03133 0.70 +0.9 3,293,556 + MPMX20_03133 0.77 +1.2 3,293,605 - MPMX20_03133 0.81 -1.7 3,293,619 - MPMX20_03133 0.82 -1.3 3,293,623 + MPMX20_03133 0.83 +0.8 3,293,623 + MPMX20_03133 0.83 +0.7 3,293,623 + MPMX20_03133 0.83 -1.6 3,293,631 - MPMX20_03133 0.83 +1.1 3,293,631 - MPMX20_03133 0.83 +1.1 3,293,631 - MPMX20_03133 0.83 -1.5 3,293,631 - MPMX20_03133 0.83 +4.2 3,293,631 - MPMX20_03133 0.83 -3.0
Or see this region's nucleotide sequence