Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00646

Experiment: M9 plate, 1:1 coculture with Chryseobacterium proteolyticum TBS_027

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00644 and MPMX20_00645 are separated by 68 nucleotidesMPMX20_00645 and MPMX20_00646 are separated by 29 nucleotidesMPMX20_00646 and MPMX20_00647 are separated by 1 nucleotides MPMX20_00644: MPMX20_00644 - Methyl-accepting chemotaxis protein I, at 669,346 to 671,139 _00644 MPMX20_00645: MPMX20_00645 - hypothetical protein, at 671,208 to 671,714 _00645 MPMX20_00646: MPMX20_00646 - hypothetical protein, at 671,744 to 672,217 _00646 MPMX20_00647: MPMX20_00647 - hypothetical protein, at 672,219 to 672,959 _00647 Position (kb) 671 672 673Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6 7 8at 670.752 kb on - strand, within MPMX20_00644at 670.766 kb on + strand, within MPMX20_00644at 670.766 kb on + strand, within MPMX20_00644at 670.766 kb on + strand, within MPMX20_00644at 670.774 kb on - strand, within MPMX20_00644at 670.836 kb on + strand, within MPMX20_00644at 670.867 kb on + strand, within MPMX20_00644at 670.895 kb on + strand, within MPMX20_00644at 670.903 kb on - strand, within MPMX20_00644at 670.932 kb on - strand, within MPMX20_00644at 670.994 kb on + strandat 671.006 kb on - strandat 671.037 kb on + strandat 671.045 kb on - strandat 671.085 kb on - strandat 671.150 kb on + strandat 671.152 kb on + strandat 671.167 kb on + strandat 671.258 kb on - strandat 671.285 kb on + strand, within MPMX20_00645at 671.285 kb on + strand, within MPMX20_00645at 671.285 kb on + strand, within MPMX20_00645at 671.285 kb on + strand, within MPMX20_00645at 671.285 kb on + strand, within MPMX20_00645at 671.285 kb on + strand, within MPMX20_00645at 671.293 kb on - strand, within MPMX20_00645at 671.293 kb on - strand, within MPMX20_00645at 671.293 kb on - strand, within MPMX20_00645at 671.293 kb on - strand, within MPMX20_00645at 671.397 kb on + strand, within MPMX20_00645at 671.397 kb on + strand, within MPMX20_00645at 671.402 kb on + strand, within MPMX20_00645at 671.468 kb on - strand, within MPMX20_00645at 671.490 kb on + strand, within MPMX20_00645at 671.535 kb on - strand, within MPMX20_00645at 671.546 kb on + strand, within MPMX20_00645at 671.546 kb on + strand, within MPMX20_00645at 671.547 kb on + strand, within MPMX20_00645at 671.603 kb on + strand, within MPMX20_00645at 671.608 kb on + strand, within MPMX20_00645at 671.608 kb on + strand, within MPMX20_00645at 671.616 kb on - strand, within MPMX20_00645at 671.616 kb on - strand, within MPMX20_00645at 671.749 kb on - strandat 671.754 kb on - strandat 671.764 kb on - strandat 671.834 kb on - strand, within MPMX20_00646at 671.869 kb on + strand, within MPMX20_00646at 671.942 kb on - strand, within MPMX20_00646at 671.986 kb on - strand, within MPMX20_00646at 672.013 kb on + strand, within MPMX20_00646at 672.035 kb on - strand, within MPMX20_00646at 672.049 kb on + strand, within MPMX20_00646at 672.049 kb on + strand, within MPMX20_00646at 672.049 kb on + strand, within MPMX20_00646at 672.119 kb on + strand, within MPMX20_00646at 672.120 kb on + strand, within MPMX20_00646at 672.120 kb on + strand, within MPMX20_00646at 672.128 kb on + strand, within MPMX20_00646at 672.128 kb on + strand, within MPMX20_00646at 672.130 kb on + strand, within MPMX20_00646at 672.138 kb on + strand, within MPMX20_00646at 672.138 kb on - strand, within MPMX20_00646at 672.138 kb on - strand, within MPMX20_00646at 672.152 kb on + strand, within MPMX20_00646at 672.152 kb on + strand, within MPMX20_00646at 672.250 kb on + strandat 672.255 kb on + strandat 672.258 kb on - strandat 672.289 kb on - strandat 672.360 kb on + strand, within MPMX20_00647at 672.368 kb on - strand, within MPMX20_00647at 672.373 kb on - strand, within MPMX20_00647at 672.409 kb on + strand, within MPMX20_00647at 672.409 kb on + strand, within MPMX20_00647at 672.426 kb on - strand, within MPMX20_00647at 672.438 kb on + strand, within MPMX20_00647at 672.439 kb on + strand, within MPMX20_00647at 672.439 kb on + strand, within MPMX20_00647at 672.439 kb on - strand, within MPMX20_00647at 672.446 kb on - strand, within MPMX20_00647at 672.462 kb on - strand, within MPMX20_00647at 672.462 kb on - strand, within MPMX20_00647at 672.478 kb on - strand, within MPMX20_00647at 672.486 kb on + strand, within MPMX20_00647at 672.486 kb on + strand, within MPMX20_00647at 672.489 kb on - strand, within MPMX20_00647at 672.492 kb on - strand, within MPMX20_00647at 672.535 kb on - strand, within MPMX20_00647at 672.542 kb on + strand, within MPMX20_00647at 672.548 kb on + strand, within MPMX20_00647at 672.551 kb on - strand, within MPMX20_00647at 672.553 kb on + strand, within MPMX20_00647at 672.553 kb on + strand, within MPMX20_00647at 672.561 kb on - strand, within MPMX20_00647at 672.704 kb on + strand, within MPMX20_00647at 672.727 kb on + strand, within MPMX20_00647at 672.735 kb on - strand, within MPMX20_00647at 672.759 kb on + strand, within MPMX20_00647at 672.769 kb on - strand, within MPMX20_00647at 672.769 kb on - strand, within MPMX20_00647at 672.879 kb on + strand, within MPMX20_00647at 673.117 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Chryseobacterium proteolyticum TBS_027
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670,752 - MPMX20_00644 0.78 -0.2
670,766 + MPMX20_00644 0.79 -1.0
670,766 + MPMX20_00644 0.79 -0.5
670,766 + MPMX20_00644 0.79 -1.2
670,774 - MPMX20_00644 0.80 +0.5
670,836 + MPMX20_00644 0.83 +0.4
670,867 + MPMX20_00644 0.85 -1.1
670,895 + MPMX20_00644 0.86 -0.3
670,903 - MPMX20_00644 0.87 +0.3
670,932 - MPMX20_00644 0.88 -1.4
670,994 + -1.0
671,006 - -1.6
671,037 + -0.6
671,045 - -0.3
671,085 - +0.5
671,150 + -1.6
671,152 + -0.5
671,167 + -1.1
671,258 - +3.4
671,285 + MPMX20_00645 0.15 +0.8
671,285 + MPMX20_00645 0.15 +0.4
671,285 + MPMX20_00645 0.15 +0.9
671,285 + MPMX20_00645 0.15 +2.4
671,285 + MPMX20_00645 0.15 -0.1
671,285 + MPMX20_00645 0.15 -1.2
671,293 - MPMX20_00645 0.17 +0.2
671,293 - MPMX20_00645 0.17 -0.2
671,293 - MPMX20_00645 0.17 +1.2
671,293 - MPMX20_00645 0.17 -0.7
671,397 + MPMX20_00645 0.37 +1.4
671,397 + MPMX20_00645 0.37 +1.2
671,402 + MPMX20_00645 0.38 -1.1
671,468 - MPMX20_00645 0.51 -1.1
671,490 + MPMX20_00645 0.56 -0.1
671,535 - MPMX20_00645 0.64 -0.4
671,546 + MPMX20_00645 0.67 -1.8
671,546 + MPMX20_00645 0.67 -0.6
671,547 + MPMX20_00645 0.67 +0.1
671,603 + MPMX20_00645 0.78 +0.8
671,608 + MPMX20_00645 0.79 -0.2
671,608 + MPMX20_00645 0.79 -0.6
671,616 - MPMX20_00645 0.80 -0.6
671,616 - MPMX20_00645 0.80 +1.6
671,749 - -1.8
671,754 - +0.0
671,764 - +0.8
671,834 - MPMX20_00646 0.19 +2.0
671,869 + MPMX20_00646 0.26 -0.7
671,942 - MPMX20_00646 0.42 -0.1
671,986 - MPMX20_00646 0.51 -0.8
672,013 + MPMX20_00646 0.57 +0.9
672,035 - MPMX20_00646 0.61 -0.5
672,049 + MPMX20_00646 0.64 -0.6
672,049 + MPMX20_00646 0.64 -0.3
672,049 + MPMX20_00646 0.64 -1.4
672,119 + MPMX20_00646 0.79 +2.4
672,120 + MPMX20_00646 0.79 -0.6
672,120 + MPMX20_00646 0.79 +0.1
672,128 + MPMX20_00646 0.81 +8.5
672,128 + MPMX20_00646 0.81 -0.2
672,130 + MPMX20_00646 0.81 -1.0
672,138 + MPMX20_00646 0.83 +1.6
672,138 - MPMX20_00646 0.83 +0.2
672,138 - MPMX20_00646 0.83 -0.3
672,152 + MPMX20_00646 0.86 -0.5
672,152 + MPMX20_00646 0.86 +0.0
672,250 + -1.6
672,255 + -0.5
672,258 - -0.5
672,289 - +0.9
672,360 + MPMX20_00647 0.19 +2.4
672,368 - MPMX20_00647 0.20 +0.5
672,373 - MPMX20_00647 0.21 -0.2
672,409 + MPMX20_00647 0.26 -0.8
672,409 + MPMX20_00647 0.26 +1.9
672,426 - MPMX20_00647 0.28 -1.2
672,438 + MPMX20_00647 0.30 -0.6
672,439 + MPMX20_00647 0.30 -1.2
672,439 + MPMX20_00647 0.30 -2.0
672,439 - MPMX20_00647 0.30 -0.5
672,446 - MPMX20_00647 0.31 -0.6
672,462 - MPMX20_00647 0.33 -0.8
672,462 - MPMX20_00647 0.33 -1.1
672,478 - MPMX20_00647 0.35 +0.5
672,486 + MPMX20_00647 0.36 +2.4
672,486 + MPMX20_00647 0.36 +0.2
672,489 - MPMX20_00647 0.36 +0.0
672,492 - MPMX20_00647 0.37 +1.4
672,535 - MPMX20_00647 0.43 -0.1
672,542 + MPMX20_00647 0.44 -0.1
672,548 + MPMX20_00647 0.44 -0.6
672,551 - MPMX20_00647 0.45 +0.4
672,553 + MPMX20_00647 0.45 -0.7
672,553 + MPMX20_00647 0.45 -1.2
672,561 - MPMX20_00647 0.46 +2.9
672,704 + MPMX20_00647 0.65 -1.5
672,727 + MPMX20_00647 0.69 +0.4
672,735 - MPMX20_00647 0.70 -0.8
672,759 + MPMX20_00647 0.73 -0.6
672,769 - MPMX20_00647 0.74 -0.7
672,769 - MPMX20_00647 0.74 -0.3
672,879 + MPMX20_00647 0.89 +0.6
673,117 - +0.1

Or see this region's nucleotide sequence