Experiment: M9 plate, 1:1 coculture with Chryseobacterium proteolyticum TBS_027
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00118 and MPMX20_00119 are separated by 9 nucleotides MPMX20_00119 and MPMX20_00120 are separated by 3 nucleotides MPMX20_00120 and MPMX20_00121 are separated by 9 nucleotides
MPMX20_00118: MPMX20_00118 - D-inositol-3-phosphate glycosyltransferase, at 119,421 to 120,626
_00118
MPMX20_00119: MPMX20_00119 - hypothetical protein, at 120,636 to 121,589
_00119
MPMX20_00120: MPMX20_00120 - Murein hydrolase activator EnvC, at 121,593 to 122,876
_00120
MPMX20_00121: MPMX20_00121 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 122,886 to 124,430
_00121
Position (kb) 121
122
123 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 120.636 kb on - strand at 120.705 kb on - strand at 120.706 kb on + strand at 120.706 kb on + strand at 120.714 kb on - strand at 120.715 kb on - strand at 120.715 kb on - strand at 120.715 kb on - strand at 120.754 kb on + strand, within MPMX20_00119 at 120.781 kb on + strand, within MPMX20_00119 at 120.799 kb on + strand, within MPMX20_00119 at 120.799 kb on + strand, within MPMX20_00119 at 120.799 kb on + strand, within MPMX20_00119 at 120.799 kb on + strand, within MPMX20_00119 at 120.799 kb on - strand, within MPMX20_00119 at 120.799 kb on - strand, within MPMX20_00119 at 120.799 kb on - strand, within MPMX20_00119 at 120.801 kb on + strand, within MPMX20_00119 at 120.856 kb on + strand, within MPMX20_00119 at 120.864 kb on - strand, within MPMX20_00119 at 120.864 kb on - strand, within MPMX20_00119 at 120.912 kb on + strand, within MPMX20_00119 at 120.947 kb on + strand, within MPMX20_00119 at 120.957 kb on - strand, within MPMX20_00119 at 120.963 kb on - strand, within MPMX20_00119 at 121.014 kb on + strand, within MPMX20_00119 at 121.087 kb on + strand, within MPMX20_00119 at 121.087 kb on + strand, within MPMX20_00119 at 121.087 kb on + strand, within MPMX20_00119 at 121.087 kb on + strand, within MPMX20_00119 at 121.087 kb on + strand, within MPMX20_00119 at 121.087 kb on + strand, within MPMX20_00119 at 121.087 kb on + strand, within MPMX20_00119 at 121.087 kb on + strand, within MPMX20_00119 at 121.087 kb on + strand, within MPMX20_00119 at 121.087 kb on + strand, within MPMX20_00119 at 121.095 kb on - strand, within MPMX20_00119 at 121.095 kb on - strand, within MPMX20_00119 at 121.095 kb on - strand, within MPMX20_00119 at 121.095 kb on - strand, within MPMX20_00119 at 121.095 kb on - strand, within MPMX20_00119 at 121.095 kb on - strand, within MPMX20_00119 at 121.095 kb on - strand, within MPMX20_00119 at 121.119 kb on - strand, within MPMX20_00119 at 121.177 kb on + strand, within MPMX20_00119 at 121.196 kb on + strand, within MPMX20_00119 at 121.196 kb on + strand, within MPMX20_00119 at 121.196 kb on + strand, within MPMX20_00119 at 121.204 kb on - strand, within MPMX20_00119 at 121.232 kb on + strand, within MPMX20_00119 at 121.254 kb on + strand, within MPMX20_00119 at 121.293 kb on + strand, within MPMX20_00119 at 121.293 kb on + strand, within MPMX20_00119 at 121.293 kb on + strand, within MPMX20_00119 at 121.293 kb on + strand, within MPMX20_00119 at 121.301 kb on - strand, within MPMX20_00119 at 121.301 kb on - strand, within MPMX20_00119 at 121.345 kb on + strand, within MPMX20_00119 at 121.380 kb on + strand, within MPMX20_00119 at 121.530 kb on - strand at 121.589 kb on + strand at 121.610 kb on + strand at 121.618 kb on - strand at 121.624 kb on + strand at 121.665 kb on + strand at 121.686 kb on - strand at 121.715 kb on + strand at 121.726 kb on + strand, within MPMX20_00120 at 121.726 kb on + strand, within MPMX20_00120 at 121.726 kb on + strand, within MPMX20_00120 at 121.734 kb on - strand, within MPMX20_00120 at 121.848 kb on + strand, within MPMX20_00120 at 121.904 kb on - strand, within MPMX20_00120 at 121.942 kb on - strand, within MPMX20_00120 at 122.032 kb on + strand, within MPMX20_00120 at 122.058 kb on - strand, within MPMX20_00120 at 122.147 kb on - strand, within MPMX20_00120 at 122.181 kb on + strand, within MPMX20_00120 at 122.181 kb on + strand, within MPMX20_00120 at 122.181 kb on + strand, within MPMX20_00120 at 122.192 kb on + strand, within MPMX20_00120 at 122.236 kb on + strand, within MPMX20_00120 at 122.244 kb on - strand, within MPMX20_00120 at 122.244 kb on - strand, within MPMX20_00120 at 122.278 kb on - strand, within MPMX20_00120 at 122.283 kb on - strand, within MPMX20_00120 at 122.350 kb on + strand, within MPMX20_00120 at 122.370 kb on + strand, within MPMX20_00120 at 122.398 kb on + strand, within MPMX20_00120 at 122.471 kb on - strand, within MPMX20_00120 at 122.493 kb on - strand, within MPMX20_00120 at 122.493 kb on - strand, within MPMX20_00120 at 122.493 kb on - strand, within MPMX20_00120 at 122.537 kb on - strand, within MPMX20_00120 at 122.633 kb on - strand, within MPMX20_00120 at 122.645 kb on + strand, within MPMX20_00120 at 122.652 kb on - strand, within MPMX20_00120 at 122.652 kb on - strand, within MPMX20_00120 at 122.663 kb on + strand, within MPMX20_00120 at 122.663 kb on + strand, within MPMX20_00120 at 122.666 kb on - strand, within MPMX20_00120 at 122.681 kb on - strand, within MPMX20_00120 at 122.689 kb on - strand, within MPMX20_00120 at 122.728 kb on + strand, within MPMX20_00120 at 122.772 kb on + strand at 122.772 kb on + strand at 122.805 kb on + strand at 122.805 kb on + strand at 122.813 kb on - strand at 122.819 kb on + strand at 122.921 kb on + strand at 122.929 kb on - strand at 122.938 kb on - strand at 122.983 kb on - strand at 123.000 kb on - strand at 123.021 kb on - strand at 123.047 kb on - strand, within MPMX20_00121 at 123.049 kb on + strand, within MPMX20_00121 at 123.057 kb on - strand, within MPMX20_00121 at 123.062 kb on - strand, within MPMX20_00121 at 123.093 kb on + strand, within MPMX20_00121 at 123.103 kb on + strand, within MPMX20_00121 at 123.147 kb on - strand, within MPMX20_00121 at 123.152 kb on + strand, within MPMX20_00121 at 123.152 kb on + strand, within MPMX20_00121 at 123.160 kb on - strand, within MPMX20_00121 at 123.160 kb on - strand, within MPMX20_00121 at 123.218 kb on + strand, within MPMX20_00121 at 123.218 kb on + strand, within MPMX20_00121 at 123.246 kb on - strand, within MPMX20_00121 at 123.294 kb on + strand, within MPMX20_00121 at 123.296 kb on + strand, within MPMX20_00121 at 123.296 kb on + strand, within MPMX20_00121 at 123.304 kb on - strand, within MPMX20_00121 at 123.314 kb on - strand, within MPMX20_00121 at 123.323 kb on + strand, within MPMX20_00121 at 123.331 kb on - strand, within MPMX20_00121 at 123.391 kb on - strand, within MPMX20_00121 at 123.441 kb on + strand, within MPMX20_00121 at 123.454 kb on - strand, within MPMX20_00121 at 123.484 kb on + strand, within MPMX20_00121 at 123.506 kb on + strand, within MPMX20_00121 at 123.533 kb on - strand, within MPMX20_00121 at 123.538 kb on + strand, within MPMX20_00121 at 123.551 kb on + strand, within MPMX20_00121 at 123.551 kb on + strand, within MPMX20_00121 at 123.611 kb on - strand, within MPMX20_00121 at 123.648 kb on - strand, within MPMX20_00121 at 123.648 kb on - strand, within MPMX20_00121 at 123.815 kb on + strand, within MPMX20_00121 at 123.815 kb on + strand, within MPMX20_00121 at 123.823 kb on - strand, within MPMX20_00121 at 123.825 kb on - strand, within MPMX20_00121 at 123.827 kb on + strand, within MPMX20_00121 at 123.855 kb on + strand, within MPMX20_00121 at 123.862 kb on + strand, within MPMX20_00121 at 123.870 kb on - strand, within MPMX20_00121
Per-strain Table
Position Strand Gene LocusTag Fraction M9 plate, 1:1 coculture with Chryseobacterium proteolyticum TBS_027 remove 120,636 - +0.3 120,705 - +0.3 120,706 + -0.0 120,706 + -1.0 120,714 - +0.9 120,715 - -1.3 120,715 - +0.7 120,715 - -0.9 120,754 + MPMX20_00119 0.12 -0.4 120,781 + MPMX20_00119 0.15 -0.5 120,799 + MPMX20_00119 0.17 -0.3 120,799 + MPMX20_00119 0.17 +0.0 120,799 + MPMX20_00119 0.17 +1.8 120,799 + MPMX20_00119 0.17 +0.5 120,799 - MPMX20_00119 0.17 -0.4 120,799 - MPMX20_00119 0.17 +0.8 120,799 - MPMX20_00119 0.17 +0.3 120,801 + MPMX20_00119 0.17 +0.3 120,856 + MPMX20_00119 0.23 -1.2 120,864 - MPMX20_00119 0.24 +0.2 120,864 - MPMX20_00119 0.24 -2.4 120,912 + MPMX20_00119 0.29 +0.3 120,947 + MPMX20_00119 0.33 +1.0 120,957 - MPMX20_00119 0.34 -0.3 120,963 - MPMX20_00119 0.34 -0.7 121,014 + MPMX20_00119 0.40 -1.3 121,087 + MPMX20_00119 0.47 +1.7 121,087 + MPMX20_00119 0.47 +0.3 121,087 + MPMX20_00119 0.47 -0.3 121,087 + MPMX20_00119 0.47 -0.7 121,087 + MPMX20_00119 0.47 -0.0 121,087 + MPMX20_00119 0.47 +3.0 121,087 + MPMX20_00119 0.47 -2.3 121,087 + MPMX20_00119 0.47 -2.8 121,087 + MPMX20_00119 0.47 -0.9 121,087 + MPMX20_00119 0.47 +0.8 121,095 - MPMX20_00119 0.48 -2.6 121,095 - MPMX20_00119 0.48 +0.0 121,095 - MPMX20_00119 0.48 -2.2 121,095 - MPMX20_00119 0.48 +0.2 121,095 - MPMX20_00119 0.48 +0.4 121,095 - MPMX20_00119 0.48 -0.0 121,095 - MPMX20_00119 0.48 -0.2 121,119 - MPMX20_00119 0.51 -1.0 121,177 + MPMX20_00119 0.57 -1.6 121,196 + MPMX20_00119 0.59 -0.3 121,196 + MPMX20_00119 0.59 -0.5 121,196 + MPMX20_00119 0.59 +0.5 121,204 - MPMX20_00119 0.60 -1.0 121,232 + MPMX20_00119 0.62 -0.4 121,254 + MPMX20_00119 0.65 -1.5 121,293 + MPMX20_00119 0.69 +2.9 121,293 + MPMX20_00119 0.69 +0.9 121,293 + MPMX20_00119 0.69 -0.5 121,293 + MPMX20_00119 0.69 -0.0 121,301 - MPMX20_00119 0.70 +0.4 121,301 - MPMX20_00119 0.70 -1.5 121,345 + MPMX20_00119 0.74 -0.6 121,380 + MPMX20_00119 0.78 -0.6 121,530 - -0.7 121,589 + +0.7 121,610 + +0.4 121,618 - -0.8 121,624 + +0.2 121,665 + -0.3 121,686 - -1.4 121,715 + +0.0 121,726 + MPMX20_00120 0.10 +1.5 121,726 + MPMX20_00120 0.10 +0.8 121,726 + MPMX20_00120 0.10 +0.1 121,734 - MPMX20_00120 0.11 -0.1 121,848 + MPMX20_00120 0.20 +1.2 121,904 - MPMX20_00120 0.24 +2.3 121,942 - MPMX20_00120 0.27 +0.9 122,032 + MPMX20_00120 0.34 +0.6 122,058 - MPMX20_00120 0.36 +0.6 122,147 - MPMX20_00120 0.43 +0.9 122,181 + MPMX20_00120 0.46 +1.3 122,181 + MPMX20_00120 0.46 +0.5 122,181 + MPMX20_00120 0.46 -0.1 122,192 + MPMX20_00120 0.47 -0.2 122,236 + MPMX20_00120 0.50 -0.0 122,244 - MPMX20_00120 0.51 -0.0 122,244 - MPMX20_00120 0.51 +3.4 122,278 - MPMX20_00120 0.53 +1.1 122,283 - MPMX20_00120 0.54 +0.3 122,350 + MPMX20_00120 0.59 +1.6 122,370 + MPMX20_00120 0.61 +0.7 122,398 + MPMX20_00120 0.63 -0.7 122,471 - MPMX20_00120 0.68 +1.0 122,493 - MPMX20_00120 0.70 +0.4 122,493 - MPMX20_00120 0.70 +1.5 122,493 - MPMX20_00120 0.70 +1.1 122,537 - MPMX20_00120 0.74 +1.3 122,633 - MPMX20_00120 0.81 +0.6 122,645 + MPMX20_00120 0.82 +0.3 122,652 - MPMX20_00120 0.82 +0.6 122,652 - MPMX20_00120 0.82 +2.3 122,663 + MPMX20_00120 0.83 +2.3 122,663 + MPMX20_00120 0.83 +0.8 122,666 - MPMX20_00120 0.84 +0.2 122,681 - MPMX20_00120 0.85 -0.5 122,689 - MPMX20_00120 0.85 +0.2 122,728 + MPMX20_00120 0.88 -0.2 122,772 + +0.9 122,772 + +2.9 122,805 + +2.3 122,805 + +2.3 122,813 - +0.3 122,819 + +2.9 122,921 + -0.7 122,929 - +0.7 122,938 - +1.7 122,983 - -0.5 123,000 - +0.2 123,021 - -0.3 123,047 - MPMX20_00121 0.10 -0.0 123,049 + MPMX20_00121 0.11 +0.3 123,057 - MPMX20_00121 0.11 -1.9 123,062 - MPMX20_00121 0.11 -1.3 123,093 + MPMX20_00121 0.13 -0.0 123,103 + MPMX20_00121 0.14 +0.5 123,147 - MPMX20_00121 0.17 +0.7 123,152 + MPMX20_00121 0.17 -0.6 123,152 + MPMX20_00121 0.17 +1.4 123,160 - MPMX20_00121 0.18 -1.2 123,160 - MPMX20_00121 0.18 -0.6 123,218 + MPMX20_00121 0.21 +1.3 123,218 + MPMX20_00121 0.21 -0.9 123,246 - MPMX20_00121 0.23 -0.4 123,294 + MPMX20_00121 0.26 +0.7 123,296 + MPMX20_00121 0.27 +0.8 123,296 + MPMX20_00121 0.27 -0.4 123,304 - MPMX20_00121 0.27 +0.3 123,314 - MPMX20_00121 0.28 -0.0 123,323 + MPMX20_00121 0.28 -1.2 123,331 - MPMX20_00121 0.29 +2.3 123,391 - MPMX20_00121 0.33 +0.1 123,441 + MPMX20_00121 0.36 -0.3 123,454 - MPMX20_00121 0.37 -0.6 123,484 + MPMX20_00121 0.39 +0.1 123,506 + MPMX20_00121 0.40 -1.2 123,533 - MPMX20_00121 0.42 +0.4 123,538 + MPMX20_00121 0.42 +0.6 123,551 + MPMX20_00121 0.43 +0.3 123,551 + MPMX20_00121 0.43 +0.1 123,611 - MPMX20_00121 0.47 +0.1 123,648 - MPMX20_00121 0.49 +0.2 123,648 - MPMX20_00121 0.49 +0.3 123,815 + MPMX20_00121 0.60 +1.3 123,815 + MPMX20_00121 0.60 +1.0 123,823 - MPMX20_00121 0.61 -1.1 123,825 - MPMX20_00121 0.61 -0.3 123,827 + MPMX20_00121 0.61 -0.2 123,855 + MPMX20_00121 0.63 -0.3 123,862 + MPMX20_00121 0.63 +1.3 123,870 - MPMX20_00121 0.64 -2.1
Or see this region's nucleotide sequence