Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04621

Experiment: 0.1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04620 and MPMX20_04621 are separated by 222 nucleotidesMPMX20_04621 and MPMX20_04622 overlap by 7 nucleotides MPMX20_04620: MPMX20_04620 - Low affinity potassium transport system protein kup, at 4,838,123 to 4,839,991 _04620 MPMX20_04621: MPMX20_04621 - ATPase RavA, at 4,840,214 to 4,841,710 _04621 MPMX20_04622: MPMX20_04622 - Protein ViaA, at 4,841,704 to 4,843,155 _04622 Position (kb) 4840 4841 4842Strain fitness (log2 ratio) -2 -1 0 1 2 3at 4839.226 kb on - strand, within MPMX20_04620at 4839.271 kb on - strand, within MPMX20_04620at 4839.392 kb on - strand, within MPMX20_04620at 4839.457 kb on + strand, within MPMX20_04620at 4839.462 kb on + strand, within MPMX20_04620at 4839.497 kb on + strand, within MPMX20_04620at 4839.510 kb on - strand, within MPMX20_04620at 4839.541 kb on + strand, within MPMX20_04620at 4839.541 kb on + strand, within MPMX20_04620at 4839.643 kb on - strand, within MPMX20_04620at 4839.708 kb on + strand, within MPMX20_04620at 4839.729 kb on - strand, within MPMX20_04620at 4839.847 kb on - strandat 4839.854 kb on + strandat 4839.914 kb on + strandat 4839.922 kb on - strandat 4839.931 kb on + strandat 4839.946 kb on + strandat 4839.952 kb on + strandat 4839.992 kb on - strandat 4840.015 kb on + strandat 4840.021 kb on - strandat 4840.033 kb on - strandat 4840.091 kb on - strandat 4840.099 kb on + strandat 4840.099 kb on + strandat 4840.099 kb on + strandat 4840.099 kb on + strandat 4840.107 kb on - strandat 4840.131 kb on + strandat 4840.148 kb on - strandat 4840.160 kb on + strandat 4840.160 kb on + strandat 4840.192 kb on + strandat 4840.226 kb on + strandat 4840.234 kb on - strandat 4840.260 kb on - strandat 4840.296 kb on - strandat 4840.304 kb on - strandat 4840.304 kb on - strandat 4840.319 kb on + strandat 4840.319 kb on + strandat 4840.327 kb on - strandat 4840.327 kb on - strandat 4840.327 kb on - strandat 4840.327 kb on - strandat 4840.335 kb on + strandat 4840.337 kb on - strandat 4840.337 kb on - strandat 4840.345 kb on + strandat 4840.352 kb on + strandat 4840.511 kb on - strand, within MPMX20_04621at 4840.515 kb on - strand, within MPMX20_04621at 4840.515 kb on - strand, within MPMX20_04621at 4840.558 kb on + strand, within MPMX20_04621at 4840.558 kb on + strand, within MPMX20_04621at 4840.580 kb on + strand, within MPMX20_04621at 4840.594 kb on + strand, within MPMX20_04621at 4840.684 kb on + strand, within MPMX20_04621at 4840.720 kb on - strand, within MPMX20_04621at 4840.720 kb on - strand, within MPMX20_04621at 4840.722 kb on - strand, within MPMX20_04621at 4840.754 kb on - strand, within MPMX20_04621at 4840.759 kb on - strand, within MPMX20_04621at 4840.791 kb on + strand, within MPMX20_04621at 4840.844 kb on - strand, within MPMX20_04621at 4840.855 kb on + strand, within MPMX20_04621at 4840.855 kb on - strand, within MPMX20_04621at 4840.906 kb on + strand, within MPMX20_04621at 4840.959 kb on - strand, within MPMX20_04621at 4840.994 kb on - strand, within MPMX20_04621at 4840.996 kb on + strand, within MPMX20_04621at 4841.009 kb on - strand, within MPMX20_04621at 4841.011 kb on - strand, within MPMX20_04621at 4841.011 kb on - strand, within MPMX20_04621at 4841.016 kb on - strand, within MPMX20_04621at 4841.048 kb on - strand, within MPMX20_04621at 4841.082 kb on + strand, within MPMX20_04621at 4841.128 kb on + strand, within MPMX20_04621at 4841.131 kb on - strand, within MPMX20_04621at 4841.136 kb on - strand, within MPMX20_04621at 4841.155 kb on - strand, within MPMX20_04621at 4841.158 kb on + strand, within MPMX20_04621at 4841.166 kb on - strand, within MPMX20_04621at 4841.166 kb on - strand, within MPMX20_04621at 4841.188 kb on + strand, within MPMX20_04621at 4841.284 kb on + strand, within MPMX20_04621at 4841.289 kb on + strand, within MPMX20_04621at 4841.289 kb on + strand, within MPMX20_04621at 4841.289 kb on + strand, within MPMX20_04621at 4841.289 kb on + strand, within MPMX20_04621at 4841.303 kb on - strand, within MPMX20_04621at 4841.319 kb on + strand, within MPMX20_04621at 4841.319 kb on + strand, within MPMX20_04621at 4841.319 kb on + strand, within MPMX20_04621at 4841.319 kb on + strand, within MPMX20_04621at 4841.319 kb on + strand, within MPMX20_04621at 4841.319 kb on + strand, within MPMX20_04621at 4841.327 kb on - strand, within MPMX20_04621at 4841.327 kb on - strand, within MPMX20_04621at 4841.327 kb on - strand, within MPMX20_04621at 4841.327 kb on - strand, within MPMX20_04621at 4841.327 kb on - strand, within MPMX20_04621at 4841.327 kb on - strand, within MPMX20_04621at 4841.347 kb on + strand, within MPMX20_04621at 4841.353 kb on - strand, within MPMX20_04621at 4841.353 kb on - strand, within MPMX20_04621at 4841.445 kb on + strand, within MPMX20_04621at 4841.523 kb on - strand, within MPMX20_04621at 4841.533 kb on - strand, within MPMX20_04621at 4841.572 kb on + strandat 4841.580 kb on - strandat 4841.643 kb on + strandat 4841.661 kb on - strandat 4841.715 kb on + strandat 4841.726 kb on + strandat 4841.770 kb on + strandat 4841.779 kb on + strandat 4841.779 kb on + strandat 4841.779 kb on + strandat 4841.930 kb on + strand, within MPMX20_04622at 4841.930 kb on + strand, within MPMX20_04622at 4841.930 kb on + strand, within MPMX20_04622at 4841.930 kb on + strand, within MPMX20_04622at 4841.930 kb on + strand, within MPMX20_04622at 4841.938 kb on - strand, within MPMX20_04622at 4841.938 kb on - strand, within MPMX20_04622at 4841.986 kb on + strand, within MPMX20_04622at 4841.987 kb on + strand, within MPMX20_04622at 4842.073 kb on + strand, within MPMX20_04622at 4842.122 kb on + strand, within MPMX20_04622at 4842.122 kb on + strand, within MPMX20_04622at 4842.155 kb on + strand, within MPMX20_04622at 4842.163 kb on + strand, within MPMX20_04622at 4842.168 kb on + strand, within MPMX20_04622at 4842.186 kb on - strand, within MPMX20_04622at 4842.186 kb on - strand, within MPMX20_04622at 4842.201 kb on - strand, within MPMX20_04622at 4842.220 kb on - strand, within MPMX20_04622at 4842.249 kb on + strand, within MPMX20_04622at 4842.329 kb on + strand, within MPMX20_04622at 4842.357 kb on + strand, within MPMX20_04622at 4842.373 kb on - strand, within MPMX20_04622at 4842.373 kb on - strand, within MPMX20_04622at 4842.446 kb on + strand, within MPMX20_04622at 4842.519 kb on + strand, within MPMX20_04622at 4842.523 kb on - strand, within MPMX20_04622at 4842.570 kb on + strand, within MPMX20_04622at 4842.694 kb on - strand, within MPMX20_04622at 4842.703 kb on - strand, within MPMX20_04622at 4842.704 kb on + strand, within MPMX20_04622

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Per-strain Table

Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037
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4,839,226 - MPMX20_04620 0.59 -0.9
4,839,271 - MPMX20_04620 0.61 -0.5
4,839,392 - MPMX20_04620 0.68 -0.4
4,839,457 + MPMX20_04620 0.71 +0.8
4,839,462 + MPMX20_04620 0.72 -2.0
4,839,497 + MPMX20_04620 0.74 -0.2
4,839,510 - MPMX20_04620 0.74 +1.4
4,839,541 + MPMX20_04620 0.76 -0.9
4,839,541 + MPMX20_04620 0.76 +2.3
4,839,643 - MPMX20_04620 0.81 -0.3
4,839,708 + MPMX20_04620 0.85 -0.3
4,839,729 - MPMX20_04620 0.86 -0.3
4,839,847 - +0.7
4,839,854 + +0.3
4,839,914 + -0.6
4,839,922 - -1.5
4,839,931 + +2.7
4,839,946 + -1.1
4,839,952 + -0.3
4,839,992 - +0.1
4,840,015 + -0.9
4,840,021 - +0.1
4,840,033 - -1.3
4,840,091 - +1.8
4,840,099 + +3.7
4,840,099 + +0.5
4,840,099 + -0.5
4,840,099 + +0.7
4,840,107 - -0.2
4,840,131 + +0.3
4,840,148 - +0.4
4,840,160 + -0.0
4,840,160 + -0.6
4,840,192 + +2.2
4,840,226 + +1.7
4,840,234 - +0.1
4,840,260 - -0.3
4,840,296 - +0.7
4,840,304 - +0.2
4,840,304 - +1.1
4,840,319 + -0.8
4,840,319 + +0.3
4,840,327 - -0.4
4,840,327 - -1.0
4,840,327 - +1.1
4,840,327 - -0.4
4,840,335 + +0.1
4,840,337 - -0.6
4,840,337 - -0.8
4,840,345 + -0.5
4,840,352 + +1.5
4,840,511 - MPMX20_04621 0.20 +0.2
4,840,515 - MPMX20_04621 0.20 +0.2
4,840,515 - MPMX20_04621 0.20 -0.9
4,840,558 + MPMX20_04621 0.23 +1.7
4,840,558 + MPMX20_04621 0.23 -1.1
4,840,580 + MPMX20_04621 0.24 +1.0
4,840,594 + MPMX20_04621 0.25 -1.0
4,840,684 + MPMX20_04621 0.31 -1.3
4,840,720 - MPMX20_04621 0.34 -0.3
4,840,720 - MPMX20_04621 0.34 +1.1
4,840,722 - MPMX20_04621 0.34 +0.7
4,840,754 - MPMX20_04621 0.36 +0.1
4,840,759 - MPMX20_04621 0.36 +0.6
4,840,791 + MPMX20_04621 0.39 +0.7
4,840,844 - MPMX20_04621 0.42 +2.2
4,840,855 + MPMX20_04621 0.43 -0.5
4,840,855 - MPMX20_04621 0.43 +1.3
4,840,906 + MPMX20_04621 0.46 +0.1
4,840,959 - MPMX20_04621 0.50 -1.3
4,840,994 - MPMX20_04621 0.52 -1.4
4,840,996 + MPMX20_04621 0.52 +1.7
4,841,009 - MPMX20_04621 0.53 +0.5
4,841,011 - MPMX20_04621 0.53 -0.2
4,841,011 - MPMX20_04621 0.53 -0.3
4,841,016 - MPMX20_04621 0.54 +0.3
4,841,048 - MPMX20_04621 0.56 +1.1
4,841,082 + MPMX20_04621 0.58 +2.0
4,841,128 + MPMX20_04621 0.61 +0.5
4,841,131 - MPMX20_04621 0.61 -1.6
4,841,136 - MPMX20_04621 0.62 +0.8
4,841,155 - MPMX20_04621 0.63 +0.9
4,841,158 + MPMX20_04621 0.63 -0.8
4,841,166 - MPMX20_04621 0.64 +0.3
4,841,166 - MPMX20_04621 0.64 +0.1
4,841,188 + MPMX20_04621 0.65 -1.3
4,841,284 + MPMX20_04621 0.71 -0.4
4,841,289 + MPMX20_04621 0.72 +0.3
4,841,289 + MPMX20_04621 0.72 +0.3
4,841,289 + MPMX20_04621 0.72 -0.8
4,841,289 + MPMX20_04621 0.72 -0.1
4,841,303 - MPMX20_04621 0.73 -0.5
4,841,319 + MPMX20_04621 0.74 -1.1
4,841,319 + MPMX20_04621 0.74 -0.7
4,841,319 + MPMX20_04621 0.74 +1.1
4,841,319 + MPMX20_04621 0.74 +0.9
4,841,319 + MPMX20_04621 0.74 +0.9
4,841,319 + MPMX20_04621 0.74 +1.7
4,841,327 - MPMX20_04621 0.74 +0.1
4,841,327 - MPMX20_04621 0.74 -0.3
4,841,327 - MPMX20_04621 0.74 -0.6
4,841,327 - MPMX20_04621 0.74 +1.1
4,841,327 - MPMX20_04621 0.74 +0.1
4,841,327 - MPMX20_04621 0.74 -0.6
4,841,347 + MPMX20_04621 0.76 +1.1
4,841,353 - MPMX20_04621 0.76 +0.8
4,841,353 - MPMX20_04621 0.76 -0.2
4,841,445 + MPMX20_04621 0.82 +0.0
4,841,523 - MPMX20_04621 0.87 +1.1
4,841,533 - MPMX20_04621 0.88 -0.3
4,841,572 + +1.1
4,841,580 - +0.3
4,841,643 + +2.3
4,841,661 - +0.1
4,841,715 + -0.5
4,841,726 + -0.8
4,841,770 + -1.9
4,841,779 + +1.3
4,841,779 + +0.8
4,841,779 + -0.6
4,841,930 + MPMX20_04622 0.16 +0.4
4,841,930 + MPMX20_04622 0.16 +1.4
4,841,930 + MPMX20_04622 0.16 +0.1
4,841,930 + MPMX20_04622 0.16 -2.4
4,841,930 + MPMX20_04622 0.16 +0.5
4,841,938 - MPMX20_04622 0.16 +1.1
4,841,938 - MPMX20_04622 0.16 +0.3
4,841,986 + MPMX20_04622 0.19 -1.2
4,841,987 + MPMX20_04622 0.19 +1.7
4,842,073 + MPMX20_04622 0.25 +0.8
4,842,122 + MPMX20_04622 0.29 +0.2
4,842,122 + MPMX20_04622 0.29 -0.3
4,842,155 + MPMX20_04622 0.31 +0.8
4,842,163 + MPMX20_04622 0.32 -2.1
4,842,168 + MPMX20_04622 0.32 -1.7
4,842,186 - MPMX20_04622 0.33 -1.5
4,842,186 - MPMX20_04622 0.33 -0.3
4,842,201 - MPMX20_04622 0.34 +1.1
4,842,220 - MPMX20_04622 0.36 +0.6
4,842,249 + MPMX20_04622 0.38 -1.6
4,842,329 + MPMX20_04622 0.43 +0.1
4,842,357 + MPMX20_04622 0.45 +1.3
4,842,373 - MPMX20_04622 0.46 -0.8
4,842,373 - MPMX20_04622 0.46 +1.7
4,842,446 + MPMX20_04622 0.51 -0.5
4,842,519 + MPMX20_04622 0.56 +0.3
4,842,523 - MPMX20_04622 0.56 -0.3
4,842,570 + MPMX20_04622 0.60 -0.8
4,842,694 - MPMX20_04622 0.68 +0.9
4,842,703 - MPMX20_04622 0.69 -0.5
4,842,704 + MPMX20_04622 0.69 +2.7

Or see this region's nucleotide sequence