Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04114

Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04112 and MPMX20_04113 are separated by 38 nucleotidesMPMX20_04113 and MPMX20_04114 overlap by 4 nucleotidesMPMX20_04114 and MPMX20_04115 are separated by 227 nucleotides MPMX20_04112: MPMX20_04112 - Phosphocarrier protein NPr, at 4,304,067 to 4,304,339 _04112 MPMX20_04113: MPMX20_04113 - Biosynthetic peptidoglycan transglycosylase, at 4,304,378 to 4,305,103 _04113 MPMX20_04114: MPMX20_04114 - Glyoxalase ElbB, at 4,305,100 to 4,305,756 _04114 MPMX20_04115: MPMX20_04115 - Aerobic respiration control sensor protein ArcB, at 4,305,984 to 4,308,317 _04115 Position (kb) 4305 4306Strain fitness (log2 ratio) -2 -1 0 1 2 3at 4304.166 kb on + strand, within MPMX20_04112at 4304.217 kb on - strand, within MPMX20_04112at 4304.320 kb on - strandat 4304.320 kb on - strandat 4304.320 kb on - strandat 4304.355 kb on + strandat 4304.360 kb on + strandat 4304.360 kb on + strandat 4304.368 kb on - strandat 4304.368 kb on - strandat 4304.412 kb on + strandat 4304.465 kb on + strand, within MPMX20_04113at 4304.471 kb on + strand, within MPMX20_04113at 4304.473 kb on - strand, within MPMX20_04113at 4304.481 kb on + strand, within MPMX20_04113at 4304.694 kb on + strand, within MPMX20_04113at 4304.713 kb on - strand, within MPMX20_04113at 4304.837 kb on - strand, within MPMX20_04113at 4304.891 kb on + strand, within MPMX20_04113at 4304.891 kb on + strand, within MPMX20_04113at 4304.899 kb on - strand, within MPMX20_04113at 4304.906 kb on + strand, within MPMX20_04113at 4304.909 kb on - strand, within MPMX20_04113at 4304.909 kb on - strand, within MPMX20_04113at 4304.910 kb on - strand, within MPMX20_04113at 4305.024 kb on + strand, within MPMX20_04113at 4305.024 kb on + strand, within MPMX20_04113at 4305.032 kb on - strandat 4305.223 kb on + strand, within MPMX20_04114at 4305.231 kb on - strand, within MPMX20_04114at 4305.259 kb on - strand, within MPMX20_04114at 4305.276 kb on - strand, within MPMX20_04114at 4305.350 kb on - strand, within MPMX20_04114at 4305.352 kb on + strand, within MPMX20_04114at 4305.359 kb on - strand, within MPMX20_04114at 4305.368 kb on - strand, within MPMX20_04114at 4305.388 kb on - strand, within MPMX20_04114at 4305.390 kb on + strand, within MPMX20_04114at 4305.465 kb on + strand, within MPMX20_04114at 4305.465 kb on + strand, within MPMX20_04114at 4305.473 kb on - strand, within MPMX20_04114at 4305.473 kb on - strand, within MPMX20_04114at 4305.475 kb on + strand, within MPMX20_04114at 4305.506 kb on - strand, within MPMX20_04114at 4305.554 kb on + strand, within MPMX20_04114at 4305.562 kb on - strand, within MPMX20_04114at 4305.659 kb on + strand, within MPMX20_04114at 4305.707 kb on - strandat 4305.725 kb on - strandat 4305.814 kb on + strandat 4305.814 kb on + strandat 4305.822 kb on + strandat 4305.822 kb on - strandat 4305.830 kb on - strandat 4305.830 kb on - strandat 4305.964 kb on - strandat 4306.002 kb on + strandat 4306.002 kb on + strandat 4306.010 kb on - strandat 4306.087 kb on + strandat 4306.099 kb on + strandat 4306.164 kb on - strandat 4306.277 kb on + strand, within MPMX20_04115at 4306.329 kb on + strand, within MPMX20_04115at 4306.337 kb on - strand, within MPMX20_04115at 4306.347 kb on + strand, within MPMX20_04115at 4306.373 kb on - strand, within MPMX20_04115at 4306.395 kb on - strand, within MPMX20_04115at 4306.410 kb on + strand, within MPMX20_04115at 4306.410 kb on + strand, within MPMX20_04115at 4306.619 kb on + strand, within MPMX20_04115at 4306.627 kb on - strand, within MPMX20_04115at 4306.627 kb on - strand, within MPMX20_04115at 4306.658 kb on + strand, within MPMX20_04115at 4306.693 kb on - strand, within MPMX20_04115

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
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4,304,166 + MPMX20_04112 0.36 -0.2
4,304,217 - MPMX20_04112 0.55 +0.7
4,304,320 - +0.1
4,304,320 - -0.6
4,304,320 - -0.4
4,304,355 + -1.1
4,304,360 + +1.9
4,304,360 + -0.8
4,304,368 - +0.6
4,304,368 - +0.3
4,304,412 + +0.7
4,304,465 + MPMX20_04113 0.12 +1.3
4,304,471 + MPMX20_04113 0.13 +1.2
4,304,473 - MPMX20_04113 0.13 -1.2
4,304,481 + MPMX20_04113 0.14 +2.3
4,304,694 + MPMX20_04113 0.44 +0.2
4,304,713 - MPMX20_04113 0.46 -0.9
4,304,837 - MPMX20_04113 0.63 -0.4
4,304,891 + MPMX20_04113 0.71 -0.3
4,304,891 + MPMX20_04113 0.71 -0.2
4,304,899 - MPMX20_04113 0.72 -0.1
4,304,906 + MPMX20_04113 0.73 +1.5
4,304,909 - MPMX20_04113 0.73 -1.5
4,304,909 - MPMX20_04113 0.73 +0.3
4,304,910 - MPMX20_04113 0.73 +0.9
4,305,024 + MPMX20_04113 0.89 +0.9
4,305,024 + MPMX20_04113 0.89 -0.4
4,305,032 - -0.3
4,305,223 + MPMX20_04114 0.19 -0.3
4,305,231 - MPMX20_04114 0.20 +0.6
4,305,259 - MPMX20_04114 0.24 -1.1
4,305,276 - MPMX20_04114 0.27 -0.4
4,305,350 - MPMX20_04114 0.38 -1.2
4,305,352 + MPMX20_04114 0.38 +0.6
4,305,359 - MPMX20_04114 0.39 -1.3
4,305,368 - MPMX20_04114 0.41 -0.3
4,305,388 - MPMX20_04114 0.44 +0.6
4,305,390 + MPMX20_04114 0.44 -1.0
4,305,465 + MPMX20_04114 0.56 +1.3
4,305,465 + MPMX20_04114 0.56 -0.8
4,305,473 - MPMX20_04114 0.57 -0.5
4,305,473 - MPMX20_04114 0.57 +0.3
4,305,475 + MPMX20_04114 0.57 -0.6
4,305,506 - MPMX20_04114 0.62 -1.0
4,305,554 + MPMX20_04114 0.69 +0.4
4,305,562 - MPMX20_04114 0.70 -0.8
4,305,659 + MPMX20_04114 0.85 -1.9
4,305,707 - -1.8
4,305,725 - -0.3
4,305,814 + +0.1
4,305,814 + -0.4
4,305,822 + +2.9
4,305,822 - +1.3
4,305,830 - +0.8
4,305,830 - +1.6
4,305,964 - +2.3
4,306,002 + -0.2
4,306,002 + -1.4
4,306,010 - +1.5
4,306,087 + +0.3
4,306,099 + -0.3
4,306,164 - +2.9
4,306,277 + MPMX20_04115 0.13 +0.9
4,306,329 + MPMX20_04115 0.15 +0.7
4,306,337 - MPMX20_04115 0.15 -1.2
4,306,347 + MPMX20_04115 0.16 -2.2
4,306,373 - MPMX20_04115 0.17 +3.5
4,306,395 - MPMX20_04115 0.18 -0.9
4,306,410 + MPMX20_04115 0.18 -0.3
4,306,410 + MPMX20_04115 0.18 -0.6
4,306,619 + MPMX20_04115 0.27 -0.0
4,306,627 - MPMX20_04115 0.28 +1.9
4,306,627 - MPMX20_04115 0.28 +1.0
4,306,658 + MPMX20_04115 0.29 +2.9
4,306,693 - MPMX20_04115 0.30 +1.7

Or see this region's nucleotide sequence