Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04585

Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04583 and MPMX20_04584 overlap by 7 nucleotidesMPMX20_04584 and MPMX20_04585 are separated by 122 nucleotidesMPMX20_04585 and MPMX20_04586 are separated by 34 nucleotides MPMX20_04583: MPMX20_04583 - hypothetical protein, at 4,794,674 to 4,795,555 _04583 MPMX20_04584: MPMX20_04584 - Alpha-D-glucose 1-phosphate phosphatase YihX, at 4,795,549 to 4,796,148 _04584 MPMX20_04585: MPMX20_04585 - HTH-type transcriptional repressor CsqR, at 4,796,271 to 4,797,071 _04585 MPMX20_04586: MPMX20_04586 - Sulfofructose kinase, at 4,797,106 to 4,798,002 _04586 Position (kb) 4796 4797 4798Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 4795.279 kb on + strand, within MPMX20_04583at 4795.284 kb on + strand, within MPMX20_04583at 4795.292 kb on + strand, within MPMX20_04583at 4795.292 kb on - strand, within MPMX20_04583at 4795.292 kb on - strand, within MPMX20_04583at 4795.416 kb on + strand, within MPMX20_04583at 4795.424 kb on - strand, within MPMX20_04583at 4795.442 kb on - strand, within MPMX20_04583at 4795.458 kb on + strand, within MPMX20_04583at 4795.461 kb on + strand, within MPMX20_04583at 4795.466 kb on + strand, within MPMX20_04583at 4795.471 kb on + strandat 4795.492 kb on - strandat 4795.506 kb on - strandat 4795.506 kb on - strandat 4795.517 kb on + strandat 4795.521 kb on - strandat 4795.581 kb on - strandat 4795.595 kb on - strandat 4795.623 kb on + strand, within MPMX20_04584at 4795.657 kb on + strand, within MPMX20_04584at 4795.724 kb on + strand, within MPMX20_04584at 4795.766 kb on + strand, within MPMX20_04584at 4795.779 kb on + strand, within MPMX20_04584at 4795.791 kb on + strand, within MPMX20_04584at 4795.836 kb on + strand, within MPMX20_04584at 4795.884 kb on + strand, within MPMX20_04584at 4795.884 kb on + strand, within MPMX20_04584at 4795.910 kb on + strand, within MPMX20_04584at 4796.013 kb on + strand, within MPMX20_04584at 4796.013 kb on + strand, within MPMX20_04584at 4796.021 kb on - strand, within MPMX20_04584at 4796.028 kb on - strand, within MPMX20_04584at 4796.067 kb on + strand, within MPMX20_04584at 4796.201 kb on - strandat 4796.214 kb on + strandat 4796.268 kb on + strandat 4796.268 kb on + strandat 4796.268 kb on + strandat 4796.268 kb on + strandat 4796.268 kb on + strandat 4796.268 kb on + strandat 4796.276 kb on - strandat 4796.276 kb on - strandat 4796.319 kb on - strandat 4796.350 kb on + strandat 4796.350 kb on + strandat 4796.498 kb on - strand, within MPMX20_04585at 4796.498 kb on - strand, within MPMX20_04585at 4796.503 kb on - strand, within MPMX20_04585at 4796.509 kb on - strand, within MPMX20_04585at 4796.556 kb on - strand, within MPMX20_04585at 4796.614 kb on - strand, within MPMX20_04585at 4796.635 kb on - strand, within MPMX20_04585at 4796.702 kb on - strand, within MPMX20_04585at 4796.706 kb on + strand, within MPMX20_04585at 4796.860 kb on - strand, within MPMX20_04585at 4796.881 kb on + strand, within MPMX20_04585at 4796.917 kb on - strand, within MPMX20_04585at 4796.957 kb on + strand, within MPMX20_04585at 4796.975 kb on - strand, within MPMX20_04585at 4797.026 kb on + strandat 4797.064 kb on - strandat 4797.067 kb on + strandat 4797.069 kb on + strandat 4797.075 kb on - strandat 4797.133 kb on + strandat 4797.133 kb on + strandat 4797.210 kb on - strand, within MPMX20_04586at 4797.235 kb on - strand, within MPMX20_04586at 4797.369 kb on - strand, within MPMX20_04586at 4797.443 kb on - strand, within MPMX20_04586at 4797.460 kb on + strand, within MPMX20_04586at 4797.485 kb on - strand, within MPMX20_04586at 4797.524 kb on - strand, within MPMX20_04586at 4797.529 kb on - strand, within MPMX20_04586at 4797.578 kb on - strand, within MPMX20_04586at 4797.632 kb on + strand, within MPMX20_04586at 4797.641 kb on - strand, within MPMX20_04586at 4797.701 kb on - strand, within MPMX20_04586at 4797.711 kb on + strand, within MPMX20_04586at 4797.737 kb on + strand, within MPMX20_04586at 4797.778 kb on + strand, within MPMX20_04586at 4797.803 kb on - strand, within MPMX20_04586at 4797.897 kb on + strand, within MPMX20_04586at 4797.972 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
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4,795,279 + MPMX20_04583 0.69 +1.1
4,795,284 + MPMX20_04583 0.69 -0.6
4,795,292 + MPMX20_04583 0.70 -1.0
4,795,292 - MPMX20_04583 0.70 +0.9
4,795,292 - MPMX20_04583 0.70 +0.6
4,795,416 + MPMX20_04583 0.84 +0.9
4,795,424 - MPMX20_04583 0.85 -1.1
4,795,442 - MPMX20_04583 0.87 +0.6
4,795,458 + MPMX20_04583 0.89 -0.2
4,795,461 + MPMX20_04583 0.89 +0.0
4,795,466 + MPMX20_04583 0.90 +0.4
4,795,471 + +0.4
4,795,492 - -0.4
4,795,506 - +0.0
4,795,506 - -0.9
4,795,517 + -1.1
4,795,521 - +0.1
4,795,581 - +0.1
4,795,595 - +0.6
4,795,623 + MPMX20_04584 0.12 -0.6
4,795,657 + MPMX20_04584 0.18 -0.4
4,795,724 + MPMX20_04584 0.29 -2.3
4,795,766 + MPMX20_04584 0.36 +0.3
4,795,779 + MPMX20_04584 0.38 +1.9
4,795,791 + MPMX20_04584 0.40 -2.1
4,795,836 + MPMX20_04584 0.48 +0.6
4,795,884 + MPMX20_04584 0.56 +0.7
4,795,884 + MPMX20_04584 0.56 +0.3
4,795,910 + MPMX20_04584 0.60 +0.1
4,796,013 + MPMX20_04584 0.77 +3.9
4,796,013 + MPMX20_04584 0.77 +0.3
4,796,021 - MPMX20_04584 0.79 -0.1
4,796,028 - MPMX20_04584 0.80 -0.1
4,796,067 + MPMX20_04584 0.86 -1.2
4,796,201 - +1.6
4,796,214 + +1.9
4,796,268 + -0.5
4,796,268 + -0.9
4,796,268 + -0.1
4,796,268 + -0.6
4,796,268 + +0.3
4,796,268 + +0.3
4,796,276 - -0.4
4,796,276 - +1.9
4,796,319 - -2.1
4,796,350 + -2.6
4,796,350 + +0.9
4,796,498 - MPMX20_04585 0.28 -1.4
4,796,498 - MPMX20_04585 0.28 +1.9
4,796,503 - MPMX20_04585 0.29 -0.8
4,796,509 - MPMX20_04585 0.30 -2.2
4,796,556 - MPMX20_04585 0.36 +1.9
4,796,614 - MPMX20_04585 0.43 +0.3
4,796,635 - MPMX20_04585 0.45 +0.9
4,796,702 - MPMX20_04585 0.54 -2.6
4,796,706 + MPMX20_04585 0.54 -1.2
4,796,860 - MPMX20_04585 0.74 -1.3
4,796,881 + MPMX20_04585 0.76 +1.9
4,796,917 - MPMX20_04585 0.81 -1.0
4,796,957 + MPMX20_04585 0.86 -0.1
4,796,975 - MPMX20_04585 0.88 +0.3
4,797,026 + +0.3
4,797,064 - +1.3
4,797,067 + -1.7
4,797,069 + -1.6
4,797,075 - -2.8
4,797,133 + +1.9
4,797,133 + +0.6
4,797,210 - MPMX20_04586 0.12 +0.6
4,797,235 - MPMX20_04586 0.14 +0.2
4,797,369 - MPMX20_04586 0.29 +0.3
4,797,443 - MPMX20_04586 0.38 -0.0
4,797,460 + MPMX20_04586 0.39 -1.3
4,797,485 - MPMX20_04586 0.42 +0.1
4,797,524 - MPMX20_04586 0.47 +1.1
4,797,529 - MPMX20_04586 0.47 -1.1
4,797,578 - MPMX20_04586 0.53 -0.2
4,797,632 + MPMX20_04586 0.59 -0.6
4,797,641 - MPMX20_04586 0.60 +0.1
4,797,701 - MPMX20_04586 0.66 -1.4
4,797,711 + MPMX20_04586 0.67 +0.6
4,797,737 + MPMX20_04586 0.70 +0.3
4,797,778 + MPMX20_04586 0.75 -1.8
4,797,803 - MPMX20_04586 0.78 +0.6
4,797,897 + MPMX20_04586 0.88 +1.3
4,797,972 + +0.5

Or see this region's nucleotide sequence