Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02702

Experiment: M9 plate, 1:1 coculture with Chryseobacterium proteolyticum TBS_027

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02700 and MPMX20_02701 are separated by 67 nucleotidesMPMX20_02701 and MPMX20_02702 are separated by 201 nucleotidesMPMX20_02702 and MPMX20_02703 are separated by 143 nucleotidesMPMX20_02703 and MPMX20_02704 are separated by 27 nucleotides MPMX20_02700: MPMX20_02700 - hypothetical protein, at 2,854,622 to 2,856,154 _02700 MPMX20_02701: MPMX20_02701 - Fatty acid metabolism regulator protein, at 2,856,222 to 2,856,941 _02701 MPMX20_02702: MPMX20_02702 - Na(+)/H(+) antiporter NhaB, at 2,857,143 to 2,858,681 _02702 MPMX20_02703: MPMX20_02703 - Disulfide bond formation protein B, at 2,858,825 to 2,859,355 _02703 MPMX20_02704: MPMX20_02704 - hypothetical protein, at 2,859,383 to 2,859,826 _02704 Position (kb) 2857 2858 2859Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7 8 9 10 11at 2856.151 kb on + strandat 2856.162 kb on - strandat 2856.162 kb on - strandat 2856.197 kb on + strandat 2856.236 kb on - strandat 2856.318 kb on + strand, within MPMX20_02701at 2856.545 kb on + strand, within MPMX20_02701at 2856.550 kb on + strand, within MPMX20_02701at 2856.555 kb on + strand, within MPMX20_02701at 2856.572 kb on + strand, within MPMX20_02701at 2856.574 kb on + strand, within MPMX20_02701at 2856.739 kb on + strand, within MPMX20_02701at 2856.975 kb on + strandat 2856.980 kb on + strandat 2857.000 kb on + strandat 2857.010 kb on + strandat 2857.078 kb on + strandat 2857.201 kb on + strandat 2857.201 kb on + strandat 2857.201 kb on + strandat 2857.209 kb on - strandat 2857.209 kb on - strandat 2857.209 kb on - strandat 2857.209 kb on - strandat 2857.223 kb on - strandat 2857.223 kb on - strandat 2857.231 kb on - strandat 2857.246 kb on + strandat 2857.254 kb on - strandat 2857.254 kb on - strandat 2857.290 kb on + strandat 2857.290 kb on + strandat 2857.302 kb on + strand, within MPMX20_02702at 2857.302 kb on + strand, within MPMX20_02702at 2857.314 kb on + strand, within MPMX20_02702at 2857.327 kb on + strand, within MPMX20_02702at 2857.335 kb on - strand, within MPMX20_02702at 2857.337 kb on + strand, within MPMX20_02702at 2857.379 kb on + strand, within MPMX20_02702at 2857.384 kb on + strand, within MPMX20_02702at 2857.387 kb on - strand, within MPMX20_02702at 2857.513 kb on - strand, within MPMX20_02702at 2857.605 kb on - strand, within MPMX20_02702at 2857.607 kb on - strand, within MPMX20_02702at 2857.651 kb on + strand, within MPMX20_02702at 2857.663 kb on + strand, within MPMX20_02702at 2857.682 kb on + strand, within MPMX20_02702at 2857.749 kb on - strand, within MPMX20_02702at 2857.768 kb on - strand, within MPMX20_02702at 2857.770 kb on + strand, within MPMX20_02702at 2857.770 kb on + strand, within MPMX20_02702at 2857.770 kb on + strand, within MPMX20_02702at 2857.770 kb on + strand, within MPMX20_02702at 2857.884 kb on + strand, within MPMX20_02702at 2857.884 kb on + strand, within MPMX20_02702at 2857.884 kb on + strand, within MPMX20_02702at 2857.914 kb on - strand, within MPMX20_02702at 2857.914 kb on - strand, within MPMX20_02702at 2857.917 kb on - strand, within MPMX20_02702at 2857.917 kb on - strand, within MPMX20_02702at 2857.917 kb on - strand, within MPMX20_02702at 2857.970 kb on - strand, within MPMX20_02702at 2857.999 kb on + strand, within MPMX20_02702at 2858.000 kb on - strand, within MPMX20_02702at 2858.007 kb on - strand, within MPMX20_02702at 2858.043 kb on - strand, within MPMX20_02702at 2858.043 kb on - strand, within MPMX20_02702at 2858.122 kb on - strand, within MPMX20_02702at 2858.169 kb on + strand, within MPMX20_02702at 2858.187 kb on + strand, within MPMX20_02702at 2858.264 kb on + strand, within MPMX20_02702at 2858.304 kb on - strand, within MPMX20_02702at 2858.343 kb on + strand, within MPMX20_02702at 2858.370 kb on + strand, within MPMX20_02702at 2858.370 kb on + strand, within MPMX20_02702at 2858.370 kb on + strand, within MPMX20_02702at 2858.378 kb on - strand, within MPMX20_02702at 2858.416 kb on + strand, within MPMX20_02702at 2858.466 kb on - strand, within MPMX20_02702at 2858.507 kb on - strand, within MPMX20_02702at 2858.518 kb on + strand, within MPMX20_02702at 2858.518 kb on + strand, within MPMX20_02702at 2858.518 kb on + strand, within MPMX20_02702at 2858.526 kb on - strand, within MPMX20_02702at 2858.528 kb on + strandat 2858.542 kb on - strandat 2858.561 kb on + strandat 2858.569 kb on - strandat 2858.578 kb on + strandat 2858.578 kb on + strandat 2858.578 kb on + strandat 2858.586 kb on - strandat 2858.591 kb on + strandat 2858.643 kb on - strandat 2858.684 kb on - strandat 2858.757 kb on + strandat 2858.765 kb on - strandat 2858.934 kb on + strand, within MPMX20_02703at 2859.058 kb on + strand, within MPMX20_02703at 2859.099 kb on + strand, within MPMX20_02703at 2859.309 kb on + strandat 2859.422 kb on + strandat 2859.524 kb on + strand, within MPMX20_02704at 2859.531 kb on - strand, within MPMX20_02704at 2859.552 kb on - strand, within MPMX20_02704at 2859.579 kb on - strand, within MPMX20_02704

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Chryseobacterium proteolyticum TBS_027
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2,856,151 + -0.9
2,856,162 - -2.3
2,856,162 - -0.7
2,856,197 + +0.2
2,856,236 - -0.4
2,856,318 + MPMX20_02701 0.13 +0.6
2,856,545 + MPMX20_02701 0.45 -0.0
2,856,550 + MPMX20_02701 0.46 -0.8
2,856,555 + MPMX20_02701 0.46 -0.4
2,856,572 + MPMX20_02701 0.49 -1.1
2,856,574 + MPMX20_02701 0.49 +1.0
2,856,739 + MPMX20_02701 0.72 -0.0
2,856,975 + -1.4
2,856,980 + +0.4
2,857,000 + -1.3
2,857,010 + +0.5
2,857,078 + +0.5
2,857,201 + +0.2
2,857,201 + +0.7
2,857,201 + +1.1
2,857,209 - +2.0
2,857,209 - -0.4
2,857,209 - +0.2
2,857,209 - -0.4
2,857,223 - +0.8
2,857,223 - -1.0
2,857,231 - -0.4
2,857,246 + +0.6
2,857,254 - +0.2
2,857,254 - -2.1
2,857,290 + -1.3
2,857,290 + +1.3
2,857,302 + MPMX20_02702 0.10 -0.2
2,857,302 + MPMX20_02702 0.10 -0.0
2,857,314 + MPMX20_02702 0.11 -2.2
2,857,327 + MPMX20_02702 0.12 +1.8
2,857,335 - MPMX20_02702 0.12 -0.4
2,857,337 + MPMX20_02702 0.13 +0.2
2,857,379 + MPMX20_02702 0.15 +1.6
2,857,384 + MPMX20_02702 0.16 -0.5
2,857,387 - MPMX20_02702 0.16 -0.4
2,857,513 - MPMX20_02702 0.24 -0.8
2,857,605 - MPMX20_02702 0.30 +1.4
2,857,607 - MPMX20_02702 0.30 +0.7
2,857,651 + MPMX20_02702 0.33 +2.8
2,857,663 + MPMX20_02702 0.34 -1.0
2,857,682 + MPMX20_02702 0.35 +0.3
2,857,749 - MPMX20_02702 0.39 -0.6
2,857,768 - MPMX20_02702 0.41 +1.7
2,857,770 + MPMX20_02702 0.41 +0.2
2,857,770 + MPMX20_02702 0.41 +0.9
2,857,770 + MPMX20_02702 0.41 -0.4
2,857,770 + MPMX20_02702 0.41 +0.3
2,857,884 + MPMX20_02702 0.48 +1.3
2,857,884 + MPMX20_02702 0.48 +0.7
2,857,884 + MPMX20_02702 0.48 -1.0
2,857,914 - MPMX20_02702 0.50 -0.3
2,857,914 - MPMX20_02702 0.50 -0.4
2,857,917 - MPMX20_02702 0.50 +0.7
2,857,917 - MPMX20_02702 0.50 -0.3
2,857,917 - MPMX20_02702 0.50 -1.5
2,857,970 - MPMX20_02702 0.54 -0.7
2,857,999 + MPMX20_02702 0.56 -0.7
2,858,000 - MPMX20_02702 0.56 -0.4
2,858,007 - MPMX20_02702 0.56 +1.6
2,858,043 - MPMX20_02702 0.58 +3.0
2,858,043 - MPMX20_02702 0.58 +1.1
2,858,122 - MPMX20_02702 0.64 +0.2
2,858,169 + MPMX20_02702 0.67 -1.0
2,858,187 + MPMX20_02702 0.68 +0.4
2,858,264 + MPMX20_02702 0.73 +0.1
2,858,304 - MPMX20_02702 0.75 +2.6
2,858,343 + MPMX20_02702 0.78 +0.3
2,858,370 + MPMX20_02702 0.80 +11.5
2,858,370 + MPMX20_02702 0.80 +1.6
2,858,370 + MPMX20_02702 0.80 +1.2
2,858,378 - MPMX20_02702 0.80 +1.5
2,858,416 + MPMX20_02702 0.83 +1.6
2,858,466 - MPMX20_02702 0.86 +0.5
2,858,507 - MPMX20_02702 0.89 -0.4
2,858,518 + MPMX20_02702 0.89 -0.0
2,858,518 + MPMX20_02702 0.89 -0.2
2,858,518 + MPMX20_02702 0.89 -0.4
2,858,526 - MPMX20_02702 0.90 +1.1
2,858,528 + -1.1
2,858,542 - -1.6
2,858,561 + +0.6
2,858,569 - -0.6
2,858,578 + -0.2
2,858,578 + -0.8
2,858,578 + -1.0
2,858,586 - -0.3
2,858,591 + -1.4
2,858,643 - -0.3
2,858,684 - -0.9
2,858,757 + -0.4
2,858,765 - +1.6
2,858,934 + MPMX20_02703 0.21 +1.2
2,859,058 + MPMX20_02703 0.44 +1.6
2,859,099 + MPMX20_02703 0.52 -0.3
2,859,309 + +1.1
2,859,422 + +2.1
2,859,524 + MPMX20_02704 0.32 -1.9
2,859,531 - MPMX20_02704 0.33 +0.6
2,859,552 - MPMX20_02704 0.38 +0.5
2,859,579 - MPMX20_02704 0.44 +0.6

Or see this region's nucleotide sequence