Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01036

Experiment: M9 plate, 1:1 coculture with Agromyces sp. SAI_196

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01034 and MPMX20_01035 are separated by 60 nucleotidesMPMX20_01035 and MPMX20_01036 are separated by 66 nucleotidesMPMX20_01036 and MPMX20_01037 are separated by 101 nucleotidesMPMX20_01037 and MPMX20_01038 are separated by 41 nucleotides MPMX20_01034: MPMX20_01034 - Long-chain acyl-CoA thioesterase FadM, at 1,089,574 to 1,089,972 _01034 MPMX20_01035: MPMX20_01035 - 7-cyano-7-deazaguanine synthase, at 1,090,033 to 1,090,728 _01035 MPMX20_01036: MPMX20_01036 - HTH-type transcriptional regulator SgrR, at 1,090,795 to 1,092,495 _01036 MPMX20_01037: MPMX20_01037 - HMP-PP phosphatase, at 1,092,597 to 1,093,415 _01037 MPMX20_01038: MPMX20_01038 - N-(2-amino-2-carboxyethyl)-L-glutamate synthase, at 1,093,457 to 1,094,503 _01038 Position (kb) 1090 1091 1092 1093Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 1089.796 kb on - strand, within MPMX20_01034at 1089.834 kb on - strand, within MPMX20_01034at 1089.861 kb on - strand, within MPMX20_01034at 1089.890 kb on - strand, within MPMX20_01034at 1089.894 kb on - strand, within MPMX20_01034at 1089.957 kb on + strandat 1090.116 kb on + strand, within MPMX20_01035at 1090.134 kb on + strand, within MPMX20_01035at 1090.134 kb on + strand, within MPMX20_01035at 1090.141 kb on + strand, within MPMX20_01035at 1090.142 kb on - strand, within MPMX20_01035at 1090.142 kb on - strand, within MPMX20_01035at 1090.176 kb on - strand, within MPMX20_01035at 1090.308 kb on - strand, within MPMX20_01035at 1090.315 kb on - strand, within MPMX20_01035at 1090.440 kb on + strand, within MPMX20_01035at 1090.440 kb on + strand, within MPMX20_01035at 1090.448 kb on - strand, within MPMX20_01035at 1090.448 kb on - strand, within MPMX20_01035at 1090.480 kb on - strand, within MPMX20_01035at 1090.488 kb on + strand, within MPMX20_01035at 1090.543 kb on + strand, within MPMX20_01035at 1090.551 kb on - strand, within MPMX20_01035at 1090.584 kb on + strand, within MPMX20_01035at 1090.659 kb on + strandat 1090.708 kb on - strandat 1090.847 kb on + strandat 1090.854 kb on + strandat 1090.987 kb on + strand, within MPMX20_01036at 1091.016 kb on + strand, within MPMX20_01036at 1091.076 kb on + strand, within MPMX20_01036at 1091.083 kb on + strand, within MPMX20_01036at 1091.083 kb on + strand, within MPMX20_01036at 1091.084 kb on - strand, within MPMX20_01036at 1091.097 kb on - strand, within MPMX20_01036at 1091.125 kb on - strand, within MPMX20_01036at 1091.217 kb on + strand, within MPMX20_01036at 1091.237 kb on + strand, within MPMX20_01036at 1091.319 kb on - strand, within MPMX20_01036at 1091.338 kb on + strand, within MPMX20_01036at 1091.370 kb on + strand, within MPMX20_01036at 1091.372 kb on - strand, within MPMX20_01036at 1091.390 kb on + strand, within MPMX20_01036at 1091.509 kb on + strand, within MPMX20_01036at 1091.517 kb on - strand, within MPMX20_01036at 1091.577 kb on - strand, within MPMX20_01036at 1091.672 kb on - strand, within MPMX20_01036at 1091.694 kb on - strand, within MPMX20_01036at 1091.705 kb on + strand, within MPMX20_01036at 1091.713 kb on - strand, within MPMX20_01036at 1091.769 kb on + strand, within MPMX20_01036at 1091.775 kb on - strand, within MPMX20_01036at 1091.790 kb on + strand, within MPMX20_01036at 1091.814 kb on + strand, within MPMX20_01036at 1091.814 kb on + strand, within MPMX20_01036at 1091.822 kb on - strand, within MPMX20_01036at 1091.845 kb on + strand, within MPMX20_01036at 1091.912 kb on + strand, within MPMX20_01036at 1091.926 kb on - strand, within MPMX20_01036at 1091.985 kb on + strand, within MPMX20_01036at 1092.038 kb on + strand, within MPMX20_01036at 1092.061 kb on - strand, within MPMX20_01036at 1092.135 kb on + strand, within MPMX20_01036at 1092.208 kb on - strand, within MPMX20_01036at 1092.210 kb on + strand, within MPMX20_01036at 1092.218 kb on - strand, within MPMX20_01036at 1092.236 kb on + strand, within MPMX20_01036at 1092.244 kb on - strand, within MPMX20_01036at 1092.268 kb on - strand, within MPMX20_01036at 1092.636 kb on - strandat 1092.674 kb on - strandat 1092.675 kb on + strandat 1092.702 kb on - strand, within MPMX20_01037at 1092.732 kb on - strand, within MPMX20_01037at 1092.740 kb on - strand, within MPMX20_01037at 1092.813 kb on + strand, within MPMX20_01037at 1092.813 kb on + strand, within MPMX20_01037at 1092.821 kb on - strand, within MPMX20_01037at 1092.833 kb on - strand, within MPMX20_01037at 1092.887 kb on - strand, within MPMX20_01037at 1092.898 kb on + strand, within MPMX20_01037at 1092.965 kb on + strand, within MPMX20_01037at 1092.968 kb on + strand, within MPMX20_01037at 1092.973 kb on - strand, within MPMX20_01037at 1092.976 kb on - strand, within MPMX20_01037at 1092.990 kb on - strand, within MPMX20_01037at 1093.077 kb on + strand, within MPMX20_01037at 1093.107 kb on + strand, within MPMX20_01037at 1093.107 kb on + strand, within MPMX20_01037at 1093.135 kb on - strand, within MPMX20_01037at 1093.186 kb on + strand, within MPMX20_01037at 1093.191 kb on + strand, within MPMX20_01037at 1093.199 kb on - strand, within MPMX20_01037at 1093.199 kb on - strand, within MPMX20_01037at 1093.301 kb on + strand, within MPMX20_01037at 1093.301 kb on + strand, within MPMX20_01037at 1093.301 kb on + strand, within MPMX20_01037at 1093.306 kb on + strand, within MPMX20_01037at 1093.309 kb on - strand, within MPMX20_01037at 1093.309 kb on - strand, within MPMX20_01037at 1093.326 kb on - strand, within MPMX20_01037at 1093.345 kb on - strandat 1093.386 kb on - strandat 1093.402 kb on - strandat 1093.432 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Agromyces sp. SAI_196
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1,089,796 - MPMX20_01034 0.56 -2.7
1,089,834 - MPMX20_01034 0.65 +1.1
1,089,861 - MPMX20_01034 0.72 +0.5
1,089,890 - MPMX20_01034 0.79 +0.5
1,089,894 - MPMX20_01034 0.80 -1.7
1,089,957 + -2.9
1,090,116 + MPMX20_01035 0.12 -1.2
1,090,134 + MPMX20_01035 0.15 -2.4
1,090,134 + MPMX20_01035 0.15 +2.3
1,090,141 + MPMX20_01035 0.16 +0.5
1,090,142 - MPMX20_01035 0.16 +0.8
1,090,142 - MPMX20_01035 0.16 -0.0
1,090,176 - MPMX20_01035 0.21 -0.3
1,090,308 - MPMX20_01035 0.40 +1.5
1,090,315 - MPMX20_01035 0.41 +0.5
1,090,440 + MPMX20_01035 0.58 +0.2
1,090,440 + MPMX20_01035 0.58 +0.5
1,090,448 - MPMX20_01035 0.60 -1.8
1,090,448 - MPMX20_01035 0.60 -0.9
1,090,480 - MPMX20_01035 0.64 +1.5
1,090,488 + MPMX20_01035 0.65 -0.1
1,090,543 + MPMX20_01035 0.73 +0.8
1,090,551 - MPMX20_01035 0.74 +0.9
1,090,584 + MPMX20_01035 0.79 -2.2
1,090,659 + -1.7
1,090,708 - +1.5
1,090,847 + +0.4
1,090,854 + +1.7
1,090,987 + MPMX20_01036 0.11 -3.3
1,091,016 + MPMX20_01036 0.13 +1.0
1,091,076 + MPMX20_01036 0.17 -2.3
1,091,083 + MPMX20_01036 0.17 +0.9
1,091,083 + MPMX20_01036 0.17 -2.6
1,091,084 - MPMX20_01036 0.17 +2.6
1,091,097 - MPMX20_01036 0.18 -2.1
1,091,125 - MPMX20_01036 0.19 -0.8
1,091,217 + MPMX20_01036 0.25 -1.7
1,091,237 + MPMX20_01036 0.26 -0.3
1,091,319 - MPMX20_01036 0.31 -0.8
1,091,338 + MPMX20_01036 0.32 +1.0
1,091,370 + MPMX20_01036 0.34 -2.7
1,091,372 - MPMX20_01036 0.34 +0.0
1,091,390 + MPMX20_01036 0.35 +0.3
1,091,509 + MPMX20_01036 0.42 -0.8
1,091,517 - MPMX20_01036 0.42 +0.7
1,091,577 - MPMX20_01036 0.46 -0.1
1,091,672 - MPMX20_01036 0.52 +1.1
1,091,694 - MPMX20_01036 0.53 -0.6
1,091,705 + MPMX20_01036 0.53 +0.1
1,091,713 - MPMX20_01036 0.54 -1.0
1,091,769 + MPMX20_01036 0.57 -0.9
1,091,775 - MPMX20_01036 0.58 -0.1
1,091,790 + MPMX20_01036 0.58 +5.3
1,091,814 + MPMX20_01036 0.60 -0.3
1,091,814 + MPMX20_01036 0.60 +3.7
1,091,822 - MPMX20_01036 0.60 +4.6
1,091,845 + MPMX20_01036 0.62 +0.9
1,091,912 + MPMX20_01036 0.66 -0.8
1,091,926 - MPMX20_01036 0.66 -0.7
1,091,985 + MPMX20_01036 0.70 +0.1
1,092,038 + MPMX20_01036 0.73 -0.4
1,092,061 - MPMX20_01036 0.74 -0.2
1,092,135 + MPMX20_01036 0.79 +2.5
1,092,208 - MPMX20_01036 0.83 +0.2
1,092,210 + MPMX20_01036 0.83 +0.9
1,092,218 - MPMX20_01036 0.84 -2.2
1,092,236 + MPMX20_01036 0.85 +0.3
1,092,244 - MPMX20_01036 0.85 +3.6
1,092,268 - MPMX20_01036 0.87 +1.5
1,092,636 - -2.9
1,092,674 - +0.9
1,092,675 + -3.4
1,092,702 - MPMX20_01037 0.13 -0.5
1,092,732 - MPMX20_01037 0.16 -2.8
1,092,740 - MPMX20_01037 0.17 -2.2
1,092,813 + MPMX20_01037 0.26 -1.0
1,092,813 + MPMX20_01037 0.26 -2.1
1,092,821 - MPMX20_01037 0.27 +0.9
1,092,833 - MPMX20_01037 0.29 -0.3
1,092,887 - MPMX20_01037 0.35 -2.4
1,092,898 + MPMX20_01037 0.37 +0.5
1,092,965 + MPMX20_01037 0.45 -0.3
1,092,968 + MPMX20_01037 0.45 -2.5
1,092,973 - MPMX20_01037 0.46 -0.2
1,092,976 - MPMX20_01037 0.46 -1.6
1,092,990 - MPMX20_01037 0.48 +0.2
1,093,077 + MPMX20_01037 0.59 +0.8
1,093,107 + MPMX20_01037 0.62 -0.2
1,093,107 + MPMX20_01037 0.62 +0.3
1,093,135 - MPMX20_01037 0.66 +0.2
1,093,186 + MPMX20_01037 0.72 -1.1
1,093,191 + MPMX20_01037 0.73 -1.7
1,093,199 - MPMX20_01037 0.74 -2.2
1,093,199 - MPMX20_01037 0.74 -2.3
1,093,301 + MPMX20_01037 0.86 +1.9
1,093,301 + MPMX20_01037 0.86 +2.0
1,093,301 + MPMX20_01037 0.86 -0.4
1,093,306 + MPMX20_01037 0.87 -1.3
1,093,309 - MPMX20_01037 0.87 -0.3
1,093,309 - MPMX20_01037 0.87 -1.9
1,093,326 - MPMX20_01037 0.89 +0.2
1,093,345 - +0.6
1,093,386 - +1.0
1,093,402 - +0.2
1,093,432 + -1.2

Or see this region's nucleotide sequence