Experiment: 1X LB plate, 1:1 coculture with Chryseobacterium gleum TBS_021
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02102 and MPMX20_02103 are separated by 631 nucleotides MPMX20_02103 and MPMX20_02104 are separated by 184 nucleotides
MPMX20_02102: MPMX20_02102 - hypothetical protein, at 2,196,594 to 2,198,408
_02102
MPMX20_02103: MPMX20_02103 - hypothetical protein, at 2,199,040 to 2,199,216
_02103
MPMX20_02104: MPMX20_02104 - hypothetical protein, at 2,199,401 to 2,199,811
_02104
Position (kb)
2196
2197
2198
2199 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 2196.679 kb on + strand at 2197.119 kb on + strand, within MPMX20_02102 at 2197.878 kb on + strand, within MPMX20_02102 at 2198.624 kb on - strand at 2198.624 kb on - strand at 2198.801 kb on - strand at 2198.814 kb on - strand at 2198.846 kb on - strand at 2198.846 kb on - strand at 2198.858 kb on - strand at 2198.877 kb on - strand at 2198.877 kb on - strand at 2198.877 kb on - strand at 2198.877 kb on - strand at 2198.877 kb on - strand at 2198.882 kb on - strand at 2198.882 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.887 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.892 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.897 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.902 kb on - strand at 2198.907 kb on - strand at 2198.911 kb on - strand at 2198.919 kb on - strand at 2198.919 kb on - strand at 2198.919 kb on - strand at 2198.919 kb on - strand at 2198.919 kb on - strand at 2198.919 kb on - strand at 2198.919 kb on - strand at 2198.924 kb on - strand at 2198.927 kb on + strand at 2198.935 kb on - strand at 2198.935 kb on - strand at 2198.935 kb on - strand at 2198.935 kb on - strand at 2198.935 kb on - strand at 2198.935 kb on - strand at 2198.935 kb on - strand at 2198.935 kb on - strand at 2198.935 kb on - strand at 2198.946 kb on + strand at 2198.954 kb on - strand at 2198.954 kb on - strand at 2198.954 kb on - strand at 2199.011 kb on - strand at 2199.023 kb on - strand at 2199.028 kb on - strand at 2199.046 kb on - strand at 2199.064 kb on - strand, within MPMX20_02103 at 2199.065 kb on - strand, within MPMX20_02103 at 2199.071 kb on + strand, within MPMX20_02103 at 2199.071 kb on - strand, within MPMX20_02103 at 2199.071 kb on - strand, within MPMX20_02103 at 2199.075 kb on - strand, within MPMX20_02103 at 2199.076 kb on + strand, within MPMX20_02103 at 2199.079 kb on - strand, within MPMX20_02103 at 2199.089 kb on - strand, within MPMX20_02103 at 2199.089 kb on - strand, within MPMX20_02103 at 2199.096 kb on - strand, within MPMX20_02103 at 2199.114 kb on - strand, within MPMX20_02103 at 2199.118 kb on + strand, within MPMX20_02103 at 2199.121 kb on - strand, within MPMX20_02103 at 2199.132 kb on + strand, within MPMX20_02103 at 2199.135 kb on - strand, within MPMX20_02103 at 2199.137 kb on - strand, within MPMX20_02103 at 2199.142 kb on - strand, within MPMX20_02103 at 2199.190 kb on + strand, within MPMX20_02103 at 2199.193 kb on - strand, within MPMX20_02103 at 2199.196 kb on + strand, within MPMX20_02103 at 2199.196 kb on + strand, within MPMX20_02103 at 2199.201 kb on + strand at 2199.204 kb on - strand at 2199.204 kb on - strand at 2199.206 kb on + strand at 2199.214 kb on - strand at 2199.318 kb on + strand at 2199.318 kb on + strand at 2199.321 kb on - strand at 2199.326 kb on - strand at 2199.326 kb on - strand at 2199.326 kb on - strand at 2199.326 kb on - strand at 2199.335 kb on + strand at 2199.352 kb on + strand at 2199.352 kb on + strand at 2199.360 kb on - strand at 2199.360 kb on - strand at 2199.362 kb on - strand at 2199.399 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 1X LB plate, 1:1 coculture with Chryseobacterium gleum TBS_021 remove 2,196,679 + +0.5 2,197,119 + MPMX20_02102 0.29 -1.8 2,197,878 + MPMX20_02102 0.71 -2.9 2,198,624 - +1.3 2,198,624 - +0.3 2,198,801 - +0.6 2,198,814 - -0.9 2,198,846 - +0.2 2,198,846 - +0.6 2,198,858 - -0.6 2,198,877 - +0.3 2,198,877 - +0.7 2,198,877 - -0.2 2,198,877 - -0.7 2,198,877 - +0.3 2,198,882 - +2.3 2,198,882 - -0.4 2,198,887 - -0.4 2,198,887 - +0.2 2,198,887 - +0.2 2,198,887 - -1.8 2,198,887 - -0.3 2,198,887 - +1.1 2,198,887 - +5.3 2,198,887 - +0.3 2,198,887 - -0.1 2,198,887 - -0.4 2,198,887 - -1.8 2,198,887 - -1.2 2,198,887 - +1.5 2,198,887 - +4.6 2,198,887 - -0.2 2,198,887 - -1.8 2,198,887 - -0.3 2,198,887 - -1.8 2,198,887 - -0.1 2,198,887 - -1.8 2,198,887 - -0.4 2,198,887 - -0.8 2,198,887 - +1.0 2,198,887 - +0.5 2,198,887 - -1.0 2,198,887 - +1.2 2,198,887 - +2.3 2,198,887 - -1.0 2,198,892 - -0.6 2,198,892 - -1.9 2,198,892 - +0.2 2,198,892 - -1.1 2,198,892 - +0.7 2,198,892 - -0.4 2,198,892 - +0.1 2,198,892 - -0.1 2,198,892 - +0.0 2,198,892 - -0.4 2,198,892 - -1.1 2,198,892 - -0.0 2,198,892 - +0.5 2,198,892 - +0.1 2,198,892 - -1.0 2,198,892 - +0.3 2,198,892 - +1.2 2,198,892 - +0.0 2,198,892 - -0.4 2,198,892 - +2.3 2,198,892 - +1.0 2,198,892 - +0.3 2,198,892 - +0.5 2,198,892 - -0.9 2,198,892 - -0.3 2,198,892 - +0.2 2,198,892 - +0.4 2,198,892 - -1.3 2,198,892 - -0.7 2,198,892 - -2.0 2,198,892 - +0.5 2,198,892 - +0.1 2,198,892 - -0.8 2,198,892 - -1.9 2,198,892 - -1.3 2,198,892 - +0.2 2,198,892 - -0.9 2,198,892 - -0.1 2,198,892 - -1.7 2,198,892 - -0.5 2,198,892 - +1.6 2,198,892 - -1.3 2,198,892 - -0.5 2,198,892 - +0.0 2,198,892 - +0.3 2,198,892 - +0.0 2,198,892 - +1.3 2,198,892 - -1.1 2,198,892 - +0.3 2,198,892 - -1.3 2,198,892 - -0.3 2,198,892 - +0.7 2,198,892 - +0.3 2,198,892 - +0.2 2,198,897 - +1.1 2,198,897 - +0.1 2,198,897 - -1.3 2,198,897 - -1.4 2,198,897 - +0.7 2,198,897 - -1.1 2,198,897 - -0.1 2,198,897 - +0.3 2,198,897 - +0.7 2,198,897 - +0.2 2,198,897 - +0.9 2,198,897 - +0.7 2,198,897 - +0.4 2,198,897 - -0.8 2,198,897 - -1.9 2,198,897 - +1.6 2,198,897 - +1.3 2,198,897 - -0.1 2,198,897 - -1.1 2,198,897 - -0.0 2,198,897 - +0.3 2,198,897 - -0.8 2,198,897 - -1.3 2,198,897 - -0.3 2,198,897 - +0.2 2,198,897 - +1.3 2,198,897 - -0.1 2,198,897 - +1.9 2,198,897 - -0.2 2,198,897 - -1.1 2,198,897 - +0.7 2,198,897 - -1.5 2,198,897 - +1.5 2,198,897 - -0.6 2,198,897 - +1.7 2,198,897 - +1.0 2,198,897 - +0.0 2,198,897 - -0.1 2,198,897 - -1.1 2,198,897 - +0.1 2,198,897 - +0.7 2,198,897 - -0.7 2,198,897 - -1.3 2,198,897 - -0.5 2,198,897 - +1.1 2,198,897 - +0.7 2,198,897 - -0.4 2,198,897 - +1.3 2,198,897 - -0.3 2,198,897 - -1.3 2,198,897 - +0.9 2,198,897 - -0.7 2,198,897 - +0.5 2,198,897 - -0.4 2,198,897 - +0.7 2,198,897 - -1.4 2,198,897 - +0.3 2,198,897 - +1.0 2,198,897 - -0.8 2,198,897 - +0.0 2,198,897 - -0.7 2,198,897 - -0.4 2,198,897 - -1.4 2,198,897 - +0.9 2,198,897 - +1.1 2,198,897 - -0.6 2,198,897 - -0.5 2,198,897 - -2.3 2,198,897 - +0.5 2,198,897 - -1.0 2,198,897 - -0.6 2,198,897 - -1.4 2,198,897 - -0.0 2,198,897 - -0.9 2,198,897 - +1.6 2,198,897 - -1.1 2,198,897 - +0.2 2,198,897 - +0.7 2,198,897 - +1.7 2,198,897 - -0.4 2,198,897 - -2.2 2,198,897 - -0.7 2,198,897 - +0.7 2,198,897 - -1.3 2,198,897 - -0.4 2,198,897 - -1.3 2,198,897 - +0.0 2,198,897 - +1.7 2,198,897 - +2.2 2,198,897 - -0.3 2,198,897 - -1.0 2,198,897 - -0.9 2,198,897 - -1.1 2,198,902 - +0.7 2,198,902 - +0.9 2,198,902 - +0.9 2,198,902 - -0.8 2,198,902 - +1.2 2,198,902 - +0.2 2,198,902 - -0.5 2,198,902 - +0.7 2,198,902 - -0.9 2,198,902 - -0.5 2,198,902 - +0.6 2,198,902 - -0.5 2,198,902 - -2.1 2,198,902 - -0.3 2,198,902 - +0.6 2,198,902 - -0.1 2,198,902 - -0.3 2,198,902 - -1.1 2,198,902 - -0.5 2,198,902 - -0.9 2,198,902 - +0.2 2,198,902 - +0.3 2,198,902 - -0.3 2,198,902 - -1.4 2,198,902 - -0.1 2,198,902 - -0.4 2,198,902 - -1.1 2,198,902 - -1.2 2,198,902 - -0.3 2,198,902 - -2.9 2,198,902 - -2.2 2,198,902 - -0.8 2,198,902 - -0.2 2,198,902 - +1.1 2,198,902 - +0.0 2,198,902 - -0.3 2,198,902 - -0.2 2,198,907 - -1.8 2,198,911 - -2.1 2,198,919 - -0.4 2,198,919 - -1.1 2,198,919 - +0.2 2,198,919 - -0.7 2,198,919 - +2.3 2,198,919 - -1.1 2,198,919 - +0.3 2,198,924 - +0.3 2,198,927 + -1.0 2,198,935 - +0.0 2,198,935 - +0.9 2,198,935 - +0.0 2,198,935 - +0.9 2,198,935 - -1.0 2,198,935 - -0.4 2,198,935 - -0.4 2,198,935 - +0.2 2,198,935 - +0.0 2,198,946 + +0.3 2,198,954 - +0.0 2,198,954 - +0.7 2,198,954 - -0.5 2,199,011 - +1.6 2,199,023 - -0.5 2,199,028 - -0.7 2,199,046 - -0.1 2,199,064 - MPMX20_02103 0.14 -1.0 2,199,065 - MPMX20_02103 0.14 -1.5 2,199,071 + MPMX20_02103 0.18 +0.7 2,199,071 - MPMX20_02103 0.18 +0.3 2,199,071 - MPMX20_02103 0.18 +0.1 2,199,075 - MPMX20_02103 0.20 +0.2 2,199,076 + MPMX20_02103 0.20 +0.7 2,199,079 - MPMX20_02103 0.22 +0.9 2,199,089 - MPMX20_02103 0.28 +0.7 2,199,089 - MPMX20_02103 0.28 -1.0 2,199,096 - MPMX20_02103 0.32 +1.3 2,199,114 - MPMX20_02103 0.42 +0.2 2,199,118 + MPMX20_02103 0.44 +1.9 2,199,121 - MPMX20_02103 0.46 +1.6 2,199,132 + MPMX20_02103 0.52 +0.0 2,199,135 - MPMX20_02103 0.54 +0.5 2,199,137 - MPMX20_02103 0.55 +0.7 2,199,142 - MPMX20_02103 0.58 -0.1 2,199,190 + MPMX20_02103 0.85 -0.8 2,199,193 - MPMX20_02103 0.86 -0.7 2,199,196 + MPMX20_02103 0.88 -0.1 2,199,196 + MPMX20_02103 0.88 -0.6 2,199,201 + +1.5 2,199,204 - -0.4 2,199,204 - +0.0 2,199,206 + +2.3 2,199,214 - +0.7 2,199,318 + +0.3 2,199,318 + +1.5 2,199,321 - -1.2 2,199,326 - -0.8 2,199,326 - -0.5 2,199,326 - -0.6 2,199,326 - -0.8 2,199,335 + -0.3 2,199,352 + +0.9 2,199,352 + -0.5 2,199,360 - -0.2 2,199,360 - +0.4 2,199,362 - -0.5 2,199,399 - +0.7
Or see this region's nucleotide sequence