Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03556

Experiment: 1X LB plate, 1:1 coculture with Pseudomonas lini TBS_031

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1X LB plate, 1:1 coculture with Pseudomonas lini TBS_031
3,746,442	-		MPMX20_03553	0.63	-1.6
3,746,449	-		MPMX20_03553	0.65	+0.3
3,746,453	-		MPMX20_03553	0.67	+0.3
3,746,454	+		MPMX20_03553	0.67	+0.1
3,746,462	-		MPMX20_03553	0.69	-0.5
3,746,543	+				-1.2
3,746,543	+				+0.1
3,746,574	+				-0.2
3,746,574	+				-0.9
3,746,574	+				-0.5
3,746,582	-				-1.3
3,746,582	-				+0.7
3,746,582	-				+0.1
3,746,582	-				+0.3
3,746,582	-				+0.5
3,746,653	+				-0.8
3,746,661	-				-0.8
3,746,774	+				-1.0
3,746,847	+		MPMX20_03554	0.14	+1.5
3,746,850	-		MPMX20_03554	0.15	+0.6
3,746,855	-		MPMX20_03554	0.17	+0.2
3,746,874	+		MPMX20_03554	0.25	+0.9
3,746,889	-		MPMX20_03554	0.31	+0.9
3,746,889	-		MPMX20_03554	0.31	+0.1
3,746,903	+		MPMX20_03554	0.37	+0.3
3,746,908	+		MPMX20_03554	0.39	-0.7
3,746,908	+		MPMX20_03554	0.39	+4.1
3,746,908	+		MPMX20_03554	0.39	-0.7
3,746,908	+		MPMX20_03554	0.39	-1.5
3,746,911	-		MPMX20_03554	0.40	+0.1
3,746,931	+		MPMX20_03554	0.49	-0.2
3,746,990	-		MPMX20_03554	0.73	+0.7
3,747,046	+				-1.3
3,747,051	+				+2.3
3,747,059	-				-1.6
3,747,104	-		MPMX20_03555	0.13	+1.0
3,747,143	-		MPMX20_03555	0.23	-0.5
3,747,154	+		MPMX20_03555	0.25	+9.9
3,747,154	+		MPMX20_03555	0.25	+0.9
3,747,162	-		MPMX20_03555	0.27	+0.7
3,747,225	+		MPMX20_03555	0.43	-2.0
3,747,269	-		MPMX20_03555	0.53	-0.9
3,747,322	-		MPMX20_03555	0.66	-0.5
3,747,322	-		MPMX20_03555	0.66	-0.4
3,747,322	-		MPMX20_03555	0.66	-2.4
3,747,322	-		MPMX20_03555	0.66	+0.3
3,747,322	-		MPMX20_03555	0.66	-0.9
3,747,322	-		MPMX20_03555	0.66	-0.2
3,747,380	-		MPMX20_03555	0.80	-0.7
3,747,382	+		MPMX20_03555	0.81	+2.3
3,747,382	+		MPMX20_03555	0.81	-1.1
3,747,382	+		MPMX20_03555	0.81	-0.4
3,747,390	-		MPMX20_03555	0.83	-1.3
3,747,390	-		MPMX20_03555	0.83	-0.4
3,747,390	-		MPMX20_03555	0.83	+0.7
3,747,390	-		MPMX20_03555	0.83	-0.5
3,747,390	-		MPMX20_03555	0.83	+0.5
3,747,390	-		MPMX20_03555	0.83	-2.0
3,747,392	+		MPMX20_03555	0.83	-0.1
3,747,392	+		MPMX20_03555	0.83	+6.2
3,747,392	+		MPMX20_03555	0.83	+0.3
3,747,394	+		MPMX20_03555	0.84	+2.0
3,747,455	+				-0.2
3,747,485	+				-0.0
3,747,576	+				-0.9
3,747,588	+				-0.1
3,747,588	+				+0.1
3,747,589	+				+1.6
3,747,589	+				-0.0
3,747,597	-				+0.3
3,747,630	+				-0.6
3,747,638	-				-0.9
3,747,638	-				+0.5
3,747,671	-		MPMX20_03556	0.11	+0.8
3,747,688	-		MPMX20_03556	0.12	+1.2
3,747,706	+		MPMX20_03556	0.13	-2.0
3,747,706	+		MPMX20_03556	0.13	+1.0
3,747,713	-		MPMX20_03556	0.13	+0.3
3,747,753	+		MPMX20_03556	0.15	-0.2
3,747,772	-		MPMX20_03556	0.16	-0.8
3,747,772	-		MPMX20_03556	0.16	-0.9
3,747,814	-		MPMX20_03556	0.18	-1.9
3,747,827	+		MPMX20_03556	0.18	-1.3
3,747,832	+		MPMX20_03556	0.19	+0.7
3,747,835	-		MPMX20_03556	0.19	-1.7
3,747,849	+		MPMX20_03556	0.19	+0.1
3,747,989	+		MPMX20_03556	0.26	+0.6
3,747,997	-		MPMX20_03556	0.26	-1.7
3,748,021	+		MPMX20_03556	0.27	+1.5
3,748,022	+		MPMX20_03556	0.27	+0.1
3,748,074	+		MPMX20_03556	0.30	+0.8
3,748,079	+		MPMX20_03556	0.30	+1.5
3,748,201	+		MPMX20_03556	0.36	-0.1
3,748,203	+		MPMX20_03556	0.36	-0.1
3,748,319	+		MPMX20_03556	0.41	+6.7
3,748,327	-		MPMX20_03556	0.42	+0.5
3,748,356	+		MPMX20_03556	0.43	+0.5
3,748,378	-		MPMX20_03556	0.44	+0.7
3,748,393	+		MPMX20_03556	0.45	-1.2
3,748,400	+		MPMX20_03556	0.45	-0.2
3,748,510	+		MPMX20_03556	0.50	-2.5
3,748,611	+		MPMX20_03556	0.55	-0.5
3,748,647	-		MPMX20_03556	0.57	+2.5
3,748,659	-		MPMX20_03556	0.57	+1.7
3,748,674	-		MPMX20_03556	0.58	+1.2
3,748,714	-		MPMX20_03556	0.60	-1.7
3,748,765	+		MPMX20_03556	0.62	+0.5
3,748,782	+		MPMX20_03556	0.63	+2.5
3,748,835	+		MPMX20_03556	0.65	+1.5
3,748,835	+		MPMX20_03556	0.65	+0.8
3,748,835	+		MPMX20_03556	0.65	+0.5
3,748,877	+		MPMX20_03556	0.67	-0.8
3,748,882	+		MPMX20_03556	0.68	-2.2
3,748,882	+		MPMX20_03556	0.68	-1.0
3,748,890	-		MPMX20_03556	0.68	+1.5
3,748,939	-		MPMX20_03556	0.70	+0.6
3,748,948	-		MPMX20_03556	0.71	+0.7
3,748,984	-		MPMX20_03556	0.72	-0.4
3,749,011	+		MPMX20_03556	0.74	+0.3
3,749,019	-		MPMX20_03556	0.74	+0.9
3,749,036	-		MPMX20_03556	0.75	+1.5
3,749,088	+		MPMX20_03556	0.77	+0.9
3,749,216	-		MPMX20_03556	0.83	-0.8
3,749,273	-		MPMX20_03556	0.86	-2.3
3,749,274	+		MPMX20_03556	0.86	-0.6
3,749,282	-		MPMX20_03556	0.86	+0.5
3,749,282	-		MPMX20_03556	0.86	-0.6
3,749,283	-		MPMX20_03556	0.86	-0.1
3,749,322	-		MPMX20_03556	0.88	+0.7
3,749,342	-		MPMX20_03556	0.89	-1.4
3,749,342	-		MPMX20_03556	0.89	-1.4
3,749,472	+				-1.1
3,749,585	+				-0.0
3,749,585	+				+0.5
3,749,601	+				-1.0
3,749,641	+				+0.8
3,749,641	+				-0.9
3,749,650	+				-0.5
3,749,658	-				-1.3
3,749,659	+				-1.2
3,749,659	+				-0.9
3,749,659	+				-0.3
3,749,680	-				+0.6
3,749,733	-		MPMX20_03557	0.15	-0.2
3,749,733	-		MPMX20_03557	0.15	+0.9
3,749,761	-		MPMX20_03557	0.18	+0.0
3,749,770	+		MPMX20_03557	0.19	+1.1
3,749,779	-		MPMX20_03557	0.20	+1.6
3,749,781	+		MPMX20_03557	0.20	+3.5
3,749,781	+		MPMX20_03557	0.20	-2.2
3,749,789	-		MPMX20_03557	0.21	+1.5
3,749,789	-		MPMX20_03557	0.21	-0.4
3,749,789	-		MPMX20_03557	0.21	+0.0
3,749,870	+		MPMX20_03557	0.29	-0.5
3,749,878	-		MPMX20_03557	0.30	+0.9
3,749,884	+		MPMX20_03557	0.31	-0.5
3,749,884	+		MPMX20_03557	0.31	-0.6
3,749,884	+		MPMX20_03557	0.31	-0.3
3,749,892	-		MPMX20_03557	0.32	-0.4
3,749,892	-		MPMX20_03557	0.32	-0.0
3,749,897	+		MPMX20_03557	0.32	+2.0
3,749,936	-		MPMX20_03557	0.36	-0.5
3,749,952	+		MPMX20_03557	0.38	-1.3
3,749,952	+		MPMX20_03557	0.38	-0.6
3,749,955	-		MPMX20_03557	0.38	-0.9
3,749,955	-		MPMX20_03557	0.38	-0.1
3,749,955	-		MPMX20_03557	0.38	+1.1
3,749,955	-		MPMX20_03557	0.38	+0.1
3,749,988	+		MPMX20_03557	0.42	-0.2
3,749,993	+		MPMX20_03557	0.42	+2.5
3,750,006	+		MPMX20_03557	0.44	+0.8
3,750,082	-		MPMX20_03557	0.52	+0.9
3,750,091	+		MPMX20_03557	0.53	-0.1
3,750,091	+		MPMX20_03557	0.53	+0.3
3,750,091	+		MPMX20_03557	0.53	-1.7
3,750,091	+		MPMX20_03557	0.53	-0.0
3,750,091	+		MPMX20_03557	0.53	-0.6
3,750,099	-		MPMX20_03557	0.53	-0.1
3,750,099	-		MPMX20_03557	0.53	-0.3
3,750,099	-		MPMX20_03557	0.53	-0.0
3,750,099	-		MPMX20_03557	0.53	+0.8
3,750,101	+		MPMX20_03557	0.54	-0.2
3,750,104	-		MPMX20_03557	0.54	-0.1
3,750,110	+		MPMX20_03557	0.54	-0.5
3,750,123	-		MPMX20_03557	0.56	-1.8
3,750,123	-		MPMX20_03557	0.56	+0.9
3,750,128	+		MPMX20_03557	0.56	-1.3
3,750,141	-		MPMX20_03557	0.58	+0.2
3,750,163	+		MPMX20_03557	0.60	-0.4
3,750,163	+		MPMX20_03557	0.60	-0.9
3,750,163	+		MPMX20_03557	0.60	+0.7
3,750,163	+		MPMX20_03557	0.60	-1.4
3,750,166	+		MPMX20_03557	0.60	-1.6
3,750,174	-		MPMX20_03557	0.61	-0.3
3,750,177	-		MPMX20_03557	0.61	+0.7
3,750,185	+		MPMX20_03557	0.62	-0.5
3,750,202	+		MPMX20_03557	0.64	+0.9
3,750,202	+		MPMX20_03557	0.64	+1.6
3,750,202	+		MPMX20_03557	0.64	+0.4
3,750,203	+		MPMX20_03557	0.64	-0.8
3,750,207	+		MPMX20_03557	0.65	-1.0
3,750,207	+		MPMX20_03557	0.65	+0.5
3,750,210	-		MPMX20_03557	0.65	-0.1
3,750,210	-		MPMX20_03557	0.65	+1.5
3,750,216	-		MPMX20_03557	0.66	+0.1
3,750,245	-		MPMX20_03557	0.69	-1.3
3,750,268	+		MPMX20_03557	0.71	+1.0
3,750,269	+		MPMX20_03557	0.71	+0.0
3,750,278	+		MPMX20_03557	0.72	+0.1
3,750,278	+		MPMX20_03557	0.72	-0.7
3,750,288	+		MPMX20_03557	0.73	-1.1
3,750,288	+		MPMX20_03557	0.73	+2.6
3,750,288	+		MPMX20_03557	0.73	-1.6
3,750,288	+		MPMX20_03557	0.73	-0.5
3,750,288	+		MPMX20_03557	0.73	+1.7
3,750,288	+		MPMX20_03557	0.73	-0.3
3,750,296	-		MPMX20_03557	0.74	+0.5
3,750,296	-		MPMX20_03557	0.74	-1.1
3,750,296	-		MPMX20_03557	0.74	+0.7
3,750,301	-		MPMX20_03557	0.74	-0.3
3,750,320	+		MPMX20_03557	0.76	-0.7
3,750,320	+		MPMX20_03557	0.76	-0.2
3,750,320	+		MPMX20_03557	0.76	+0.7
3,750,320	+		MPMX20_03557	0.76	-0.9
3,750,327	-		MPMX20_03557	0.77	-0.7
3,750,328	-		MPMX20_03557	0.77	-0.6
3,750,328	-		MPMX20_03557	0.77	-0.5
3,750,341	-		MPMX20_03557	0.79	+0.1
3,750,357	+		MPMX20_03557	0.80	-1.0
3,750,365	-		MPMX20_03557	0.81	-0.1
3,750,375	-		MPMX20_03557	0.82	-0.1
3,750,384	-		MPMX20_03557	0.83	+0.1
3,750,391	+		MPMX20_03557	0.84	+1.7
3,750,391	+		MPMX20_03557	0.84	+1.0
3,750,406	+		MPMX20_03557	0.85	-0.5
3,750,406	+		MPMX20_03557	0.85	-0.1
3,750,424	-		MPMX20_03557	0.87	-1.2
3,750,439	+		MPMX20_03557	0.89	-1.8
3,750,442	+		MPMX20_03557	0.89	+0.8
3,750,442	+		MPMX20_03557	0.89	-0.1
3,750,442	+		MPMX20_03557	0.89	+0.7
3,750,442	+		MPMX20_03557	0.89	+1.5
3,750,442	+		MPMX20_03557	0.89	+1.1
3,750,442	+		MPMX20_03557	0.89	-1.9
3,750,442	+		MPMX20_03557	0.89	-0.4
3,750,442	+		MPMX20_03557	0.89	+0.4
3,750,444	+		MPMX20_03557	0.89	-0.9
3,750,447	+		MPMX20_03557	0.90	+0.9
3,750,447	+		MPMX20_03557	0.90	-0.3
3,750,450	-		MPMX20_03557	0.90	-1.3
3,750,450	-		MPMX20_03557	0.90	+0.5
3,750,482	+				+0.7
3,750,482	+				+0.0
3,750,482	+				+0.4
3,750,482	+				+1.6
3,750,482	+				+0.3
3,750,487	+				-0.7
3,750,487	+				-0.4
3,750,487	+				+0.7
3,750,487	+				+0.7
3,750,487	+				+0.1
3,750,487	+				-1.0
3,750,490	-				+0.3
3,750,491	+				-0.8
3,750,492	+				+0.8
3,750,492	+				-0.8
3,750,495	+				-0.1
3,750,499	+				+0.8
3,750,499	+				-0.6
3,750,499	+				-0.9
3,750,499	+				-0.6
3,750,499	+				+0.9
3,750,499	+				+0.5
3,750,499	+				+0.3
3,750,499	+				+1.7
3,750,499	+				-0.9
3,750,499	+				-0.5
3,750,499	+				-0.1
3,750,504	+				+0.7
3,750,504	+				-0.4
3,750,504	+				+1.5
3,750,504	+				-0.6
3,750,504	+				+0.5
3,750,504	+				-0.6
3,750,504	+				-2.1
3,750,504	+				-2.0
3,750,504	+				-0.2
3,750,504	+				+0.3
3,750,504	+				-0.1
3,750,504	+				+1.6
3,750,504	+				+0.0
3,750,506	+				-0.1
3,750,506	+				+1.5
3,750,507	-				+2.5
3,750,509	+				+0.5
3,750,509	+				+2.1
3,750,509	+				-0.1
3,750,509	+				-0.6
3,750,509	+				-0.8
3,750,509	+				-0.2
3,750,511	+				-1.2
3,750,511	+				+1.6
3,750,511	+				+0.1
3,750,511	+				+0.0
3,750,511	+				-0.9
3,750,511	+				+2.5
3,750,511	+				-0.4
3,750,511	+				-0.8
3,750,511	+				+1.1
3,750,511	+				+0.5
3,750,511	+				+2.1
3,750,511	+				-1.0
3,750,512	-				-0.5
3,750,513	+				-0.3
3,750,513	+				-0.3
3,750,517	-				-0.1
3,750,519	+				-0.6
3,750,519	+				-0.9
3,750,519	-				+1.5
3,750,521	+				+0.2
3,750,521	+				+0.2
3,750,521	+				-0.3
3,750,521	+				-0.2
3,750,521	+				+0.5
3,750,524	+				-0.4
3,750,526	+				+0.8
3,750,526	+				+1.0
3,750,526	+				-0.8
3,750,526	+				-0.1
3,750,540	+				+0.9
3,750,553	+				-1.1