Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01276

Experiment: 0.1X LB plate, 1:1 coculture with Chryseobacterium gleum TBS_021

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01274 and MPMX20_01275 are separated by 9 nucleotidesMPMX20_01275 and MPMX20_01276 are separated by 137 nucleotidesMPMX20_01276 and MPMX20_01277 are separated by 254 nucleotides MPMX20_01274: MPMX20_01274 - putative zinc-binding alcohol dehydrogenase, at 1,338,484 to 1,339,722 _01274 MPMX20_01275: MPMX20_01275 - hypothetical protein, at 1,339,732 to 1,339,821 _01275 MPMX20_01276: MPMX20_01276 - Regulator of nucleoside diphosphate kinase, at 1,339,959 to 1,340,369 _01276 MPMX20_01277: MPMX20_01277 - Non-heme chloroperoxidase, at 1,340,624 to 1,341,454 _01277 Position (kb) 1339 1340 1341Strain fitness (log2 ratio) -2 -1 0 1 2at 1338.984 kb on - strand, within MPMX20_01274at 1338.989 kb on - strand, within MPMX20_01274at 1339.062 kb on - strand, within MPMX20_01274at 1339.117 kb on + strand, within MPMX20_01274at 1339.125 kb on - strand, within MPMX20_01274at 1339.125 kb on - strand, within MPMX20_01274at 1339.167 kb on + strand, within MPMX20_01274at 1339.193 kb on + strand, within MPMX20_01274at 1339.246 kb on - strand, within MPMX20_01274at 1339.248 kb on + strand, within MPMX20_01274at 1339.256 kb on - strand, within MPMX20_01274at 1339.346 kb on - strand, within MPMX20_01274at 1339.400 kb on + strand, within MPMX20_01274at 1339.551 kb on + strand, within MPMX20_01274at 1339.687 kb on + strandat 1339.687 kb on + strandat 1339.692 kb on + strandat 1339.692 kb on + strandat 1339.695 kb on - strandat 1339.748 kb on + strand, within MPMX20_01275at 1339.756 kb on - strand, within MPMX20_01275at 1339.756 kb on - strand, within MPMX20_01275at 1339.806 kb on + strand, within MPMX20_01275at 1339.814 kb on - strandat 1339.844 kb on - strandat 1339.854 kb on - strandat 1339.854 kb on - strandat 1339.854 kb on - strandat 1339.858 kb on + strandat 1339.858 kb on + strandat 1339.866 kb on - strandat 1339.877 kb on + strandat 1339.924 kb on - strandat 1339.931 kb on - strandat 1339.931 kb on - strandat 1339.936 kb on - strandat 1339.965 kb on - strandat 1340.054 kb on - strand, within MPMX20_01276at 1340.101 kb on + strand, within MPMX20_01276at 1340.109 kb on - strand, within MPMX20_01276at 1340.137 kb on + strand, within MPMX20_01276at 1340.137 kb on + strand, within MPMX20_01276at 1340.145 kb on - strand, within MPMX20_01276at 1340.145 kb on - strand, within MPMX20_01276at 1340.145 kb on - strand, within MPMX20_01276at 1340.162 kb on + strand, within MPMX20_01276at 1340.167 kb on - strand, within MPMX20_01276at 1340.167 kb on - strand, within MPMX20_01276at 1340.170 kb on - strand, within MPMX20_01276at 1340.213 kb on + strand, within MPMX20_01276at 1340.226 kb on + strand, within MPMX20_01276at 1340.228 kb on + strand, within MPMX20_01276at 1340.241 kb on + strand, within MPMX20_01276at 1340.244 kb on - strand, within MPMX20_01276at 1340.244 kb on - strand, within MPMX20_01276at 1340.292 kb on + strand, within MPMX20_01276at 1340.327 kb on - strand, within MPMX20_01276at 1340.384 kb on + strandat 1340.392 kb on - strandat 1340.446 kb on + strandat 1340.446 kb on + strandat 1340.464 kb on + strandat 1340.464 kb on - strandat 1340.472 kb on - strandat 1340.476 kb on + strandat 1340.483 kb on + strandat 1340.491 kb on - strandat 1340.581 kb on + strandat 1340.610 kb on - strandat 1340.618 kb on + strandat 1340.702 kb on + strandat 1340.704 kb on - strandat 1340.716 kb on - strand, within MPMX20_01277at 1340.802 kb on + strand, within MPMX20_01277at 1340.802 kb on + strand, within MPMX20_01277at 1340.821 kb on + strand, within MPMX20_01277at 1340.821 kb on + strand, within MPMX20_01277at 1340.821 kb on + strand, within MPMX20_01277at 1340.829 kb on - strand, within MPMX20_01277at 1340.829 kb on - strand, within MPMX20_01277at 1340.829 kb on - strand, within MPMX20_01277at 1340.829 kb on - strand, within MPMX20_01277at 1340.829 kb on - strand, within MPMX20_01277at 1340.829 kb on - strand, within MPMX20_01277at 1340.829 kb on - strand, within MPMX20_01277at 1340.844 kb on - strand, within MPMX20_01277at 1340.846 kb on - strand, within MPMX20_01277at 1340.861 kb on - strand, within MPMX20_01277at 1340.983 kb on + strand, within MPMX20_01277at 1341.060 kb on - strand, within MPMX20_01277at 1341.070 kb on - strand, within MPMX20_01277at 1341.092 kb on + strand, within MPMX20_01277at 1341.092 kb on + strand, within MPMX20_01277at 1341.100 kb on - strand, within MPMX20_01277at 1341.141 kb on + strand, within MPMX20_01277at 1341.159 kb on - strand, within MPMX20_01277at 1341.161 kb on + strand, within MPMX20_01277at 1341.169 kb on - strand, within MPMX20_01277at 1341.187 kb on - strand, within MPMX20_01277at 1341.209 kb on + strand, within MPMX20_01277at 1341.209 kb on + strand, within MPMX20_01277at 1341.209 kb on + strand, within MPMX20_01277at 1341.209 kb on + strand, within MPMX20_01277at 1341.209 kb on + strand, within MPMX20_01277at 1341.209 kb on + strand, within MPMX20_01277at 1341.209 kb on + strand, within MPMX20_01277at 1341.211 kb on + strand, within MPMX20_01277at 1341.217 kb on - strand, within MPMX20_01277at 1341.217 kb on - strand, within MPMX20_01277at 1341.217 kb on - strand, within MPMX20_01277at 1341.219 kb on - strand, within MPMX20_01277at 1341.329 kb on + strand, within MPMX20_01277at 1341.334 kb on + strand, within MPMX20_01277at 1341.357 kb on + strand, within MPMX20_01277at 1341.367 kb on + strand, within MPMX20_01277

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Chryseobacterium gleum TBS_021
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1,338,984 - MPMX20_01274 0.40 +0.3
1,338,989 - MPMX20_01274 0.41 +1.1
1,339,062 - MPMX20_01274 0.47 +0.2
1,339,117 + MPMX20_01274 0.51 +1.0
1,339,125 - MPMX20_01274 0.52 -0.7
1,339,125 - MPMX20_01274 0.52 -0.9
1,339,167 + MPMX20_01274 0.55 -0.8
1,339,193 + MPMX20_01274 0.57 +0.9
1,339,246 - MPMX20_01274 0.62 +1.5
1,339,248 + MPMX20_01274 0.62 +0.2
1,339,256 - MPMX20_01274 0.62 +1.2
1,339,346 - MPMX20_01274 0.70 -0.3
1,339,400 + MPMX20_01274 0.74 -0.6
1,339,551 + MPMX20_01274 0.86 -0.4
1,339,687 + +0.6
1,339,687 + -0.7
1,339,692 + -0.4
1,339,692 + +0.2
1,339,695 - -0.0
1,339,748 + MPMX20_01275 0.18 -1.0
1,339,756 - MPMX20_01275 0.27 -0.3
1,339,756 - MPMX20_01275 0.27 +1.2
1,339,806 + MPMX20_01275 0.82 +0.2
1,339,814 - +0.1
1,339,844 - -0.1
1,339,854 - +1.2
1,339,854 - +1.2
1,339,854 - +0.2
1,339,858 + -0.7
1,339,858 + +0.2
1,339,866 - +0.6
1,339,877 + +0.5
1,339,924 - -1.2
1,339,931 - +0.0
1,339,931 - +0.2
1,339,936 - -2.0
1,339,965 - -0.9
1,340,054 - MPMX20_01276 0.23 +0.1
1,340,101 + MPMX20_01276 0.35 -0.1
1,340,109 - MPMX20_01276 0.36 -1.0
1,340,137 + MPMX20_01276 0.43 +1.4
1,340,137 + MPMX20_01276 0.43 -0.6
1,340,145 - MPMX20_01276 0.45 -1.6
1,340,145 - MPMX20_01276 0.45 -0.1
1,340,145 - MPMX20_01276 0.45 +1.8
1,340,162 + MPMX20_01276 0.49 +0.5
1,340,167 - MPMX20_01276 0.51 +0.2
1,340,167 - MPMX20_01276 0.51 -0.1
1,340,170 - MPMX20_01276 0.51 +0.6
1,340,213 + MPMX20_01276 0.62 -0.0
1,340,226 + MPMX20_01276 0.65 -0.8
1,340,228 + MPMX20_01276 0.65 -1.4
1,340,241 + MPMX20_01276 0.69 +0.1
1,340,244 - MPMX20_01276 0.69 -0.6
1,340,244 - MPMX20_01276 0.69 +0.7
1,340,292 + MPMX20_01276 0.81 -0.6
1,340,327 - MPMX20_01276 0.90 +0.8
1,340,384 + +0.6
1,340,392 - +0.0
1,340,446 + +2.2
1,340,446 + +0.0
1,340,464 + -0.4
1,340,464 - -1.5
1,340,472 - +1.0
1,340,476 + -0.4
1,340,483 + +1.2
1,340,491 - +0.4
1,340,581 + +0.6
1,340,610 - +1.6
1,340,618 + +2.5
1,340,702 + -0.0
1,340,704 - -0.1
1,340,716 - MPMX20_01277 0.11 -1.1
1,340,802 + MPMX20_01277 0.21 -1.1
1,340,802 + MPMX20_01277 0.21 -0.0
1,340,821 + MPMX20_01277 0.24 -0.4
1,340,821 + MPMX20_01277 0.24 -0.5
1,340,821 + MPMX20_01277 0.24 -0.4
1,340,829 - MPMX20_01277 0.25 +1.2
1,340,829 - MPMX20_01277 0.25 -0.1
1,340,829 - MPMX20_01277 0.25 +0.4
1,340,829 - MPMX20_01277 0.25 +0.2
1,340,829 - MPMX20_01277 0.25 -2.1
1,340,829 - MPMX20_01277 0.25 +1.3
1,340,829 - MPMX20_01277 0.25 -1.1
1,340,844 - MPMX20_01277 0.26 -1.1
1,340,846 - MPMX20_01277 0.27 +0.6
1,340,861 - MPMX20_01277 0.29 +0.5
1,340,983 + MPMX20_01277 0.43 -0.5
1,341,060 - MPMX20_01277 0.52 +0.6
1,341,070 - MPMX20_01277 0.54 +0.0
1,341,092 + MPMX20_01277 0.56 +0.6
1,341,092 + MPMX20_01277 0.56 -2.5
1,341,100 - MPMX20_01277 0.57 +0.1
1,341,141 + MPMX20_01277 0.62 -1.7
1,341,159 - MPMX20_01277 0.64 +0.9
1,341,161 + MPMX20_01277 0.65 +1.2
1,341,169 - MPMX20_01277 0.66 +1.2
1,341,187 - MPMX20_01277 0.68 +1.2
1,341,209 + MPMX20_01277 0.70 +0.3
1,341,209 + MPMX20_01277 0.70 -1.2
1,341,209 + MPMX20_01277 0.70 -0.4
1,341,209 + MPMX20_01277 0.70 +1.2
1,341,209 + MPMX20_01277 0.70 -0.4
1,341,209 + MPMX20_01277 0.70 +1.3
1,341,209 + MPMX20_01277 0.70 -1.4
1,341,211 + MPMX20_01277 0.71 +0.2
1,341,217 - MPMX20_01277 0.71 -0.4
1,341,217 - MPMX20_01277 0.71 -2.4
1,341,217 - MPMX20_01277 0.71 +0.1
1,341,219 - MPMX20_01277 0.72 -0.5
1,341,329 + MPMX20_01277 0.85 -0.8
1,341,334 + MPMX20_01277 0.85 -0.5
1,341,357 + MPMX20_01277 0.88 +0.8
1,341,367 + MPMX20_01277 0.89 +0.9

Or see this region's nucleotide sequence