Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04645 and MPMX20_04646 are separated by 87 nucleotides MPMX20_04646 and MPMX20_04647 are separated by 36 nucleotides MPMX20_04647 and MPMX20_04648 are separated by 122 nucleotides
MPMX20_04645: MPMX20_04645 - Adenine permease AdeP, at 4,865,287 to 4,866,627
_04645
MPMX20_04646: MPMX20_04646 - Quinone reductase, at 4,866,715 to 4,867,281
_04646
MPMX20_04647: MPMX20_04647 - hypothetical protein, at 4,867,318 to 4,868,064
_04647
MPMX20_04648: MPMX20_04648 - HTH-type transcriptional regulator YidZ, at 4,868,187 to 4,869,158
_04648
Position (kb)
4867
4868
4869 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4866.380 kb on + strand, within MPMX20_04645 at 4866.398 kb on + strand, within MPMX20_04645 at 4866.398 kb on - strand, within MPMX20_04645 at 4866.406 kb on - strand, within MPMX20_04645 at 4866.406 kb on - strand, within MPMX20_04645 at 4866.472 kb on + strand, within MPMX20_04645 at 4866.472 kb on + strand, within MPMX20_04645 at 4866.505 kb on - strand at 4866.516 kb on - strand at 4866.534 kb on + strand at 4866.534 kb on + strand at 4866.542 kb on - strand at 4866.671 kb on + strand at 4866.681 kb on - strand at 4866.681 kb on - strand at 4866.688 kb on + strand at 4866.719 kb on + strand at 4866.719 kb on - strand at 4866.720 kb on - strand at 4866.776 kb on + strand, within MPMX20_04646 at 4866.815 kb on + strand, within MPMX20_04646 at 4866.823 kb on - strand, within MPMX20_04646 at 4866.823 kb on - strand, within MPMX20_04646 at 4866.878 kb on + strand, within MPMX20_04646 at 4866.946 kb on - strand, within MPMX20_04646 at 4867.001 kb on + strand, within MPMX20_04646 at 4867.011 kb on - strand, within MPMX20_04646 at 4867.089 kb on + strand, within MPMX20_04646 at 4867.089 kb on + strand, within MPMX20_04646 at 4867.089 kb on + strand, within MPMX20_04646 at 4867.089 kb on + strand, within MPMX20_04646 at 4867.091 kb on + strand, within MPMX20_04646 at 4867.097 kb on - strand, within MPMX20_04646 at 4867.097 kb on - strand, within MPMX20_04646 at 4867.097 kb on - strand, within MPMX20_04646 at 4867.109 kb on + strand, within MPMX20_04646 at 4867.133 kb on - strand, within MPMX20_04646 at 4867.174 kb on - strand, within MPMX20_04646 at 4867.193 kb on + strand, within MPMX20_04646 at 4867.252 kb on - strand at 4867.301 kb on + strand at 4867.311 kb on + strand at 4867.334 kb on - strand at 4867.422 kb on - strand, within MPMX20_04647 at 4867.481 kb on + strand, within MPMX20_04647 at 4867.489 kb on - strand, within MPMX20_04647 at 4867.514 kb on + strand, within MPMX20_04647 at 4867.597 kb on + strand, within MPMX20_04647 at 4867.635 kb on + strand, within MPMX20_04647 at 4867.640 kb on + strand, within MPMX20_04647 at 4867.648 kb on - strand, within MPMX20_04647 at 4867.771 kb on + strand, within MPMX20_04647 at 4867.781 kb on + strand, within MPMX20_04647 at 4867.869 kb on - strand, within MPMX20_04647 at 4867.869 kb on - strand, within MPMX20_04647 at 4867.906 kb on - strand, within MPMX20_04647 at 4868.155 kb on + strand at 4868.278 kb on - strand at 4868.283 kb on - strand at 4868.310 kb on + strand, within MPMX20_04648 at 4868.325 kb on + strand, within MPMX20_04648 at 4868.334 kb on + strand, within MPMX20_04648 at 4868.356 kb on - strand, within MPMX20_04648 at 4868.357 kb on + strand, within MPMX20_04648 at 4868.385 kb on + strand, within MPMX20_04648 at 4868.390 kb on - strand, within MPMX20_04648 at 4868.393 kb on - strand, within MPMX20_04648 at 4868.410 kb on + strand, within MPMX20_04648 at 4868.441 kb on + strand, within MPMX20_04648 at 4868.449 kb on - strand, within MPMX20_04648 at 4868.456 kb on + strand, within MPMX20_04648 at 4868.528 kb on + strand, within MPMX20_04648 at 4868.536 kb on - strand, within MPMX20_04648 at 4868.561 kb on - strand, within MPMX20_04648 at 4868.570 kb on + strand, within MPMX20_04648 at 4868.571 kb on + strand, within MPMX20_04648 at 4868.571 kb on + strand, within MPMX20_04648 at 4868.571 kb on + strand, within MPMX20_04648 at 4868.636 kb on + strand, within MPMX20_04648 at 4868.673 kb on - strand, within MPMX20_04648 at 4868.701 kb on - strand, within MPMX20_04648 at 4868.751 kb on + strand, within MPMX20_04648 at 4868.759 kb on - strand, within MPMX20_04648 at 4868.783 kb on + strand, within MPMX20_04648 at 4868.791 kb on - strand, within MPMX20_04648 at 4868.826 kb on - strand, within MPMX20_04648 at 4868.873 kb on - strand, within MPMX20_04648 at 4868.883 kb on - strand, within MPMX20_04648 at 4868.883 kb on - strand, within MPMX20_04648 at 4868.973 kb on - strand, within MPMX20_04648 at 4868.976 kb on + strand, within MPMX20_04648 at 4869.034 kb on + strand, within MPMX20_04648 at 4869.059 kb on + strand, within MPMX20_04648
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037 remove 4,866,380 + MPMX20_04645 0.82 -0.1 4,866,398 + MPMX20_04645 0.83 -0.4 4,866,398 - MPMX20_04645 0.83 -1.6 4,866,406 - MPMX20_04645 0.83 +0.1 4,866,406 - MPMX20_04645 0.83 -0.6 4,866,472 + MPMX20_04645 0.88 -1.0 4,866,472 + MPMX20_04645 0.88 +0.5 4,866,505 - +1.1 4,866,516 - -1.8 4,866,534 + -0.4 4,866,534 + +2.3 4,866,542 - -0.7 4,866,671 + -2.3 4,866,681 - -2.0 4,866,681 - +0.9 4,866,688 + -0.6 4,866,719 + +1.9 4,866,719 - +0.9 4,866,720 - +1.5 4,866,776 + MPMX20_04646 0.11 +0.3 4,866,815 + MPMX20_04646 0.18 -0.1 4,866,823 - MPMX20_04646 0.19 -1.2 4,866,823 - MPMX20_04646 0.19 -0.7 4,866,878 + MPMX20_04646 0.29 -1.4 4,866,946 - MPMX20_04646 0.41 +0.4 4,867,001 + MPMX20_04646 0.50 -1.6 4,867,011 - MPMX20_04646 0.52 -0.7 4,867,089 + MPMX20_04646 0.66 +0.3 4,867,089 + MPMX20_04646 0.66 -1.3 4,867,089 + MPMX20_04646 0.66 -0.4 4,867,089 + MPMX20_04646 0.66 -0.5 4,867,091 + MPMX20_04646 0.66 +1.8 4,867,097 - MPMX20_04646 0.67 +0.3 4,867,097 - MPMX20_04646 0.67 +0.9 4,867,097 - MPMX20_04646 0.67 +0.3 4,867,109 + MPMX20_04646 0.69 -0.8 4,867,133 - MPMX20_04646 0.74 -0.5 4,867,174 - MPMX20_04646 0.81 -1.3 4,867,193 + MPMX20_04646 0.84 -1.1 4,867,252 - +0.1 4,867,301 + -0.2 4,867,311 + -1.2 4,867,334 - -0.6 4,867,422 - MPMX20_04647 0.14 -0.9 4,867,481 + MPMX20_04647 0.22 -1.5 4,867,489 - MPMX20_04647 0.23 -0.3 4,867,514 + MPMX20_04647 0.26 -1.2 4,867,597 + MPMX20_04647 0.37 -1.1 4,867,635 + MPMX20_04647 0.42 +1.9 4,867,640 + MPMX20_04647 0.43 +1.3 4,867,648 - MPMX20_04647 0.44 -0.9 4,867,771 + MPMX20_04647 0.61 -2.3 4,867,781 + MPMX20_04647 0.62 +0.3 4,867,869 - MPMX20_04647 0.74 -0.4 4,867,869 - MPMX20_04647 0.74 -0.7 4,867,906 - MPMX20_04647 0.79 +0.3 4,868,155 + -0.7 4,868,278 - +0.1 4,868,283 - +0.7 4,868,310 + MPMX20_04648 0.13 -0.5 4,868,325 + MPMX20_04648 0.14 +1.9 4,868,334 + MPMX20_04648 0.15 -0.4 4,868,356 - MPMX20_04648 0.17 +1.3 4,868,357 + MPMX20_04648 0.17 -2.2 4,868,385 + MPMX20_04648 0.20 -0.4 4,868,390 - MPMX20_04648 0.21 -0.5 4,868,393 - MPMX20_04648 0.21 -0.4 4,868,410 + MPMX20_04648 0.23 -0.6 4,868,441 + MPMX20_04648 0.26 +0.2 4,868,449 - MPMX20_04648 0.27 -0.3 4,868,456 + MPMX20_04648 0.28 -1.1 4,868,528 + MPMX20_04648 0.35 -0.9 4,868,536 - MPMX20_04648 0.36 -0.0 4,868,561 - MPMX20_04648 0.38 -0.4 4,868,570 + MPMX20_04648 0.39 -0.6 4,868,571 + MPMX20_04648 0.40 -1.1 4,868,571 + MPMX20_04648 0.40 +0.1 4,868,571 + MPMX20_04648 0.40 -1.2 4,868,636 + MPMX20_04648 0.46 -0.2 4,868,673 - MPMX20_04648 0.50 +0.3 4,868,701 - MPMX20_04648 0.53 +0.9 4,868,751 + MPMX20_04648 0.58 -0.7 4,868,759 - MPMX20_04648 0.59 +0.1 4,868,783 + MPMX20_04648 0.61 +0.2 4,868,791 - MPMX20_04648 0.62 +0.3 4,868,826 - MPMX20_04648 0.66 -0.3 4,868,873 - MPMX20_04648 0.71 -0.8 4,868,883 - MPMX20_04648 0.72 +0.3 4,868,883 - MPMX20_04648 0.72 +0.8 4,868,973 - MPMX20_04648 0.81 -0.6 4,868,976 + MPMX20_04648 0.81 +0.4 4,869,034 + MPMX20_04648 0.87 -1.4 4,869,059 + MPMX20_04648 0.90 +0.9
Or see this region's nucleotide sequence