Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02079

Experiment: 1X LB plate, 1:1 coculture with Pseudomonas lini TBS_031

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1X LB plate, 1:1 coculture with Pseudomonas lini TBS_031
2,170,104	-		MPMX20_02077	0.73	-0.9
2,170,131	-		MPMX20_02077	0.77	-1.0
2,170,131	-		MPMX20_02077	0.77	+0.5
2,170,131	-		MPMX20_02077	0.77	-0.2
2,170,156	-		MPMX20_02077	0.80	+0.2
2,170,165	+		MPMX20_02077	0.81	+0.1
2,170,300	-				-1.3
2,170,360	+				+0.0
2,170,370	+				-1.5
2,170,379	-		MPMX20_02078	0.11	-0.4
2,170,384	+		MPMX20_02078	0.12	-0.2
2,170,453	+		MPMX20_02078	0.23	-2.0
2,170,453	+		MPMX20_02078	0.23	+1.2
2,170,461	-		MPMX20_02078	0.24	-1.0
2,170,493	-		MPMX20_02078	0.29	-2.8
2,170,527	-		MPMX20_02078	0.34	+0.4
2,170,541	+		MPMX20_02078	0.36	-0.5
2,170,542	-		MPMX20_02078	0.37	-0.6
2,170,558	+		MPMX20_02078	0.39	-0.1
2,170,623	+		MPMX20_02078	0.49	-0.6
2,170,623	+		MPMX20_02078	0.49	-0.8
2,170,623	+		MPMX20_02078	0.49	-0.1
2,170,631	-		MPMX20_02078	0.51	-0.1
2,170,633	+		MPMX20_02078	0.51	+0.6
2,170,641	-		MPMX20_02078	0.52	-0.9
2,170,641	-		MPMX20_02078	0.52	+0.8
2,170,641	-		MPMX20_02078	0.52	+1.6
2,170,641	-		MPMX20_02078	0.52	+0.4
2,170,641	-		MPMX20_02078	0.52	-0.3
2,170,641	-		MPMX20_02078	0.52	+0.0
2,170,773	-		MPMX20_02078	0.73	-1.4
2,170,802	-		MPMX20_02078	0.78	+0.5
2,170,810	-		MPMX20_02078	0.79	-1.8
2,170,875	+		MPMX20_02078	0.89	-0.2
2,170,875	+		MPMX20_02078	0.89	+0.3
2,170,875	+		MPMX20_02078	0.89	-0.5
2,170,883	-				-1.0
2,170,893	-				+0.3
2,170,899	-				+1.9
2,170,980	-				-0.5
2,171,090	+				-0.4
2,171,093	-				-0.6
2,171,098	-				+1.4
2,171,177	+				-1.3
2,171,200	+				-1.0
2,171,255	+				+1.3
2,171,263	-				-0.7
2,171,290	-				-1.3
2,171,320	+				-1.0
2,171,411	+				+0.1
2,171,447	-				-0.0
2,171,492	+		MPMX20_02079	0.11	-1.0
2,171,510	+		MPMX20_02079	0.12	-0.7
2,171,510	+		MPMX20_02079	0.12	-1.2
2,171,518	-		MPMX20_02079	0.12	+0.3
2,171,567	+		MPMX20_02079	0.13	-0.5
2,171,617	+		MPMX20_02079	0.14	-1.4
2,171,720	+		MPMX20_02079	0.17	-1.5
2,171,739	+		MPMX20_02079	0.18	-1.0
2,171,753	-		MPMX20_02079	0.18	+0.7
2,171,785	-		MPMX20_02079	0.19	-0.9
2,171,785	-		MPMX20_02079	0.19	+4.1
2,171,785	-		MPMX20_02079	0.19	-1.3
2,171,998	-		MPMX20_02079	0.25	-0.6
2,172,000	+		MPMX20_02079	0.25	-0.5
2,172,000	+		MPMX20_02079	0.25	+0.4
2,172,008	-		MPMX20_02079	0.25	-0.9
2,172,008	-		MPMX20_02079	0.25	-1.3
2,172,008	-		MPMX20_02079	0.25	-0.4
2,172,008	-		MPMX20_02079	0.25	-0.9
2,172,034	-		MPMX20_02079	0.26	-1.7
2,172,068	-		MPMX20_02079	0.27	+0.4
2,172,152	+		MPMX20_02079	0.29	+0.3
2,172,165	-		MPMX20_02079	0.30	-1.2
2,172,170	-		MPMX20_02079	0.30	+0.3
2,172,335	-		MPMX20_02079	0.34	+0.3
2,172,378	+		MPMX20_02079	0.36	-0.4
2,172,379	+		MPMX20_02079	0.36	+0.5
2,172,379	+		MPMX20_02079	0.36	+3.6
2,172,379	+		MPMX20_02079	0.36	-2.0
2,172,387	-		MPMX20_02079	0.36	+0.7
2,172,411	+		MPMX20_02079	0.37	+1.0
2,172,433	-		MPMX20_02079	0.37	+0.7
2,172,433	-		MPMX20_02079	0.37	-2.6
2,172,455	+		MPMX20_02079	0.38	-1.6
2,172,460	+		MPMX20_02079	0.38	-0.6
2,172,465	+		MPMX20_02079	0.38	-0.7
2,172,488	+		MPMX20_02079	0.39	-0.8
2,172,498	-		MPMX20_02079	0.39	+0.3
2,172,503	-		MPMX20_02079	0.39	-0.2
2,172,565	-		MPMX20_02079	0.41	+0.5
2,172,565	-		MPMX20_02079	0.41	-0.5
2,172,675	-		MPMX20_02079	0.44	+0.0
2,172,768	+		MPMX20_02079	0.46	-1.5
2,172,856	-		MPMX20_02079	0.49	-0.6
2,172,899	-		MPMX20_02079	0.50	+0.3
2,172,901	-		MPMX20_02079	0.50	+1.2
2,172,927	-		MPMX20_02079	0.51	+0.0
2,172,928	-		MPMX20_02079	0.51	+0.5
2,172,978	-		MPMX20_02079	0.52	-1.2
2,173,016	+		MPMX20_02079	0.53	-0.1
2,173,046	-		MPMX20_02079	0.54	-0.1
2,173,046	-		MPMX20_02079	0.54	-0.2
2,173,100	+		MPMX20_02079	0.56	-0.6
2,173,102	-		MPMX20_02079	0.56	+1.3
2,173,247	+		MPMX20_02079	0.60	-0.9
2,173,247	+		MPMX20_02079	0.60	-0.5
2,173,247	+		MPMX20_02079	0.60	-1.5
2,173,247	+		MPMX20_02079	0.60	-0.5
2,173,247	+		MPMX20_02079	0.60	-0.1
2,173,255	-		MPMX20_02079	0.60	+1.6
2,173,255	-		MPMX20_02079	0.60	-0.4
2,173,255	-		MPMX20_02079	0.60	-1.0
2,173,304	+		MPMX20_02079	0.61	-0.6
2,173,312	-		MPMX20_02079	0.62	+0.2
2,173,441	-		MPMX20_02079	0.65	-0.6
2,173,446	-		MPMX20_02079	0.65	-1.2
2,173,446	-		MPMX20_02079	0.65	+0.8
2,173,446	-		MPMX20_02079	0.65	+2.6
2,173,506	-		MPMX20_02079	0.67	+0.2
2,173,568	+		MPMX20_02079	0.69	-0.7
2,173,669	-		MPMX20_02079	0.71	-1.3
2,173,731	-		MPMX20_02079	0.73	+0.0
2,173,762	-		MPMX20_02079	0.74	+1.3
2,173,765	+		MPMX20_02079	0.74	+0.8
2,173,788	-		MPMX20_02079	0.75	-0.9
2,173,820	-		MPMX20_02079	0.76	-0.9
2,173,834	+		MPMX20_02079	0.76	-1.0
2,173,842	-		MPMX20_02079	0.76	-2.0
2,173,860	-		MPMX20_02079	0.77	+0.2
2,173,861	-		MPMX20_02079	0.77	-0.5
2,173,910	-		MPMX20_02079	0.78	-0.4
2,174,028	+		MPMX20_02079	0.81	+0.4
2,174,071	-		MPMX20_02079	0.83	+0.3
2,174,089	-		MPMX20_02079	0.83	-1.4
2,174,101	-		MPMX20_02079	0.83	-1.5
2,174,133	-		MPMX20_02079	0.84	-1.8
2,174,172	+		MPMX20_02079	0.85	-0.8
2,174,172	+		MPMX20_02079	0.85	-0.4
2,174,221	+		MPMX20_02079	0.87	+1.4
2,174,222	-		MPMX20_02079	0.87	-0.2
2,174,284	-		MPMX20_02079	0.89	-0.4
2,174,373	+				-1.7
2,174,399	-				-0.7
2,174,399	-				-0.3
2,174,525	-				-0.4
2,174,532	+				-1.0
2,174,532	+				-0.9
2,174,743	+				-0.5
2,174,743	-				-0.0
2,174,756	-				+0.3
2,174,756	-				-0.9
2,174,758	+				+0.5
2,174,839	+				+0.1
2,174,839	+				-1.0
2,174,839	+				-0.7
2,174,839	+				-1.6
2,174,847	-				+1.9
2,174,847	-				+0.2
2,174,994	-		MPMX20_02080	0.17	+0.0
2,175,050	+		MPMX20_02080	0.20	+0.0
2,175,083	-		MPMX20_02080	0.22	-1.2
2,175,183	-		MPMX20_02080	0.27	-0.2
2,175,256	+		MPMX20_02080	0.31	-2.8
2,175,281	-		MPMX20_02080	0.33	+0.4
2,175,410	+		MPMX20_02080	0.40	-0.1
2,175,521	+		MPMX20_02080	0.46	+1.1
2,175,616	-		MPMX20_02080	0.51	+0.7
2,175,627	-		MPMX20_02080	0.52	-1.0
2,175,681	+		MPMX20_02080	0.55	+1.0
2,175,683	+		MPMX20_02080	0.55	-2.4