Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00758

Experiment: M9 plate, 1:1 coculture with Chryseobacterium proteolyticum TBS_027

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00757 and MPMX20_00758 are separated by 336 nucleotidesMPMX20_00758 and MPMX20_00759 are separated by 128 nucleotidesMPMX20_00759 and MPMX20_00760 are separated by 27 nucleotides MPMX20_00757: MPMX20_00757 - Ribulokinase, at 787,250 to 788,959 _00757 MPMX20_00758: MPMX20_00758 - Arabinose operon regulatory protein, at 789,296 to 790,141 _00758 MPMX20_00759: MPMX20_00759 - Inner membrane protein YabI, at 790,270 to 791,037 _00759 MPMX20_00760: MPMX20_00760 - Thiamine import ATP-binding protein ThiQ, at 791,065 to 791,766 _00760 Position (kb) 789 790 791Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 788.388 kb on + strand, within MPMX20_00757at 788.404 kb on - strand, within MPMX20_00757at 788.451 kb on + strand, within MPMX20_00757at 788.466 kb on - strand, within MPMX20_00757at 788.495 kb on - strand, within MPMX20_00757at 788.504 kb on + strand, within MPMX20_00757at 788.564 kb on + strand, within MPMX20_00757at 788.579 kb on - strand, within MPMX20_00757at 788.581 kb on + strand, within MPMX20_00757at 788.589 kb on - strand, within MPMX20_00757at 788.606 kb on - strand, within MPMX20_00757at 788.627 kb on - strand, within MPMX20_00757at 788.686 kb on + strand, within MPMX20_00757at 788.785 kb on + strand, within MPMX20_00757at 788.790 kb on - strandat 788.837 kb on - strandat 788.842 kb on + strandat 788.842 kb on + strandat 788.842 kb on + strandat 788.842 kb on + strandat 788.842 kb on + strandat 788.850 kb on - strandat 788.850 kb on - strandat 788.871 kb on - strandat 788.871 kb on - strandat 788.871 kb on - strandat 788.895 kb on + strandat 789.002 kb on - strandat 789.069 kb on + strandat 789.188 kb on + strandat 789.196 kb on - strandat 789.230 kb on + strandat 789.230 kb on + strandat 789.336 kb on + strandat 789.359 kb on + strandat 789.359 kb on + strandat 789.360 kb on + strandat 789.375 kb on + strandat 789.426 kb on + strand, within MPMX20_00758at 789.426 kb on + strand, within MPMX20_00758at 789.434 kb on - strand, within MPMX20_00758at 789.434 kb on - strand, within MPMX20_00758at 789.439 kb on - strand, within MPMX20_00758at 789.446 kb on - strand, within MPMX20_00758at 789.575 kb on - strand, within MPMX20_00758at 789.585 kb on + strand, within MPMX20_00758at 789.585 kb on + strand, within MPMX20_00758at 789.618 kb on - strand, within MPMX20_00758at 789.666 kb on + strand, within MPMX20_00758at 789.724 kb on - strand, within MPMX20_00758at 789.758 kb on - strand, within MPMX20_00758at 789.758 kb on - strand, within MPMX20_00758at 789.758 kb on - strand, within MPMX20_00758at 789.773 kb on + strand, within MPMX20_00758at 789.778 kb on - strand, within MPMX20_00758at 789.837 kb on + strand, within MPMX20_00758at 789.847 kb on + strand, within MPMX20_00758at 789.847 kb on + strand, within MPMX20_00758at 789.925 kb on - strand, within MPMX20_00758at 789.940 kb on - strand, within MPMX20_00758at 790.009 kb on + strand, within MPMX20_00758at 790.017 kb on - strand, within MPMX20_00758at 790.017 kb on - strand, within MPMX20_00758at 790.056 kb on + strand, within MPMX20_00758at 790.077 kb on - strandat 790.104 kb on + strandat 790.104 kb on + strandat 790.112 kb on - strandat 790.128 kb on - strandat 790.166 kb on + strandat 790.184 kb on + strandat 790.192 kb on - strandat 790.211 kb on - strandat 790.215 kb on + strandat 790.228 kb on - strandat 790.235 kb on - strandat 790.235 kb on - strandat 790.275 kb on - strandat 790.275 kb on - strandat 790.375 kb on - strand, within MPMX20_00759at 790.490 kb on + strand, within MPMX20_00759at 790.498 kb on - strand, within MPMX20_00759at 790.498 kb on - strand, within MPMX20_00759at 790.498 kb on - strand, within MPMX20_00759at 790.498 kb on - strand, within MPMX20_00759at 790.498 kb on - strand, within MPMX20_00759at 790.519 kb on + strand, within MPMX20_00759at 790.555 kb on + strand, within MPMX20_00759at 790.588 kb on - strand, within MPMX20_00759at 790.703 kb on - strand, within MPMX20_00759at 790.763 kb on + strand, within MPMX20_00759at 790.830 kb on + strand, within MPMX20_00759at 790.830 kb on + strand, within MPMX20_00759at 790.861 kb on + strand, within MPMX20_00759at 790.923 kb on + strand, within MPMX20_00759at 790.945 kb on - strand, within MPMX20_00759at 791.031 kb on - strandat 791.063 kb on + strandat 791.105 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Chryseobacterium proteolyticum TBS_027
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788,388 + MPMX20_00757 0.67 -0.8
788,404 - MPMX20_00757 0.67 +1.8
788,451 + MPMX20_00757 0.70 -0.9
788,466 - MPMX20_00757 0.71 -1.6
788,495 - MPMX20_00757 0.73 -1.7
788,504 + MPMX20_00757 0.73 -0.7
788,564 + MPMX20_00757 0.77 -1.4
788,579 - MPMX20_00757 0.78 -0.2
788,581 + MPMX20_00757 0.78 -0.9
788,589 - MPMX20_00757 0.78 +0.4
788,606 - MPMX20_00757 0.79 +2.4
788,627 - MPMX20_00757 0.81 -1.0
788,686 + MPMX20_00757 0.84 -2.1
788,785 + MPMX20_00757 0.90 -0.6
788,790 - -0.5
788,837 - +0.4
788,842 + -0.9
788,842 + -1.3
788,842 + -0.5
788,842 + +0.1
788,842 + -2.4
788,850 - -0.3
788,850 - +0.6
788,871 - +0.1
788,871 - -1.5
788,871 - +1.4
788,895 + -0.2
789,002 - -0.0
789,069 + -0.4
789,188 + -1.4
789,196 - -0.7
789,230 + -1.5
789,230 + -0.6
789,336 + +1.1
789,359 + +0.8
789,359 + -0.9
789,360 + -0.4
789,375 + -2.4
789,426 + MPMX20_00758 0.15 -0.3
789,426 + MPMX20_00758 0.15 +0.9
789,434 - MPMX20_00758 0.16 -1.1
789,434 - MPMX20_00758 0.16 -0.9
789,439 - MPMX20_00758 0.17 -0.0
789,446 - MPMX20_00758 0.18 -1.2
789,575 - MPMX20_00758 0.33 +2.4
789,585 + MPMX20_00758 0.34 +1.6
789,585 + MPMX20_00758 0.34 +0.3
789,618 - MPMX20_00758 0.38 +0.2
789,666 + MPMX20_00758 0.44 -0.8
789,724 - MPMX20_00758 0.51 -0.6
789,758 - MPMX20_00758 0.55 -2.9
789,758 - MPMX20_00758 0.55 -0.4
789,758 - MPMX20_00758 0.55 +0.8
789,773 + MPMX20_00758 0.56 +0.1
789,778 - MPMX20_00758 0.57 +0.5
789,837 + MPMX20_00758 0.64 +0.0
789,847 + MPMX20_00758 0.65 +2.4
789,847 + MPMX20_00758 0.65 +0.0
789,925 - MPMX20_00758 0.74 +0.8
789,940 - MPMX20_00758 0.76 +0.2
790,009 + MPMX20_00758 0.84 +0.8
790,017 - MPMX20_00758 0.85 +0.2
790,017 - MPMX20_00758 0.85 -2.9
790,056 + MPMX20_00758 0.90 +6.1
790,077 - -0.7
790,104 + -0.9
790,104 + +2.2
790,112 - -0.2
790,128 - -0.4
790,166 + +0.4
790,184 + +2.2
790,192 - -0.9
790,211 - -0.4
790,215 + +0.3
790,228 - -0.7
790,235 - -1.1
790,235 - -2.1
790,275 - +0.1
790,275 - -0.8
790,375 - MPMX20_00759 0.14 -0.3
790,490 + MPMX20_00759 0.29 -0.9
790,498 - MPMX20_00759 0.30 +1.6
790,498 - MPMX20_00759 0.30 -0.6
790,498 - MPMX20_00759 0.30 -0.2
790,498 - MPMX20_00759 0.30 +0.1
790,498 - MPMX20_00759 0.30 +1.4
790,519 + MPMX20_00759 0.32 -0.7
790,555 + MPMX20_00759 0.37 -0.5
790,588 - MPMX20_00759 0.41 +1.2
790,703 - MPMX20_00759 0.56 -0.3
790,763 + MPMX20_00759 0.64 -0.4
790,830 + MPMX20_00759 0.73 -1.3
790,830 + MPMX20_00759 0.73 +0.6
790,861 + MPMX20_00759 0.77 +0.8
790,923 + MPMX20_00759 0.85 +0.8
790,945 - MPMX20_00759 0.88 -0.1
791,031 - -1.1
791,063 + +0.2
791,105 - -0.6

Or see this region's nucleotide sequence