Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03792

Experiment: 0.1X LB plate, 1:1 coculture with Chryseobacterium gleum TBS_021

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03791 and MPMX20_03792 are separated by 78 nucleotidesMPMX20_03792 and MPMX20_03793 are separated by 12 nucleotidesMPMX20_03793 and MPMX20_03794 overlap by 1 nucleotides MPMX20_03791: MPMX20_03791 - hypothetical protein, at 3,996,623 to 3,997,549 _03791 MPMX20_03792: MPMX20_03792 - Pca regulon regulatory protein, at 3,997,628 to 3,998,416 _03792 MPMX20_03793: MPMX20_03793 - Pyridoxal 4-dehydrogenase, at 3,998,429 to 3,999,178 _03793 MPMX20_03794: MPMX20_03794 - hypothetical protein, at 3,999,178 to 4,000,200 _03794 Position (kb) 3997 3998 3999Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7 8at 3996.628 kb on - strandat 3996.667 kb on - strandat 3996.669 kb on + strandat 3996.679 kb on + strandat 3996.712 kb on + strandat 3996.712 kb on + strandat 3996.720 kb on - strand, within MPMX20_03791at 3996.772 kb on - strand, within MPMX20_03791at 3996.923 kb on + strand, within MPMX20_03791at 3996.923 kb on + strand, within MPMX20_03791at 3996.923 kb on + strand, within MPMX20_03791at 3997.045 kb on + strand, within MPMX20_03791at 3997.053 kb on - strand, within MPMX20_03791at 3997.135 kb on + strand, within MPMX20_03791at 3997.135 kb on + strand, within MPMX20_03791at 3997.135 kb on + strand, within MPMX20_03791at 3997.143 kb on - strand, within MPMX20_03791at 3997.185 kb on + strand, within MPMX20_03791at 3997.200 kb on - strand, within MPMX20_03791at 3997.204 kb on + strand, within MPMX20_03791at 3997.212 kb on - strand, within MPMX20_03791at 3997.228 kb on + strand, within MPMX20_03791at 3997.230 kb on + strand, within MPMX20_03791at 3997.236 kb on - strand, within MPMX20_03791at 3997.236 kb on - strand, within MPMX20_03791at 3997.236 kb on - strand, within MPMX20_03791at 3997.236 kb on - strand, within MPMX20_03791at 3997.236 kb on - strand, within MPMX20_03791at 3997.236 kb on - strand, within MPMX20_03791at 3997.320 kb on - strand, within MPMX20_03791at 3997.338 kb on + strand, within MPMX20_03791at 3997.382 kb on + strand, within MPMX20_03791at 3997.387 kb on + strand, within MPMX20_03791at 3997.387 kb on + strand, within MPMX20_03791at 3997.392 kb on + strand, within MPMX20_03791at 3997.427 kb on + strand, within MPMX20_03791at 3997.427 kb on + strand, within MPMX20_03791at 3997.432 kb on + strand, within MPMX20_03791at 3997.435 kb on - strand, within MPMX20_03791at 3997.435 kb on - strand, within MPMX20_03791at 3997.437 kb on + strand, within MPMX20_03791at 3997.506 kb on - strandat 3997.562 kb on + strandat 3997.567 kb on + strandat 3997.576 kb on - strandat 3997.726 kb on + strand, within MPMX20_03792at 3997.738 kb on + strand, within MPMX20_03792at 3997.775 kb on + strand, within MPMX20_03792at 3997.845 kb on + strand, within MPMX20_03792at 3997.897 kb on - strand, within MPMX20_03792at 3997.902 kb on - strand, within MPMX20_03792at 3997.907 kb on + strand, within MPMX20_03792at 3997.986 kb on + strand, within MPMX20_03792at 3997.991 kb on + strand, within MPMX20_03792at 3998.021 kb on - strand, within MPMX20_03792at 3998.043 kb on + strand, within MPMX20_03792at 3998.058 kb on + strand, within MPMX20_03792at 3998.107 kb on + strand, within MPMX20_03792at 3998.130 kb on - strand, within MPMX20_03792at 3998.214 kb on + strand, within MPMX20_03792at 3998.222 kb on - strand, within MPMX20_03792at 3998.301 kb on + strand, within MPMX20_03792at 3998.301 kb on + strand, within MPMX20_03792at 3998.304 kb on - strand, within MPMX20_03792at 3998.311 kb on + strand, within MPMX20_03792at 3998.334 kb on - strand, within MPMX20_03792at 3998.359 kb on + strandat 3998.383 kb on + strandat 3998.383 kb on + strandat 3998.390 kb on + strandat 3998.507 kb on - strand, within MPMX20_03793at 3998.612 kb on + strand, within MPMX20_03793at 3998.612 kb on + strand, within MPMX20_03793at 3998.612 kb on + strand, within MPMX20_03793at 3998.620 kb on - strand, within MPMX20_03793at 3998.620 kb on - strand, within MPMX20_03793at 3998.620 kb on - strand, within MPMX20_03793at 3998.620 kb on - strand, within MPMX20_03793at 3998.667 kb on - strand, within MPMX20_03793at 3998.667 kb on - strand, within MPMX20_03793at 3998.678 kb on + strand, within MPMX20_03793at 3998.797 kb on + strand, within MPMX20_03793at 3998.797 kb on + strand, within MPMX20_03793at 3998.820 kb on + strand, within MPMX20_03793at 3998.854 kb on - strand, within MPMX20_03793at 3998.872 kb on + strand, within MPMX20_03793at 3998.949 kb on + strand, within MPMX20_03793at 3998.967 kb on + strand, within MPMX20_03793at 3998.995 kb on + strand, within MPMX20_03793at 3999.022 kb on + strand, within MPMX20_03793at 3999.022 kb on + strand, within MPMX20_03793at 3999.030 kb on - strand, within MPMX20_03793at 3999.058 kb on + strand, within MPMX20_03793at 3999.086 kb on + strand, within MPMX20_03793at 3999.091 kb on + strand, within MPMX20_03793at 3999.094 kb on - strand, within MPMX20_03793at 3999.099 kb on - strand, within MPMX20_03793at 3999.280 kb on + strandat 3999.328 kb on + strand, within MPMX20_03794

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Chryseobacterium gleum TBS_021
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3,996,628 - +0.1
3,996,667 - -0.1
3,996,669 + +0.4
3,996,679 + +0.6
3,996,712 + -1.6
3,996,712 + +1.4
3,996,720 - MPMX20_03791 0.10 -0.7
3,996,772 - MPMX20_03791 0.16 +0.0
3,996,923 + MPMX20_03791 0.32 +0.0
3,996,923 + MPMX20_03791 0.32 +0.4
3,996,923 + MPMX20_03791 0.32 +0.2
3,997,045 + MPMX20_03791 0.46 -1.2
3,997,053 - MPMX20_03791 0.46 -0.6
3,997,135 + MPMX20_03791 0.55 -0.8
3,997,135 + MPMX20_03791 0.55 +2.2
3,997,135 + MPMX20_03791 0.55 +0.8
3,997,143 - MPMX20_03791 0.56 +1.3
3,997,185 + MPMX20_03791 0.61 -0.2
3,997,200 - MPMX20_03791 0.62 +2.2
3,997,204 + MPMX20_03791 0.63 -0.4
3,997,212 - MPMX20_03791 0.64 -0.2
3,997,228 + MPMX20_03791 0.65 +1.0
3,997,230 + MPMX20_03791 0.65 -2.3
3,997,236 - MPMX20_03791 0.66 +1.0
3,997,236 - MPMX20_03791 0.66 -1.0
3,997,236 - MPMX20_03791 0.66 +0.2
3,997,236 - MPMX20_03791 0.66 -2.1
3,997,236 - MPMX20_03791 0.66 -0.5
3,997,236 - MPMX20_03791 0.66 -0.7
3,997,320 - MPMX20_03791 0.75 +0.2
3,997,338 + MPMX20_03791 0.77 +0.6
3,997,382 + MPMX20_03791 0.82 +0.4
3,997,387 + MPMX20_03791 0.82 -0.5
3,997,387 + MPMX20_03791 0.82 -1.2
3,997,392 + MPMX20_03791 0.83 -0.3
3,997,427 + MPMX20_03791 0.87 +0.8
3,997,427 + MPMX20_03791 0.87 -0.7
3,997,432 + MPMX20_03791 0.87 +0.9
3,997,435 - MPMX20_03791 0.88 +0.9
3,997,435 - MPMX20_03791 0.88 -0.4
3,997,437 + MPMX20_03791 0.88 -0.7
3,997,506 - -1.3
3,997,562 + +0.0
3,997,567 + -0.4
3,997,576 - -0.2
3,997,726 + MPMX20_03792 0.12 -0.2
3,997,738 + MPMX20_03792 0.14 +2.6
3,997,775 + MPMX20_03792 0.19 +1.2
3,997,845 + MPMX20_03792 0.28 +1.4
3,997,897 - MPMX20_03792 0.34 -0.2
3,997,902 - MPMX20_03792 0.35 +0.2
3,997,907 + MPMX20_03792 0.35 +0.1
3,997,986 + MPMX20_03792 0.45 -0.4
3,997,991 + MPMX20_03792 0.46 -1.4
3,998,021 - MPMX20_03792 0.50 -0.2
3,998,043 + MPMX20_03792 0.53 +0.8
3,998,058 + MPMX20_03792 0.54 -0.7
3,998,107 + MPMX20_03792 0.61 +0.8
3,998,130 - MPMX20_03792 0.64 +0.3
3,998,214 + MPMX20_03792 0.74 +0.1
3,998,222 - MPMX20_03792 0.75 -0.3
3,998,301 + MPMX20_03792 0.85 +0.2
3,998,301 + MPMX20_03792 0.85 +0.2
3,998,304 - MPMX20_03792 0.86 +1.6
3,998,311 + MPMX20_03792 0.87 +0.8
3,998,334 - MPMX20_03792 0.89 -0.2
3,998,359 + -0.6
3,998,383 + -0.8
3,998,383 + +0.4
3,998,390 + -0.2
3,998,507 - MPMX20_03793 0.10 +7.8
3,998,612 + MPMX20_03793 0.24 +1.3
3,998,612 + MPMX20_03793 0.24 -0.0
3,998,612 + MPMX20_03793 0.24 -0.9
3,998,620 - MPMX20_03793 0.25 +2.2
3,998,620 - MPMX20_03793 0.25 -0.5
3,998,620 - MPMX20_03793 0.25 +0.4
3,998,620 - MPMX20_03793 0.25 +0.3
3,998,667 - MPMX20_03793 0.32 -0.2
3,998,667 - MPMX20_03793 0.32 -1.5
3,998,678 + MPMX20_03793 0.33 -1.7
3,998,797 + MPMX20_03793 0.49 -0.1
3,998,797 + MPMX20_03793 0.49 +0.2
3,998,820 + MPMX20_03793 0.52 +0.2
3,998,854 - MPMX20_03793 0.57 +0.7
3,998,872 + MPMX20_03793 0.59 +1.6
3,998,949 + MPMX20_03793 0.69 +1.1
3,998,967 + MPMX20_03793 0.72 -0.0
3,998,995 + MPMX20_03793 0.75 -0.4
3,999,022 + MPMX20_03793 0.79 -0.3
3,999,022 + MPMX20_03793 0.79 -0.4
3,999,030 - MPMX20_03793 0.80 -0.5
3,999,058 + MPMX20_03793 0.84 -0.9
3,999,086 + MPMX20_03793 0.88 +0.0
3,999,091 + MPMX20_03793 0.88 -0.8
3,999,094 - MPMX20_03793 0.89 -0.0
3,999,099 - MPMX20_03793 0.89 -1.3
3,999,280 + -1.1
3,999,328 + MPMX20_03794 0.15 -0.2

Or see this region's nucleotide sequence