Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02627

Experiment: M9 plate, 1:1 coculture with Chryseobacterium proteolyticum TBS_027

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02625 and MPMX20_02626 are separated by 72 nucleotidesMPMX20_02626 and MPMX20_02627 are separated by 106 nucleotidesMPMX20_02627 and MPMX20_02628 are separated by 211 nucleotidesMPMX20_02628 and MPMX20_02629 are separated by 40 nucleotides MPMX20_02625: MPMX20_02625 - Nitrate regulatory protein, at 2,769,836 to 2,771,020 _02625 MPMX20_02626: MPMX20_02626 - Protein YchN, at 2,771,093 to 2,771,446 _02626 MPMX20_02627: MPMX20_02627 - Methyl-accepting chemotaxis protein PctC, at 2,771,553 to 2,773,337 _02627 MPMX20_02628: MPMX20_02628 - hypothetical protein, at 2,773,549 to 2,773,788 _02628 MPMX20_02629: MPMX20_02629 - Glutathione-specific gamma-glutamylcyclotransferase, at 2,773,829 to 2,774,524 _02629 Position (kb) 2771 2772 2773 2774Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7 8 9 10 11at 2770.599 kb on - strand, within MPMX20_02625at 2770.633 kb on - strand, within MPMX20_02625at 2770.683 kb on + strand, within MPMX20_02625at 2770.723 kb on - strand, within MPMX20_02625at 2770.739 kb on + strand, within MPMX20_02625at 2770.747 kb on - strand, within MPMX20_02625at 2770.747 kb on - strand, within MPMX20_02625at 2770.785 kb on - strand, within MPMX20_02625at 2770.791 kb on + strand, within MPMX20_02625at 2770.825 kb on - strand, within MPMX20_02625at 2770.835 kb on - strand, within MPMX20_02625at 2770.835 kb on - strand, within MPMX20_02625at 2770.835 kb on - strand, within MPMX20_02625at 2770.840 kb on + strand, within MPMX20_02625at 2770.841 kb on - strand, within MPMX20_02625at 2770.841 kb on - strand, within MPMX20_02625at 2770.848 kb on - strand, within MPMX20_02625at 2770.865 kb on + strand, within MPMX20_02625at 2770.900 kb on + strand, within MPMX20_02625at 2770.908 kb on + strandat 2770.916 kb on - strandat 2770.916 kb on - strandat 2770.916 kb on - strandat 2770.935 kb on + strandat 2770.938 kb on - strandat 2770.938 kb on - strandat 2770.943 kb on + strandat 2770.971 kb on + strandat 2770.971 kb on + strandat 2770.979 kb on - strandat 2771.028 kb on + strandat 2771.028 kb on + strandat 2771.126 kb on + strandat 2771.167 kb on - strand, within MPMX20_02626at 2771.232 kb on + strand, within MPMX20_02626at 2771.240 kb on - strand, within MPMX20_02626at 2771.323 kb on + strand, within MPMX20_02626at 2771.323 kb on + strand, within MPMX20_02626at 2771.368 kb on + strand, within MPMX20_02626at 2771.412 kb on - strandat 2771.511 kb on - strandat 2771.595 kb on + strandat 2771.657 kb on - strandat 2771.687 kb on - strandat 2771.753 kb on - strand, within MPMX20_02627at 2771.813 kb on + strand, within MPMX20_02627at 2771.893 kb on + strand, within MPMX20_02627at 2771.942 kb on - strand, within MPMX20_02627at 2771.947 kb on - strand, within MPMX20_02627at 2771.956 kb on - strand, within MPMX20_02627at 2772.029 kb on + strand, within MPMX20_02627at 2772.057 kb on + strand, within MPMX20_02627at 2772.065 kb on - strand, within MPMX20_02627at 2772.075 kb on - strand, within MPMX20_02627at 2772.157 kb on + strand, within MPMX20_02627at 2772.169 kb on + strand, within MPMX20_02627at 2772.177 kb on - strand, within MPMX20_02627at 2772.199 kb on - strand, within MPMX20_02627at 2772.317 kb on + strand, within MPMX20_02627at 2772.320 kb on - strand, within MPMX20_02627at 2772.320 kb on - strand, within MPMX20_02627at 2772.389 kb on - strand, within MPMX20_02627at 2772.395 kb on - strand, within MPMX20_02627at 2772.431 kb on + strand, within MPMX20_02627at 2772.462 kb on + strand, within MPMX20_02627at 2772.464 kb on + strand, within MPMX20_02627at 2772.470 kb on - strand, within MPMX20_02627at 2772.679 kb on + strand, within MPMX20_02627at 2772.679 kb on + strand, within MPMX20_02627at 2772.687 kb on - strand, within MPMX20_02627at 2772.802 kb on + strand, within MPMX20_02627at 2772.834 kb on + strand, within MPMX20_02627at 2772.932 kb on + strand, within MPMX20_02627at 2772.954 kb on + strand, within MPMX20_02627at 2772.962 kb on - strand, within MPMX20_02627at 2772.962 kb on - strand, within MPMX20_02627at 2772.967 kb on + strand, within MPMX20_02627at 2772.990 kb on - strand, within MPMX20_02627at 2773.084 kb on + strand, within MPMX20_02627at 2773.181 kb on + strandat 2773.181 kb on + strandat 2773.181 kb on + strandat 2773.189 kb on + strandat 2773.189 kb on - strandat 2773.189 kb on - strandat 2773.445 kb on + strandat 2773.466 kb on - strandat 2773.522 kb on + strandat 2773.527 kb on + strandat 2773.527 kb on + strandat 2773.535 kb on - strandat 2773.535 kb on - strandat 2773.535 kb on - strandat 2773.535 kb on - strandat 2773.607 kb on + strand, within MPMX20_02628at 2773.615 kb on - strand, within MPMX20_02628at 2773.615 kb on - strand, within MPMX20_02628at 2773.615 kb on - strand, within MPMX20_02628at 2773.627 kb on + strand, within MPMX20_02628at 2773.627 kb on + strand, within MPMX20_02628at 2773.627 kb on + strand, within MPMX20_02628at 2773.656 kb on - strand, within MPMX20_02628at 2773.686 kb on - strand, within MPMX20_02628at 2773.699 kb on - strand, within MPMX20_02628at 2773.699 kb on - strand, within MPMX20_02628at 2773.750 kb on - strand, within MPMX20_02628at 2773.805 kb on - strandat 2773.805 kb on - strandat 2773.805 kb on - strandat 2773.851 kb on + strandat 2773.934 kb on + strand, within MPMX20_02629at 2773.939 kb on + strand, within MPMX20_02629at 2773.947 kb on - strand, within MPMX20_02629at 2774.010 kb on + strand, within MPMX20_02629at 2774.018 kb on - strand, within MPMX20_02629at 2774.034 kb on + strand, within MPMX20_02629at 2774.091 kb on - strand, within MPMX20_02629at 2774.122 kb on + strand, within MPMX20_02629at 2774.122 kb on + strand, within MPMX20_02629at 2774.130 kb on - strand, within MPMX20_02629at 2774.214 kb on - strand, within MPMX20_02629at 2774.227 kb on + strand, within MPMX20_02629

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Chryseobacterium proteolyticum TBS_027
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2,770,599 - MPMX20_02625 0.64 -0.9
2,770,633 - MPMX20_02625 0.67 +0.5
2,770,683 + MPMX20_02625 0.71 -0.2
2,770,723 - MPMX20_02625 0.75 -2.6
2,770,739 + MPMX20_02625 0.76 +0.6
2,770,747 - MPMX20_02625 0.77 -0.1
2,770,747 - MPMX20_02625 0.77 -0.1
2,770,785 - MPMX20_02625 0.80 +2.2
2,770,791 + MPMX20_02625 0.81 +0.5
2,770,825 - MPMX20_02625 0.83 -0.9
2,770,835 - MPMX20_02625 0.84 -0.2
2,770,835 - MPMX20_02625 0.84 +2.8
2,770,835 - MPMX20_02625 0.84 +0.6
2,770,840 + MPMX20_02625 0.85 -0.2
2,770,841 - MPMX20_02625 0.85 -0.2
2,770,841 - MPMX20_02625 0.85 -0.1
2,770,848 - MPMX20_02625 0.85 +0.5
2,770,865 + MPMX20_02625 0.87 -1.0
2,770,900 + MPMX20_02625 0.90 +1.3
2,770,908 + -0.3
2,770,916 - +1.4
2,770,916 - -0.3
2,770,916 - -2.0
2,770,935 + -0.4
2,770,938 - +0.1
2,770,938 - -1.9
2,770,943 + +0.2
2,770,971 + +0.3
2,770,971 + +1.3
2,770,979 - -1.3
2,771,028 + +1.2
2,771,028 + +1.6
2,771,126 + -1.0
2,771,167 - MPMX20_02626 0.21 +0.1
2,771,232 + MPMX20_02626 0.39 +0.9
2,771,240 - MPMX20_02626 0.42 -0.2
2,771,323 + MPMX20_02626 0.65 -0.7
2,771,323 + MPMX20_02626 0.65 +1.4
2,771,368 + MPMX20_02626 0.78 -0.6
2,771,412 - +0.3
2,771,511 - -0.9
2,771,595 + -1.2
2,771,657 - -0.3
2,771,687 - -0.7
2,771,753 - MPMX20_02627 0.11 -0.2
2,771,813 + MPMX20_02627 0.15 +0.4
2,771,893 + MPMX20_02627 0.19 -0.1
2,771,942 - MPMX20_02627 0.22 -0.9
2,771,947 - MPMX20_02627 0.22 +0.7
2,771,956 - MPMX20_02627 0.23 +0.0
2,772,029 + MPMX20_02627 0.27 +1.5
2,772,057 + MPMX20_02627 0.28 +0.2
2,772,065 - MPMX20_02627 0.29 -1.5
2,772,075 - MPMX20_02627 0.29 -0.6
2,772,157 + MPMX20_02627 0.34 -0.3
2,772,169 + MPMX20_02627 0.35 +0.6
2,772,177 - MPMX20_02627 0.35 -1.6
2,772,199 - MPMX20_02627 0.36 +0.1
2,772,317 + MPMX20_02627 0.43 +11.5
2,772,320 - MPMX20_02627 0.43 -0.6
2,772,320 - MPMX20_02627 0.43 -1.1
2,772,389 - MPMX20_02627 0.47 -1.2
2,772,395 - MPMX20_02627 0.47 +0.9
2,772,431 + MPMX20_02627 0.49 +1.2
2,772,462 + MPMX20_02627 0.51 -0.1
2,772,464 + MPMX20_02627 0.51 +1.7
2,772,470 - MPMX20_02627 0.51 +0.9
2,772,679 + MPMX20_02627 0.63 -0.9
2,772,679 + MPMX20_02627 0.63 -0.1
2,772,687 - MPMX20_02627 0.64 -0.2
2,772,802 + MPMX20_02627 0.70 +1.3
2,772,834 + MPMX20_02627 0.72 -0.8
2,772,932 + MPMX20_02627 0.77 -0.6
2,772,954 + MPMX20_02627 0.78 -1.4
2,772,962 - MPMX20_02627 0.79 +1.5
2,772,962 - MPMX20_02627 0.79 +0.7
2,772,967 + MPMX20_02627 0.79 +1.2
2,772,990 - MPMX20_02627 0.81 -1.6
2,773,084 + MPMX20_02627 0.86 -0.0
2,773,181 + -1.7
2,773,181 + +0.3
2,773,181 + -0.2
2,773,189 + -0.3
2,773,189 - +0.6
2,773,189 - +0.4
2,773,445 + -0.5
2,773,466 - +1.6
2,773,522 + -1.4
2,773,527 + -1.2
2,773,527 + +1.5
2,773,535 - +1.0
2,773,535 - -0.4
2,773,535 - -1.1
2,773,535 - -0.3
2,773,607 + MPMX20_02628 0.24 -0.9
2,773,615 - MPMX20_02628 0.28 +1.7
2,773,615 - MPMX20_02628 0.28 -0.1
2,773,615 - MPMX20_02628 0.28 -2.2
2,773,627 + MPMX20_02628 0.33 +1.6
2,773,627 + MPMX20_02628 0.33 -1.5
2,773,627 + MPMX20_02628 0.33 +1.0
2,773,656 - MPMX20_02628 0.45 -0.9
2,773,686 - MPMX20_02628 0.57 -1.1
2,773,699 - MPMX20_02628 0.62 +0.1
2,773,699 - MPMX20_02628 0.62 -1.2
2,773,750 - MPMX20_02628 0.84 +1.0
2,773,805 - -1.4
2,773,805 - -1.8
2,773,805 - -0.3
2,773,851 + +0.6
2,773,934 + MPMX20_02629 0.15 +0.3
2,773,939 + MPMX20_02629 0.16 +0.3
2,773,947 - MPMX20_02629 0.17 -0.2
2,774,010 + MPMX20_02629 0.26 -2.0
2,774,018 - MPMX20_02629 0.27 +0.7
2,774,034 + MPMX20_02629 0.29 -0.0
2,774,091 - MPMX20_02629 0.38 -0.4
2,774,122 + MPMX20_02629 0.42 -0.8
2,774,122 + MPMX20_02629 0.42 -0.0
2,774,130 - MPMX20_02629 0.43 -0.5
2,774,214 - MPMX20_02629 0.55 +0.8
2,774,227 + MPMX20_02629 0.57 +2.0

Or see this region's nucleotide sequence