Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02775

Experiment: 1X LB plate, 1:1 coculture with Chryseobacterium gleum TBS_021

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02773 and MPMX20_02774 are separated by 51 nucleotidesMPMX20_02774 and MPMX20_02775 are separated by 40 nucleotidesMPMX20_02775 and MPMX20_02776 overlap by 4 nucleotides MPMX20_02773: MPMX20_02773 - hypothetical protein, at 2,927,781 to 2,928,599 _02773 MPMX20_02774: MPMX20_02774 - Inner membrane protein YecN, at 2,928,651 to 2,929,046 _02774 MPMX20_02775: MPMX20_02775 - Carboxy-S-adenosyl-L-methionine synthase, at 2,929,087 to 2,929,830 _02775 MPMX20_02776: MPMX20_02776 - tRNA U34 carboxymethyltransferase, at 2,929,827 to 2,930,798 _02776 Position (kb) 2929 2930Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2928.094 kb on + strand, within MPMX20_02773at 2928.094 kb on + strand, within MPMX20_02773at 2928.094 kb on + strand, within MPMX20_02773at 2928.094 kb on + strand, within MPMX20_02773at 2928.094 kb on + strand, within MPMX20_02773at 2928.094 kb on + strand, within MPMX20_02773at 2928.094 kb on + strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.102 kb on - strand, within MPMX20_02773at 2928.163 kb on + strand, within MPMX20_02773at 2928.171 kb on - strand, within MPMX20_02773at 2928.178 kb on - strand, within MPMX20_02773at 2928.213 kb on + strand, within MPMX20_02773at 2928.213 kb on + strand, within MPMX20_02773at 2928.221 kb on - strand, within MPMX20_02773at 2928.241 kb on + strand, within MPMX20_02773at 2928.270 kb on + strand, within MPMX20_02773at 2928.278 kb on - strand, within MPMX20_02773at 2928.326 kb on + strand, within MPMX20_02773at 2928.465 kb on - strand, within MPMX20_02773at 2928.502 kb on + strand, within MPMX20_02773at 2928.502 kb on + strand, within MPMX20_02773at 2928.510 kb on - strand, within MPMX20_02773at 2928.510 kb on - strand, within MPMX20_02773at 2928.510 kb on - strand, within MPMX20_02773at 2928.510 kb on - strand, within MPMX20_02773at 2928.582 kb on - strandat 2928.605 kb on + strandat 2928.656 kb on - strandat 2928.679 kb on + strandat 2928.729 kb on - strand, within MPMX20_02774at 2928.791 kb on + strand, within MPMX20_02774at 2928.801 kb on + strand, within MPMX20_02774at 2928.809 kb on - strand, within MPMX20_02774at 2928.809 kb on - strand, within MPMX20_02774at 2928.812 kb on - strand, within MPMX20_02774at 2928.860 kb on + strand, within MPMX20_02774at 2928.860 kb on + strand, within MPMX20_02774at 2928.870 kb on + strand, within MPMX20_02774at 2928.877 kb on + strand, within MPMX20_02774at 2928.878 kb on - strand, within MPMX20_02774at 2928.885 kb on - strand, within MPMX20_02774at 2928.885 kb on - strand, within MPMX20_02774at 2928.937 kb on - strand, within MPMX20_02774at 2929.004 kb on + strand, within MPMX20_02774at 2929.012 kb on - strandat 2929.012 kb on - strandat 2929.046 kb on + strandat 2929.121 kb on + strandat 2929.135 kb on - strandat 2929.192 kb on + strand, within MPMX20_02775at 2929.233 kb on + strand, within MPMX20_02775at 2929.270 kb on + strand, within MPMX20_02775at 2929.270 kb on + strand, within MPMX20_02775at 2929.356 kb on - strand, within MPMX20_02775at 2929.504 kb on + strand, within MPMX20_02775at 2929.512 kb on - strand, within MPMX20_02775at 2929.512 kb on - strand, within MPMX20_02775at 2929.743 kb on - strand, within MPMX20_02775at 2929.748 kb on - strand, within MPMX20_02775at 2929.754 kb on - strand, within MPMX20_02775at 2929.759 kb on - strandat 2929.804 kb on - strandat 2929.814 kb on - strandat 2929.907 kb on - strandat 2929.993 kb on + strand, within MPMX20_02776at 2929.993 kb on + strand, within MPMX20_02776at 2929.993 kb on + strand, within MPMX20_02776at 2930.011 kb on - strand, within MPMX20_02776at 2930.034 kb on - strand, within MPMX20_02776at 2930.093 kb on + strand, within MPMX20_02776at 2930.134 kb on - strand, within MPMX20_02776at 2930.156 kb on - strand, within MPMX20_02776at 2930.187 kb on - strand, within MPMX20_02776at 2930.187 kb on - strand, within MPMX20_02776at 2930.206 kb on - strand, within MPMX20_02776at 2930.276 kb on + strand, within MPMX20_02776at 2930.284 kb on - strand, within MPMX20_02776at 2930.296 kb on + strand, within MPMX20_02776at 2930.314 kb on - strand, within MPMX20_02776at 2930.332 kb on + strand, within MPMX20_02776at 2930.354 kb on + strand, within MPMX20_02776at 2930.373 kb on - strand, within MPMX20_02776at 2930.653 kb on + strand, within MPMX20_02776at 2930.673 kb on - strand, within MPMX20_02776at 2930.683 kb on - strand, within MPMX20_02776at 2930.745 kb on + strandat 2930.745 kb on + strandat 2930.753 kb on - strandat 2930.775 kb on + strandat 2930.783 kb on - strandat 2930.815 kb on + strandat 2930.815 kb on + strandat 2930.823 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Chryseobacterium gleum TBS_021
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2,928,094 + MPMX20_02773 0.38 -1.0
2,928,094 + MPMX20_02773 0.38 -0.5
2,928,094 + MPMX20_02773 0.38 +0.7
2,928,094 + MPMX20_02773 0.38 -0.0
2,928,094 + MPMX20_02773 0.38 +0.4
2,928,094 + MPMX20_02773 0.38 -1.8
2,928,094 + MPMX20_02773 0.38 +1.4
2,928,102 - MPMX20_02773 0.39 -0.8
2,928,102 - MPMX20_02773 0.39 -1.3
2,928,102 - MPMX20_02773 0.39 +0.2
2,928,102 - MPMX20_02773 0.39 -0.1
2,928,102 - MPMX20_02773 0.39 +0.3
2,928,102 - MPMX20_02773 0.39 -0.4
2,928,102 - MPMX20_02773 0.39 +0.1
2,928,102 - MPMX20_02773 0.39 -0.4
2,928,102 - MPMX20_02773 0.39 +1.0
2,928,102 - MPMX20_02773 0.39 +0.8
2,928,102 - MPMX20_02773 0.39 +0.6
2,928,102 - MPMX20_02773 0.39 -0.1
2,928,163 + MPMX20_02773 0.47 -0.8
2,928,171 - MPMX20_02773 0.48 -0.3
2,928,178 - MPMX20_02773 0.48 -0.6
2,928,213 + MPMX20_02773 0.53 +1.0
2,928,213 + MPMX20_02773 0.53 +1.8
2,928,221 - MPMX20_02773 0.54 -0.3
2,928,241 + MPMX20_02773 0.56 -0.7
2,928,270 + MPMX20_02773 0.60 +0.3
2,928,278 - MPMX20_02773 0.61 -1.0
2,928,326 + MPMX20_02773 0.67 -0.1
2,928,465 - MPMX20_02773 0.84 +1.0
2,928,502 + MPMX20_02773 0.88 -0.3
2,928,502 + MPMX20_02773 0.88 -0.9
2,928,510 - MPMX20_02773 0.89 -1.0
2,928,510 - MPMX20_02773 0.89 -0.6
2,928,510 - MPMX20_02773 0.89 -1.0
2,928,510 - MPMX20_02773 0.89 +0.5
2,928,582 - -1.7
2,928,605 + +0.9
2,928,656 - +1.1
2,928,679 + +0.4
2,928,729 - MPMX20_02774 0.20 -1.5
2,928,791 + MPMX20_02774 0.35 -1.1
2,928,801 + MPMX20_02774 0.38 -0.8
2,928,809 - MPMX20_02774 0.40 -1.1
2,928,809 - MPMX20_02774 0.40 -1.8
2,928,812 - MPMX20_02774 0.41 -0.7
2,928,860 + MPMX20_02774 0.53 -1.0
2,928,860 + MPMX20_02774 0.53 -0.2
2,928,870 + MPMX20_02774 0.55 -1.0
2,928,877 + MPMX20_02774 0.57 -1.0
2,928,878 - MPMX20_02774 0.57 -0.1
2,928,885 - MPMX20_02774 0.59 -0.7
2,928,885 - MPMX20_02774 0.59 -0.6
2,928,937 - MPMX20_02774 0.72 +1.8
2,929,004 + MPMX20_02774 0.89 +1.4
2,929,012 - +0.4
2,929,012 - -0.3
2,929,046 + +0.4
2,929,121 + -0.1
2,929,135 - -0.8
2,929,192 + MPMX20_02775 0.14 -0.6
2,929,233 + MPMX20_02775 0.20 -0.3
2,929,270 + MPMX20_02775 0.25 -1.5
2,929,270 + MPMX20_02775 0.25 -1.2
2,929,356 - MPMX20_02775 0.36 -1.1
2,929,504 + MPMX20_02775 0.56 -2.0
2,929,512 - MPMX20_02775 0.57 -0.2
2,929,512 - MPMX20_02775 0.57 -2.1
2,929,743 - MPMX20_02775 0.88 -1.9
2,929,748 - MPMX20_02775 0.89 -0.9
2,929,754 - MPMX20_02775 0.90 -0.2
2,929,759 - -1.9
2,929,804 - -0.9
2,929,814 - -0.4
2,929,907 - -0.9
2,929,993 + MPMX20_02776 0.17 -2.1
2,929,993 + MPMX20_02776 0.17 -1.7
2,929,993 + MPMX20_02776 0.17 +0.2
2,930,011 - MPMX20_02776 0.19 -1.4
2,930,034 - MPMX20_02776 0.21 +0.8
2,930,093 + MPMX20_02776 0.27 -0.3
2,930,134 - MPMX20_02776 0.32 -1.1
2,930,156 - MPMX20_02776 0.34 +0.6
2,930,187 - MPMX20_02776 0.37 -2.3
2,930,187 - MPMX20_02776 0.37 -0.5
2,930,206 - MPMX20_02776 0.39 -1.2
2,930,276 + MPMX20_02776 0.46 -0.5
2,930,284 - MPMX20_02776 0.47 -2.6
2,930,296 + MPMX20_02776 0.48 -0.4
2,930,314 - MPMX20_02776 0.50 +0.1
2,930,332 + MPMX20_02776 0.52 -2.9
2,930,354 + MPMX20_02776 0.54 -1.5
2,930,373 - MPMX20_02776 0.56 -1.5
2,930,653 + MPMX20_02776 0.85 +1.2
2,930,673 - MPMX20_02776 0.87 +0.6
2,930,683 - MPMX20_02776 0.88 -1.3
2,930,745 + -1.7
2,930,745 + -1.1
2,930,753 - -1.3
2,930,775 + -0.1
2,930,783 - +0.4
2,930,815 + -0.1
2,930,815 + -0.1
2,930,823 - -0.7

Or see this region's nucleotide sequence