Experiment: 0.1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04459 and MPMX20_04460 are separated by 161 nucleotides MPMX20_04460 and MPMX20_04461 are separated by 51 nucleotides MPMX20_04461 and MPMX20_04462 are separated by 42 nucleotides
MPMX20_04459: MPMX20_04459 - Phospholipase A1, at 4,662,792 to 4,663,661
_04459
MPMX20_04460: MPMX20_04460 - hypothetical protein, at 4,663,823 to 4,664,290
_04460
MPMX20_04461: MPMX20_04461 - Protein RarD, at 4,664,342 to 4,665,238
_04461
MPMX20_04462: MPMX20_04462 - Magnesium transport protein CorA, at 4,665,281 to 4,666,231
_04462
Position (kb)
4664
4665
4666 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6
7
8
9 at 4663.384 kb on + strand, within MPMX20_04459 at 4663.438 kb on - strand, within MPMX20_04459 at 4663.549 kb on + strand, within MPMX20_04459 at 4663.552 kb on - strand, within MPMX20_04459 at 4663.562 kb on - strand, within MPMX20_04459 at 4663.602 kb on + strand at 4663.610 kb on - strand at 4663.612 kb on + strand at 4663.612 kb on + strand at 4663.617 kb on + strand at 4663.620 kb on - strand at 4663.644 kb on + strand at 4663.644 kb on + strand at 4663.644 kb on + strand at 4663.644 kb on + strand at 4663.647 kb on - strand at 4663.647 kb on - strand at 4663.652 kb on - strand at 4663.652 kb on - strand at 4663.652 kb on - strand at 4663.652 kb on - strand at 4663.652 kb on - strand at 4663.667 kb on + strand at 4663.667 kb on + strand at 4663.667 kb on - strand at 4663.682 kb on + strand at 4663.891 kb on + strand, within MPMX20_04460 at 4663.897 kb on - strand, within MPMX20_04460 at 4663.943 kb on - strand, within MPMX20_04460 at 4663.980 kb on + strand, within MPMX20_04460 at 4663.988 kb on - strand, within MPMX20_04460 at 4664.016 kb on + strand, within MPMX20_04460 at 4664.047 kb on - strand, within MPMX20_04460 at 4664.147 kb on - strand, within MPMX20_04460 at 4664.192 kb on - strand, within MPMX20_04460 at 4664.208 kb on + strand, within MPMX20_04460 at 4664.238 kb on + strand, within MPMX20_04460 at 4664.243 kb on + strand, within MPMX20_04460 at 4664.248 kb on + strand at 4664.248 kb on + strand at 4664.248 kb on + strand at 4664.248 kb on + strand at 4664.248 kb on + strand at 4664.248 kb on + strand at 4664.256 kb on - strand at 4664.256 kb on - strand at 4664.256 kb on - strand at 4664.275 kb on - strand at 4664.282 kb on - strand at 4664.365 kb on + strand at 4664.380 kb on - strand at 4664.380 kb on - strand at 4664.387 kb on - strand at 4664.455 kb on - strand, within MPMX20_04461 at 4664.503 kb on - strand, within MPMX20_04461 at 4664.511 kb on + strand, within MPMX20_04461 at 4664.513 kb on - strand, within MPMX20_04461 at 4664.556 kb on + strand, within MPMX20_04461 at 4664.572 kb on + strand, within MPMX20_04461 at 4664.584 kb on + strand, within MPMX20_04461 at 4664.614 kb on - strand, within MPMX20_04461 at 4664.614 kb on - strand, within MPMX20_04461 at 4664.638 kb on + strand, within MPMX20_04461 at 4664.643 kb on + strand, within MPMX20_04461 at 4664.643 kb on + strand, within MPMX20_04461 at 4664.674 kb on + strand, within MPMX20_04461 at 4664.679 kb on + strand, within MPMX20_04461 at 4664.679 kb on + strand, within MPMX20_04461 at 4664.679 kb on + strand, within MPMX20_04461 at 4664.687 kb on - strand, within MPMX20_04461 at 4664.692 kb on - strand, within MPMX20_04461 at 4664.735 kb on + strand, within MPMX20_04461 at 4664.765 kb on - strand, within MPMX20_04461 at 4664.779 kb on + strand, within MPMX20_04461 at 4664.801 kb on + strand, within MPMX20_04461 at 4664.987 kb on - strand, within MPMX20_04461 at 4664.997 kb on - strand, within MPMX20_04461 at 4665.025 kb on + strand, within MPMX20_04461 at 4665.025 kb on + strand, within MPMX20_04461 at 4665.084 kb on + strand, within MPMX20_04461 at 4665.209 kb on + strand at 4665.271 kb on + strand at 4665.366 kb on - strand at 4665.407 kb on + strand, within MPMX20_04462 at 4665.468 kb on + strand, within MPMX20_04462 at 4665.473 kb on + strand, within MPMX20_04462 at 4665.678 kb on - strand, within MPMX20_04462 at 4665.724 kb on - strand, within MPMX20_04462 at 4665.774 kb on + strand, within MPMX20_04462 at 4665.774 kb on + strand, within MPMX20_04462 at 4665.868 kb on + strand, within MPMX20_04462 at 4665.876 kb on - strand, within MPMX20_04462 at 4665.915 kb on - strand, within MPMX20_04462 at 4665.915 kb on - strand, within MPMX20_04462 at 4665.922 kb on + strand, within MPMX20_04462 at 4665.970 kb on - strand, within MPMX20_04462 at 4666.145 kb on + strand at 4666.163 kb on - strand at 4666.176 kb on - strand at 4666.182 kb on + strand at 4666.190 kb on - strand at 4666.213 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 0.1X LB plate, 1:1 coculture with Bacillus megaterium TBS_037 remove 4,663,384 + MPMX20_04459 0.68 -1.9 4,663,438 - MPMX20_04459 0.74 +0.2 4,663,549 + MPMX20_04459 0.87 -1.0 4,663,552 - MPMX20_04459 0.87 -0.3 4,663,562 - MPMX20_04459 0.89 +0.3 4,663,602 + +0.5 4,663,610 - -0.6 4,663,612 + +1.6 4,663,612 + +0.1 4,663,617 + -0.9 4,663,620 - -0.5 4,663,644 + +3.2 4,663,644 + -0.2 4,663,644 + +0.0 4,663,644 + -1.8 4,663,647 - -2.7 4,663,647 - -0.4 4,663,652 - +1.0 4,663,652 - +0.0 4,663,652 - -2.9 4,663,652 - -1.4 4,663,652 - +2.6 4,663,667 + -0.8 4,663,667 + +0.3 4,663,667 - -1.1 4,663,682 + +1.0 4,663,891 + MPMX20_04460 0.15 +0.3 4,663,897 - MPMX20_04460 0.16 -0.1 4,663,943 - MPMX20_04460 0.26 +2.9 4,663,980 + MPMX20_04460 0.34 -1.3 4,663,988 - MPMX20_04460 0.35 +1.6 4,664,016 + MPMX20_04460 0.41 -1.1 4,664,047 - MPMX20_04460 0.48 +0.0 4,664,147 - MPMX20_04460 0.69 -0.5 4,664,192 - MPMX20_04460 0.79 -0.4 4,664,208 + MPMX20_04460 0.82 +1.6 4,664,238 + MPMX20_04460 0.89 -0.5 4,664,243 + MPMX20_04460 0.90 -2.0 4,664,248 + +1.3 4,664,248 + -0.3 4,664,248 + -2.7 4,664,248 + +0.4 4,664,248 + -2.2 4,664,248 + -1.0 4,664,256 - -0.9 4,664,256 - +1.2 4,664,256 - -0.5 4,664,275 - -1.1 4,664,282 - -0.1 4,664,365 + +1.0 4,664,380 - +0.3 4,664,380 - +0.3 4,664,387 - +0.6 4,664,455 - MPMX20_04461 0.13 -0.1 4,664,503 - MPMX20_04461 0.18 -0.0 4,664,511 + MPMX20_04461 0.19 -0.8 4,664,513 - MPMX20_04461 0.19 +2.3 4,664,556 + MPMX20_04461 0.24 -1.0 4,664,572 + MPMX20_04461 0.26 +8.9 4,664,584 + MPMX20_04461 0.27 -1.4 4,664,614 - MPMX20_04461 0.30 -0.2 4,664,614 - MPMX20_04461 0.30 -0.4 4,664,638 + MPMX20_04461 0.33 +0.0 4,664,643 + MPMX20_04461 0.34 +0.5 4,664,643 + MPMX20_04461 0.34 +2.0 4,664,674 + MPMX20_04461 0.37 -0.9 4,664,679 + MPMX20_04461 0.38 -1.2 4,664,679 + MPMX20_04461 0.38 -0.8 4,664,679 + MPMX20_04461 0.38 -0.4 4,664,687 - MPMX20_04461 0.38 -0.5 4,664,692 - MPMX20_04461 0.39 -1.4 4,664,735 + MPMX20_04461 0.44 +1.4 4,664,765 - MPMX20_04461 0.47 -0.6 4,664,779 + MPMX20_04461 0.49 +2.6 4,664,801 + MPMX20_04461 0.51 -0.5 4,664,987 - MPMX20_04461 0.72 -1.5 4,664,997 - MPMX20_04461 0.73 -0.9 4,665,025 + MPMX20_04461 0.76 +0.8 4,665,025 + MPMX20_04461 0.76 +2.6 4,665,084 + MPMX20_04461 0.83 -0.4 4,665,209 + -0.2 4,665,271 + -0.6 4,665,366 - +0.3 4,665,407 + MPMX20_04462 0.13 +0.3 4,665,468 + MPMX20_04462 0.20 -0.4 4,665,473 + MPMX20_04462 0.20 -0.4 4,665,678 - MPMX20_04462 0.42 +2.0 4,665,724 - MPMX20_04462 0.47 +2.6 4,665,774 + MPMX20_04462 0.52 +1.3 4,665,774 + MPMX20_04462 0.52 -1.2 4,665,868 + MPMX20_04462 0.62 -0.2 4,665,876 - MPMX20_04462 0.63 +3.0 4,665,915 - MPMX20_04462 0.67 -1.1 4,665,915 - MPMX20_04462 0.67 -1.3 4,665,922 + MPMX20_04462 0.67 -0.5 4,665,970 - MPMX20_04462 0.72 -1.0 4,666,145 + -0.9 4,666,163 - -1.5 4,666,176 - -1.2 4,666,182 + +0.3 4,666,190 - +0.8 4,666,213 + -0.0
Or see this region's nucleotide sequence