Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04112 and MPMX20_04113 are separated by 38 nucleotides MPMX20_04113 and MPMX20_04114 overlap by 4 nucleotides MPMX20_04114 and MPMX20_04115 are separated by 227 nucleotides
MPMX20_04112: MPMX20_04112 - Phosphocarrier protein NPr, at 4,304,067 to 4,304,339
_04112
MPMX20_04113: MPMX20_04113 - Biosynthetic peptidoglycan transglycosylase, at 4,304,378 to 4,305,103
_04113
MPMX20_04114: MPMX20_04114 - Glyoxalase ElbB, at 4,305,100 to 4,305,756
_04114
MPMX20_04115: MPMX20_04115 - Aerobic respiration control sensor protein ArcB, at 4,305,984 to 4,308,317
_04115
Position (kb)
4305
4306 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4304.166 kb on + strand, within MPMX20_04112 at 4304.217 kb on - strand, within MPMX20_04112 at 4304.320 kb on - strand at 4304.320 kb on - strand at 4304.320 kb on - strand at 4304.355 kb on + strand at 4304.360 kb on + strand at 4304.360 kb on + strand at 4304.368 kb on - strand at 4304.368 kb on - strand at 4304.412 kb on + strand at 4304.465 kb on + strand, within MPMX20_04113 at 4304.471 kb on + strand, within MPMX20_04113 at 4304.473 kb on - strand, within MPMX20_04113 at 4304.481 kb on + strand, within MPMX20_04113 at 4304.694 kb on + strand, within MPMX20_04113 at 4304.713 kb on - strand, within MPMX20_04113 at 4304.837 kb on - strand, within MPMX20_04113 at 4304.891 kb on + strand, within MPMX20_04113 at 4304.891 kb on + strand, within MPMX20_04113 at 4304.899 kb on - strand, within MPMX20_04113 at 4304.906 kb on + strand, within MPMX20_04113 at 4304.909 kb on - strand, within MPMX20_04113 at 4304.909 kb on - strand, within MPMX20_04113 at 4304.910 kb on - strand, within MPMX20_04113 at 4305.024 kb on + strand, within MPMX20_04113 at 4305.024 kb on + strand, within MPMX20_04113 at 4305.032 kb on - strand at 4305.223 kb on + strand, within MPMX20_04114 at 4305.231 kb on - strand, within MPMX20_04114 at 4305.259 kb on - strand, within MPMX20_04114 at 4305.276 kb on - strand, within MPMX20_04114 at 4305.350 kb on - strand, within MPMX20_04114 at 4305.352 kb on + strand, within MPMX20_04114 at 4305.359 kb on - strand, within MPMX20_04114 at 4305.368 kb on - strand, within MPMX20_04114 at 4305.388 kb on - strand, within MPMX20_04114 at 4305.390 kb on + strand, within MPMX20_04114 at 4305.465 kb on + strand, within MPMX20_04114 at 4305.465 kb on + strand, within MPMX20_04114 at 4305.473 kb on - strand, within MPMX20_04114 at 4305.473 kb on - strand, within MPMX20_04114 at 4305.475 kb on + strand, within MPMX20_04114 at 4305.506 kb on - strand, within MPMX20_04114 at 4305.554 kb on + strand, within MPMX20_04114 at 4305.562 kb on - strand, within MPMX20_04114 at 4305.659 kb on + strand, within MPMX20_04114 at 4305.707 kb on - strand at 4305.725 kb on - strand at 4305.814 kb on + strand at 4305.814 kb on + strand at 4305.822 kb on + strand at 4305.822 kb on - strand at 4305.830 kb on - strand at 4305.830 kb on - strand at 4305.964 kb on - strand at 4306.002 kb on + strand at 4306.002 kb on + strand at 4306.010 kb on - strand at 4306.087 kb on + strand at 4306.099 kb on + strand at 4306.164 kb on - strand at 4306.277 kb on + strand, within MPMX20_04115 at 4306.329 kb on + strand, within MPMX20_04115 at 4306.337 kb on - strand, within MPMX20_04115 at 4306.347 kb on + strand, within MPMX20_04115 at 4306.373 kb on - strand, within MPMX20_04115 at 4306.395 kb on - strand, within MPMX20_04115 at 4306.410 kb on + strand, within MPMX20_04115 at 4306.410 kb on + strand, within MPMX20_04115 at 4306.619 kb on + strand, within MPMX20_04115 at 4306.627 kb on - strand, within MPMX20_04115 at 4306.627 kb on - strand, within MPMX20_04115 at 4306.658 kb on + strand, within MPMX20_04115 at 4306.693 kb on - strand, within MPMX20_04115
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037 remove 4,304,166 + MPMX20_04112 0.36 -0.2 4,304,217 - MPMX20_04112 0.55 +0.7 4,304,320 - +0.1 4,304,320 - -0.6 4,304,320 - -0.4 4,304,355 + -1.1 4,304,360 + +1.9 4,304,360 + -0.8 4,304,368 - +0.6 4,304,368 - +0.3 4,304,412 + +0.7 4,304,465 + MPMX20_04113 0.12 +1.3 4,304,471 + MPMX20_04113 0.13 +1.2 4,304,473 - MPMX20_04113 0.13 -1.2 4,304,481 + MPMX20_04113 0.14 +2.3 4,304,694 + MPMX20_04113 0.44 +0.2 4,304,713 - MPMX20_04113 0.46 -0.9 4,304,837 - MPMX20_04113 0.63 -0.4 4,304,891 + MPMX20_04113 0.71 -0.3 4,304,891 + MPMX20_04113 0.71 -0.2 4,304,899 - MPMX20_04113 0.72 -0.1 4,304,906 + MPMX20_04113 0.73 +1.5 4,304,909 - MPMX20_04113 0.73 -1.5 4,304,909 - MPMX20_04113 0.73 +0.3 4,304,910 - MPMX20_04113 0.73 +0.9 4,305,024 + MPMX20_04113 0.89 +0.9 4,305,024 + MPMX20_04113 0.89 -0.4 4,305,032 - -0.3 4,305,223 + MPMX20_04114 0.19 -0.3 4,305,231 - MPMX20_04114 0.20 +0.6 4,305,259 - MPMX20_04114 0.24 -1.1 4,305,276 - MPMX20_04114 0.27 -0.4 4,305,350 - MPMX20_04114 0.38 -1.2 4,305,352 + MPMX20_04114 0.38 +0.6 4,305,359 - MPMX20_04114 0.39 -1.3 4,305,368 - MPMX20_04114 0.41 -0.3 4,305,388 - MPMX20_04114 0.44 +0.6 4,305,390 + MPMX20_04114 0.44 -1.0 4,305,465 + MPMX20_04114 0.56 +1.3 4,305,465 + MPMX20_04114 0.56 -0.8 4,305,473 - MPMX20_04114 0.57 -0.5 4,305,473 - MPMX20_04114 0.57 +0.3 4,305,475 + MPMX20_04114 0.57 -0.6 4,305,506 - MPMX20_04114 0.62 -1.0 4,305,554 + MPMX20_04114 0.69 +0.4 4,305,562 - MPMX20_04114 0.70 -0.8 4,305,659 + MPMX20_04114 0.85 -1.9 4,305,707 - -1.8 4,305,725 - -0.3 4,305,814 + +0.1 4,305,814 + -0.4 4,305,822 + +2.9 4,305,822 - +1.3 4,305,830 - +0.8 4,305,830 - +1.6 4,305,964 - +2.3 4,306,002 + -0.2 4,306,002 + -1.4 4,306,010 - +1.5 4,306,087 + +0.3 4,306,099 + -0.3 4,306,164 - +2.9 4,306,277 + MPMX20_04115 0.13 +0.9 4,306,329 + MPMX20_04115 0.15 +0.7 4,306,337 - MPMX20_04115 0.15 -1.2 4,306,347 + MPMX20_04115 0.16 -2.2 4,306,373 - MPMX20_04115 0.17 +3.5 4,306,395 - MPMX20_04115 0.18 -0.9 4,306,410 + MPMX20_04115 0.18 -0.3 4,306,410 + MPMX20_04115 0.18 -0.6 4,306,619 + MPMX20_04115 0.27 -0.0 4,306,627 - MPMX20_04115 0.28 +1.9 4,306,627 - MPMX20_04115 0.28 +1.0 4,306,658 + MPMX20_04115 0.29 +2.9 4,306,693 - MPMX20_04115 0.30 +1.7
Or see this region's nucleotide sequence