Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03961

Experiment: M9 plate, 1:1 coculture with Chryseobacterium proteolyticum TBS_027

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03960 and MPMX20_03961 are separated by 11 nucleotidesMPMX20_03961 and MPMX20_03962 overlap by 8 nucleotidesMPMX20_03962 and MPMX20_03963 are separated by 5 nucleotides MPMX20_03960: MPMX20_03960 - hypothetical protein, at 4,159,689 to 4,161,872 _03960 MPMX20_03961: MPMX20_03961 - hypothetical protein, at 4,161,884 to 4,162,414 _03961 MPMX20_03962: MPMX20_03962 - hypothetical protein, at 4,162,407 to 4,163,315 _03962 MPMX20_03963: MPMX20_03963 - hypothetical protein, at 4,163,321 to 4,163,671 _03963 Position (kb) 4161 4162 4163Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7 8 9at 4160.889 kb on - strand, within MPMX20_03960at 4160.892 kb on + strand, within MPMX20_03960at 4160.920 kb on - strand, within MPMX20_03960at 4160.920 kb on - strand, within MPMX20_03960at 4160.920 kb on - strand, within MPMX20_03960at 4160.925 kb on - strand, within MPMX20_03960at 4160.930 kb on - strand, within MPMX20_03960at 4160.935 kb on + strand, within MPMX20_03960at 4160.942 kb on + strand, within MPMX20_03960at 4160.943 kb on - strand, within MPMX20_03960at 4160.943 kb on - strand, within MPMX20_03960at 4160.950 kb on - strand, within MPMX20_03960at 4160.983 kb on + strand, within MPMX20_03960at 4160.991 kb on - strand, within MPMX20_03960at 4161.003 kb on + strand, within MPMX20_03960at 4161.011 kb on - strand, within MPMX20_03960at 4161.011 kb on - strand, within MPMX20_03960at 4161.030 kb on - strand, within MPMX20_03960at 4161.069 kb on + strand, within MPMX20_03960at 4161.069 kb on + strand, within MPMX20_03960at 4161.072 kb on - strand, within MPMX20_03960at 4161.075 kb on - strand, within MPMX20_03960at 4161.080 kb on - strand, within MPMX20_03960at 4161.134 kb on + strand, within MPMX20_03960at 4161.134 kb on + strand, within MPMX20_03960at 4161.134 kb on + strand, within MPMX20_03960at 4161.137 kb on - strand, within MPMX20_03960at 4161.137 kb on - strand, within MPMX20_03960at 4161.142 kb on - strand, within MPMX20_03960at 4161.142 kb on - strand, within MPMX20_03960at 4161.142 kb on - strand, within MPMX20_03960at 4161.154 kb on + strand, within MPMX20_03960at 4161.155 kb on + strand, within MPMX20_03960at 4161.162 kb on - strand, within MPMX20_03960at 4161.184 kb on - strand, within MPMX20_03960at 4161.184 kb on - strand, within MPMX20_03960at 4161.199 kb on + strand, within MPMX20_03960at 4161.199 kb on + strand, within MPMX20_03960at 4161.207 kb on - strand, within MPMX20_03960at 4161.214 kb on + strand, within MPMX20_03960at 4161.237 kb on + strand, within MPMX20_03960at 4161.237 kb on + strand, within MPMX20_03960at 4161.266 kb on + strand, within MPMX20_03960at 4161.266 kb on + strand, within MPMX20_03960at 4161.274 kb on - strand, within MPMX20_03960at 4161.274 kb on - strand, within MPMX20_03960at 4161.274 kb on - strand, within MPMX20_03960at 4161.331 kb on + strand, within MPMX20_03960at 4161.331 kb on + strand, within MPMX20_03960at 4161.331 kb on + strand, within MPMX20_03960at 4161.331 kb on + strand, within MPMX20_03960at 4161.331 kb on + strand, within MPMX20_03960at 4161.339 kb on - strand, within MPMX20_03960at 4161.339 kb on - strand, within MPMX20_03960at 4161.339 kb on - strand, within MPMX20_03960at 4161.339 kb on - strand, within MPMX20_03960at 4161.339 kb on - strand, within MPMX20_03960at 4161.339 kb on - strand, within MPMX20_03960at 4161.341 kb on + strand, within MPMX20_03960at 4161.379 kb on + strand, within MPMX20_03960at 4161.379 kb on + strand, within MPMX20_03960at 4161.387 kb on - strand, within MPMX20_03960at 4161.387 kb on - strand, within MPMX20_03960at 4161.389 kb on + strand, within MPMX20_03960at 4161.415 kb on + strand, within MPMX20_03960at 4161.423 kb on - strand, within MPMX20_03960at 4161.423 kb on - strand, within MPMX20_03960at 4161.437 kb on + strand, within MPMX20_03960at 4161.445 kb on - strand, within MPMX20_03960at 4161.445 kb on - strand, within MPMX20_03960at 4161.502 kb on - strand, within MPMX20_03960at 4161.511 kb on + strand, within MPMX20_03960at 4161.513 kb on + strand, within MPMX20_03960at 4161.530 kb on + strand, within MPMX20_03960at 4161.535 kb on + strand, within MPMX20_03960at 4161.538 kb on - strand, within MPMX20_03960at 4161.631 kb on + strand, within MPMX20_03960at 4161.631 kb on + strand, within MPMX20_03960at 4161.633 kb on + strand, within MPMX20_03960at 4161.639 kb on - strand, within MPMX20_03960at 4161.639 kb on - strand, within MPMX20_03960at 4161.639 kb on - strand, within MPMX20_03960at 4161.700 kb on + strandat 4161.700 kb on + strandat 4161.700 kb on + strandat 4161.700 kb on + strandat 4161.700 kb on + strandat 4161.700 kb on + strandat 4161.708 kb on - strandat 4161.708 kb on - strandat 4161.708 kb on - strandat 4161.708 kb on - strandat 4161.708 kb on - strandat 4161.708 kb on - strandat 4161.742 kb on - strandat 4161.868 kb on + strandat 4161.874 kb on - strandat 4161.881 kb on + strandat 4161.881 kb on + strandat 4161.881 kb on + strandat 4161.920 kb on + strandat 4161.920 kb on + strandat 4161.921 kb on - strandat 4161.928 kb on - strandat 4161.933 kb on - strandat 4162.005 kb on + strand, within MPMX20_03961at 4162.005 kb on + strand, within MPMX20_03961at 4162.013 kb on - strand, within MPMX20_03961at 4162.013 kb on - strand, within MPMX20_03961at 4162.060 kb on + strand, within MPMX20_03961at 4162.062 kb on + strand, within MPMX20_03961at 4162.070 kb on - strand, within MPMX20_03961at 4162.072 kb on + strand, within MPMX20_03961at 4162.153 kb on + strand, within MPMX20_03961at 4162.161 kb on - strand, within MPMX20_03961at 4162.161 kb on - strand, within MPMX20_03961at 4162.171 kb on - strand, within MPMX20_03961at 4162.232 kb on + strand, within MPMX20_03961at 4162.232 kb on + strand, within MPMX20_03961at 4162.240 kb on - strand, within MPMX20_03961at 4162.240 kb on - strand, within MPMX20_03961at 4162.240 kb on - strand, within MPMX20_03961at 4162.275 kb on - strand, within MPMX20_03961at 4162.303 kb on - strand, within MPMX20_03961at 4162.329 kb on + strand, within MPMX20_03961at 4162.332 kb on - strand, within MPMX20_03961at 4162.368 kb on + strandat 4162.421 kb on + strandat 4162.432 kb on + strandat 4162.435 kb on - strandat 4162.435 kb on - strandat 4162.437 kb on + strandat 4162.437 kb on + strandat 4162.437 kb on + strandat 4162.437 kb on + strandat 4162.445 kb on - strandat 4162.445 kb on - strandat 4162.463 kb on - strandat 4162.464 kb on - strandat 4162.472 kb on + strandat 4162.480 kb on - strandat 4162.507 kb on - strand, within MPMX20_03962at 4162.511 kb on + strand, within MPMX20_03962at 4162.532 kb on - strand, within MPMX20_03962at 4162.567 kb on + strand, within MPMX20_03962at 4162.572 kb on + strand, within MPMX20_03962at 4162.574 kb on + strand, within MPMX20_03962at 4162.575 kb on - strand, within MPMX20_03962at 4162.585 kb on + strand, within MPMX20_03962at 4162.593 kb on - strand, within MPMX20_03962at 4162.593 kb on - strand, within MPMX20_03962at 4162.593 kb on - strand, within MPMX20_03962at 4162.617 kb on + strand, within MPMX20_03962at 4162.619 kb on + strand, within MPMX20_03962at 4162.692 kb on - strand, within MPMX20_03962at 4162.717 kb on + strand, within MPMX20_03962at 4162.717 kb on + strand, within MPMX20_03962at 4162.717 kb on + strand, within MPMX20_03962at 4162.755 kb on + strand, within MPMX20_03962at 4162.774 kb on - strand, within MPMX20_03962at 4162.774 kb on - strand, within MPMX20_03962at 4162.794 kb on + strand, within MPMX20_03962at 4162.814 kb on + strand, within MPMX20_03962at 4162.823 kb on + strand, within MPMX20_03962at 4162.842 kb on + strand, within MPMX20_03962at 4163.008 kb on + strand, within MPMX20_03962at 4163.013 kb on - strand, within MPMX20_03962at 4163.023 kb on + strand, within MPMX20_03962at 4163.025 kb on + strand, within MPMX20_03962at 4163.025 kb on + strand, within MPMX20_03962at 4163.035 kb on + strand, within MPMX20_03962at 4163.035 kb on + strand, within MPMX20_03962at 4163.043 kb on - strand, within MPMX20_03962at 4163.043 kb on - strand, within MPMX20_03962at 4163.043 kb on - strand, within MPMX20_03962at 4163.043 kb on - strand, within MPMX20_03962at 4163.043 kb on - strand, within MPMX20_03962at 4163.043 kb on - strand, within MPMX20_03962at 4163.045 kb on + strand, within MPMX20_03962at 4163.073 kb on - strand, within MPMX20_03962at 4163.134 kb on + strand, within MPMX20_03962at 4163.167 kb on - strand, within MPMX20_03962at 4163.167 kb on - strand, within MPMX20_03962at 4163.171 kb on + strand, within MPMX20_03962at 4163.196 kb on - strand, within MPMX20_03962at 4163.204 kb on + strand, within MPMX20_03962at 4163.209 kb on + strand, within MPMX20_03962at 4163.209 kb on + strand, within MPMX20_03962at 4163.219 kb on + strand, within MPMX20_03962at 4163.317 kb on + strandat 4163.353 kb on + strandat 4163.388 kb on - strand, within MPMX20_03963at 4163.388 kb on - strand, within MPMX20_03963

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Chryseobacterium proteolyticum TBS_027
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4,160,889 - MPMX20_03960 0.55 -1.1
4,160,892 + MPMX20_03960 0.55 +0.0
4,160,920 - MPMX20_03960 0.56 -0.5
4,160,920 - MPMX20_03960 0.56 +0.2
4,160,920 - MPMX20_03960 0.56 -1.0
4,160,925 - MPMX20_03960 0.57 +0.6
4,160,930 - MPMX20_03960 0.57 +0.7
4,160,935 + MPMX20_03960 0.57 -0.7
4,160,942 + MPMX20_03960 0.57 +0.7
4,160,943 - MPMX20_03960 0.57 +3.0
4,160,943 - MPMX20_03960 0.57 +0.5
4,160,950 - MPMX20_03960 0.58 -0.9
4,160,983 + MPMX20_03960 0.59 -0.3
4,160,991 - MPMX20_03960 0.60 -0.1
4,161,003 + MPMX20_03960 0.60 -0.3
4,161,011 - MPMX20_03960 0.61 +0.2
4,161,011 - MPMX20_03960 0.61 -0.3
4,161,030 - MPMX20_03960 0.61 -0.6
4,161,069 + MPMX20_03960 0.63 -1.0
4,161,069 + MPMX20_03960 0.63 -1.6
4,161,072 - MPMX20_03960 0.63 -0.2
4,161,075 - MPMX20_03960 0.63 -1.3
4,161,080 - MPMX20_03960 0.64 -1.4
4,161,134 + MPMX20_03960 0.66 -1.3
4,161,134 + MPMX20_03960 0.66 +0.7
4,161,134 + MPMX20_03960 0.66 +0.3
4,161,137 - MPMX20_03960 0.66 +4.4
4,161,137 - MPMX20_03960 0.66 -1.0
4,161,142 - MPMX20_03960 0.67 +0.5
4,161,142 - MPMX20_03960 0.67 -0.3
4,161,142 - MPMX20_03960 0.67 +1.3
4,161,154 + MPMX20_03960 0.67 +0.1
4,161,155 + MPMX20_03960 0.67 +0.7
4,161,162 - MPMX20_03960 0.67 +1.3
4,161,184 - MPMX20_03960 0.68 +0.7
4,161,184 - MPMX20_03960 0.68 -0.5
4,161,199 + MPMX20_03960 0.69 +0.2
4,161,199 + MPMX20_03960 0.69 +0.2
4,161,207 - MPMX20_03960 0.70 +0.1
4,161,214 + MPMX20_03960 0.70 +0.3
4,161,237 + MPMX20_03960 0.71 +0.7
4,161,237 + MPMX20_03960 0.71 +0.7
4,161,266 + MPMX20_03960 0.72 -1.0
4,161,266 + MPMX20_03960 0.72 -1.9
4,161,274 - MPMX20_03960 0.73 +0.9
4,161,274 - MPMX20_03960 0.73 +0.3
4,161,274 - MPMX20_03960 0.73 -1.8
4,161,331 + MPMX20_03960 0.75 -0.2
4,161,331 + MPMX20_03960 0.75 -1.1
4,161,331 + MPMX20_03960 0.75 -0.8
4,161,331 + MPMX20_03960 0.75 +1.0
4,161,331 + MPMX20_03960 0.75 +0.0
4,161,339 - MPMX20_03960 0.76 -0.4
4,161,339 - MPMX20_03960 0.76 -1.6
4,161,339 - MPMX20_03960 0.76 +0.7
4,161,339 - MPMX20_03960 0.76 -0.9
4,161,339 - MPMX20_03960 0.76 +0.2
4,161,339 - MPMX20_03960 0.76 -0.1
4,161,341 + MPMX20_03960 0.76 +1.0
4,161,379 + MPMX20_03960 0.77 +0.0
4,161,379 + MPMX20_03960 0.77 +0.0
4,161,387 - MPMX20_03960 0.78 -0.6
4,161,387 - MPMX20_03960 0.78 +0.2
4,161,389 + MPMX20_03960 0.78 -1.6
4,161,415 + MPMX20_03960 0.79 +0.7
4,161,423 - MPMX20_03960 0.79 -0.8
4,161,423 - MPMX20_03960 0.79 +0.5
4,161,437 + MPMX20_03960 0.80 +6.5
4,161,445 - MPMX20_03960 0.80 +0.7
4,161,445 - MPMX20_03960 0.80 +2.3
4,161,502 - MPMX20_03960 0.83 -0.1
4,161,511 + MPMX20_03960 0.83 +0.5
4,161,513 + MPMX20_03960 0.84 -1.2
4,161,530 + MPMX20_03960 0.84 -0.0
4,161,535 + MPMX20_03960 0.85 -2.3
4,161,538 - MPMX20_03960 0.85 -0.3
4,161,631 + MPMX20_03960 0.89 -1.1
4,161,631 + MPMX20_03960 0.89 -0.1
4,161,633 + MPMX20_03960 0.89 -2.7
4,161,639 - MPMX20_03960 0.89 -1.0
4,161,639 - MPMX20_03960 0.89 -1.8
4,161,639 - MPMX20_03960 0.89 +0.5
4,161,700 + -0.5
4,161,700 + -0.3
4,161,700 + -1.1
4,161,700 + -1.3
4,161,700 + +1.4
4,161,700 + +0.0
4,161,708 - +0.0
4,161,708 - +0.3
4,161,708 - -1.0
4,161,708 - +1.3
4,161,708 - -0.3
4,161,708 - -1.1
4,161,742 - -0.5
4,161,868 + -1.1
4,161,874 - -0.6
4,161,881 + -0.7
4,161,881 + +2.3
4,161,881 + -0.5
4,161,920 + +0.3
4,161,920 + -1.0
4,161,921 - -0.3
4,161,928 - +0.0
4,161,933 - -0.1
4,162,005 + MPMX20_03961 0.23 +0.0
4,162,005 + MPMX20_03961 0.23 +0.7
4,162,013 - MPMX20_03961 0.24 -0.1
4,162,013 - MPMX20_03961 0.24 -0.4
4,162,060 + MPMX20_03961 0.33 +0.7
4,162,062 + MPMX20_03961 0.34 +1.7
4,162,070 - MPMX20_03961 0.35 +0.7
4,162,072 + MPMX20_03961 0.35 +0.7
4,162,153 + MPMX20_03961 0.51 +9.6
4,162,161 - MPMX20_03961 0.52 -0.7
4,162,161 - MPMX20_03961 0.52 -0.9
4,162,171 - MPMX20_03961 0.54 +0.3
4,162,232 + MPMX20_03961 0.66 -1.9
4,162,232 + MPMX20_03961 0.66 -1.3
4,162,240 - MPMX20_03961 0.67 -1.2
4,162,240 - MPMX20_03961 0.67 +1.3
4,162,240 - MPMX20_03961 0.67 -0.3
4,162,275 - MPMX20_03961 0.74 -1.5
4,162,303 - MPMX20_03961 0.79 -0.3
4,162,329 + MPMX20_03961 0.84 +0.2
4,162,332 - MPMX20_03961 0.84 -0.3
4,162,368 + -0.8
4,162,421 + +0.2
4,162,432 + -0.9
4,162,435 - +0.3
4,162,435 - +0.5
4,162,437 + -1.4
4,162,437 + -1.9
4,162,437 + -0.4
4,162,437 + +0.5
4,162,445 - -1.4
4,162,445 - -1.3
4,162,463 - -0.9
4,162,464 - +0.7
4,162,472 + -0.9
4,162,480 - +1.3
4,162,507 - MPMX20_03962 0.11 +1.7
4,162,511 + MPMX20_03962 0.11 +0.1
4,162,532 - MPMX20_03962 0.14 +0.1
4,162,567 + MPMX20_03962 0.18 -1.6
4,162,572 + MPMX20_03962 0.18 -0.3
4,162,574 + MPMX20_03962 0.18 +1.7
4,162,575 - MPMX20_03962 0.18 -0.5
4,162,585 + MPMX20_03962 0.20 +0.0
4,162,593 - MPMX20_03962 0.20 +0.0
4,162,593 - MPMX20_03962 0.20 -2.0
4,162,593 - MPMX20_03962 0.20 -1.3
4,162,617 + MPMX20_03962 0.23 +0.6
4,162,619 + MPMX20_03962 0.23 -1.4
4,162,692 - MPMX20_03962 0.31 -2.1
4,162,717 + MPMX20_03962 0.34 -0.3
4,162,717 + MPMX20_03962 0.34 -0.7
4,162,717 + MPMX20_03962 0.34 +0.3
4,162,755 + MPMX20_03962 0.38 -0.4
4,162,774 - MPMX20_03962 0.40 +0.2
4,162,774 - MPMX20_03962 0.40 -1.3
4,162,794 + MPMX20_03962 0.43 +0.0
4,162,814 + MPMX20_03962 0.45 +1.0
4,162,823 + MPMX20_03962 0.46 -0.1
4,162,842 + MPMX20_03962 0.48 +0.2
4,163,008 + MPMX20_03962 0.66 +0.9
4,163,013 - MPMX20_03962 0.67 -2.3
4,163,023 + MPMX20_03962 0.68 -0.5
4,163,025 + MPMX20_03962 0.68 -0.6
4,163,025 + MPMX20_03962 0.68 -2.0
4,163,035 + MPMX20_03962 0.69 -1.9
4,163,035 + MPMX20_03962 0.69 -0.3
4,163,043 - MPMX20_03962 0.70 +0.5
4,163,043 - MPMX20_03962 0.70 -0.3
4,163,043 - MPMX20_03962 0.70 +0.4
4,163,043 - MPMX20_03962 0.70 +0.0
4,163,043 - MPMX20_03962 0.70 -0.2
4,163,043 - MPMX20_03962 0.70 -0.2
4,163,045 + MPMX20_03962 0.70 +1.3
4,163,073 - MPMX20_03962 0.73 +0.6
4,163,134 + MPMX20_03962 0.80 -2.3
4,163,167 - MPMX20_03962 0.84 -1.5
4,163,167 - MPMX20_03962 0.84 -0.7
4,163,171 + MPMX20_03962 0.84 -0.0
4,163,196 - MPMX20_03962 0.87 +0.2
4,163,204 + MPMX20_03962 0.88 -0.1
4,163,209 + MPMX20_03962 0.88 -1.6
4,163,209 + MPMX20_03962 0.88 -1.8
4,163,219 + MPMX20_03962 0.89 -1.2
4,163,317 + +0.9
4,163,353 + +2.9
4,163,388 - MPMX20_03963 0.19 -0.2
4,163,388 - MPMX20_03963 0.19 +1.3

Or see this region's nucleotide sequence