Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03327 and MPMX20_03328 are separated by 108 nucleotides MPMX20_03328 and MPMX20_03329 are separated by 67 nucleotides
MPMX20_03327: MPMX20_03327 - hypothetical protein, at 3,496,947 to 3,497,990
_03327
MPMX20_03328: MPMX20_03328 - GDP-mannose pyrophosphatase NudK, at 3,498,099 to 3,498,689
_03328
MPMX20_03329: MPMX20_03329 - Ferredoxin--NADP reductase, at 3,498,757 to 3,500,733
_03329
Position (kb)
3498
3499 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3497.110 kb on - strand, within MPMX20_03327 at 3497.189 kb on + strand, within MPMX20_03327 at 3497.189 kb on + strand, within MPMX20_03327 at 3497.189 kb on + strand, within MPMX20_03327 at 3497.189 kb on + strand, within MPMX20_03327 at 3497.189 kb on + strand, within MPMX20_03327 at 3497.189 kb on + strand, within MPMX20_03327 at 3497.189 kb on + strand, within MPMX20_03327 at 3497.197 kb on - strand, within MPMX20_03327 at 3497.197 kb on - strand, within MPMX20_03327 at 3497.197 kb on - strand, within MPMX20_03327 at 3497.197 kb on - strand, within MPMX20_03327 at 3497.197 kb on - strand, within MPMX20_03327 at 3497.197 kb on - strand, within MPMX20_03327 at 3497.197 kb on - strand, within MPMX20_03327 at 3497.197 kb on - strand, within MPMX20_03327 at 3497.197 kb on - strand, within MPMX20_03327 at 3497.248 kb on + strand, within MPMX20_03327 at 3497.338 kb on + strand, within MPMX20_03327 at 3497.370 kb on + strand, within MPMX20_03327 at 3497.388 kb on + strand, within MPMX20_03327 at 3497.425 kb on - strand, within MPMX20_03327 at 3497.503 kb on + strand, within MPMX20_03327 at 3497.526 kb on - strand, within MPMX20_03327 at 3497.569 kb on + strand, within MPMX20_03327 at 3497.595 kb on + strand, within MPMX20_03327 at 3497.595 kb on + strand, within MPMX20_03327 at 3497.595 kb on + strand, within MPMX20_03327 at 3497.603 kb on - strand, within MPMX20_03327 at 3497.703 kb on + strand, within MPMX20_03327 at 3497.797 kb on - strand, within MPMX20_03327 at 3497.923 kb on + strand at 3497.929 kb on + strand at 3497.929 kb on + strand at 3497.937 kb on - strand at 3497.937 kb on - strand at 3497.937 kb on - strand at 3497.937 kb on - strand at 3497.937 kb on - strand at 3497.937 kb on - strand at 3497.937 kb on - strand at 3498.025 kb on + strand at 3498.112 kb on - strand at 3498.168 kb on - strand, within MPMX20_03328 at 3498.174 kb on + strand, within MPMX20_03328 at 3498.328 kb on + strand, within MPMX20_03328 at 3498.328 kb on + strand, within MPMX20_03328 at 3498.328 kb on + strand, within MPMX20_03328 at 3498.336 kb on - strand, within MPMX20_03328 at 3498.336 kb on - strand, within MPMX20_03328 at 3498.365 kb on + strand, within MPMX20_03328 at 3498.399 kb on + strand, within MPMX20_03328 at 3498.469 kb on + strand, within MPMX20_03328 at 3498.487 kb on + strand, within MPMX20_03328 at 3498.495 kb on - strand, within MPMX20_03328 at 3498.495 kb on - strand, within MPMX20_03328 at 3498.495 kb on - strand, within MPMX20_03328 at 3498.495 kb on - strand, within MPMX20_03328 at 3498.506 kb on + strand, within MPMX20_03328 at 3498.506 kb on + strand, within MPMX20_03328 at 3498.514 kb on - strand, within MPMX20_03328 at 3498.534 kb on - strand, within MPMX20_03328 at 3498.561 kb on + strand, within MPMX20_03328 at 3498.561 kb on + strand, within MPMX20_03328 at 3498.561 kb on + strand, within MPMX20_03328 at 3498.561 kb on + strand, within MPMX20_03328 at 3498.561 kb on + strand, within MPMX20_03328 at 3498.561 kb on + strand, within MPMX20_03328 at 3498.569 kb on - strand, within MPMX20_03328 at 3498.569 kb on - strand, within MPMX20_03328 at 3498.569 kb on - strand, within MPMX20_03328 at 3498.569 kb on - strand, within MPMX20_03328 at 3498.569 kb on - strand, within MPMX20_03328 at 3498.587 kb on + strand, within MPMX20_03328 at 3498.632 kb on + strand at 3498.727 kb on - strand at 3498.780 kb on + strand at 3498.788 kb on - strand at 3498.843 kb on + strand at 3498.851 kb on - strand at 3498.866 kb on - strand at 3498.897 kb on + strand at 3498.981 kb on - strand, within MPMX20_03329 at 3499.063 kb on - strand, within MPMX20_03329 at 3499.112 kb on + strand, within MPMX20_03329 at 3499.112 kb on + strand, within MPMX20_03329 at 3499.112 kb on + strand, within MPMX20_03329 at 3499.120 kb on - strand, within MPMX20_03329 at 3499.159 kb on - strand, within MPMX20_03329 at 3499.273 kb on - strand, within MPMX20_03329 at 3499.320 kb on + strand, within MPMX20_03329 at 3499.340 kb on - strand, within MPMX20_03329 at 3499.505 kb on + strand, within MPMX20_03329 at 3499.530 kb on - strand, within MPMX20_03329 at 3499.541 kb on + strand, within MPMX20_03329 at 3499.544 kb on - strand, within MPMX20_03329 at 3499.612 kb on - strand, within MPMX20_03329 at 3499.614 kb on + strand, within MPMX20_03329 at 3499.644 kb on - strand, within MPMX20_03329
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037 remove 3,497,110 - MPMX20_03327 0.16 -1.0 3,497,189 + MPMX20_03327 0.23 +2.3 3,497,189 + MPMX20_03327 0.23 -0.9 3,497,189 + MPMX20_03327 0.23 +1.9 3,497,189 + MPMX20_03327 0.23 +0.8 3,497,189 + MPMX20_03327 0.23 -0.3 3,497,189 + MPMX20_03327 0.23 -1.3 3,497,189 + MPMX20_03327 0.23 -0.1 3,497,197 - MPMX20_03327 0.24 -1.1 3,497,197 - MPMX20_03327 0.24 +1.6 3,497,197 - MPMX20_03327 0.24 +0.1 3,497,197 - MPMX20_03327 0.24 -0.8 3,497,197 - MPMX20_03327 0.24 +0.1 3,497,197 - MPMX20_03327 0.24 -1.2 3,497,197 - MPMX20_03327 0.24 -0.0 3,497,197 - MPMX20_03327 0.24 -0.6 3,497,197 - MPMX20_03327 0.24 -0.4 3,497,248 + MPMX20_03327 0.29 +0.4 3,497,338 + MPMX20_03327 0.37 -0.2 3,497,370 + MPMX20_03327 0.41 -1.5 3,497,388 + MPMX20_03327 0.42 -1.2 3,497,425 - MPMX20_03327 0.46 +0.2 3,497,503 + MPMX20_03327 0.53 -0.4 3,497,526 - MPMX20_03327 0.55 +0.6 3,497,569 + MPMX20_03327 0.60 -1.3 3,497,595 + MPMX20_03327 0.62 -0.7 3,497,595 + MPMX20_03327 0.62 -1.2 3,497,595 + MPMX20_03327 0.62 +0.6 3,497,603 - MPMX20_03327 0.63 +1.9 3,497,703 + MPMX20_03327 0.72 +0.3 3,497,797 - MPMX20_03327 0.81 -0.8 3,497,923 + +0.6 3,497,929 + -1.4 3,497,929 + +0.3 3,497,937 - +0.6 3,497,937 - -0.3 3,497,937 - +0.3 3,497,937 - +0.3 3,497,937 - -1.3 3,497,937 - -1.1 3,497,937 - -0.1 3,498,025 + -0.4 3,498,112 - +1.3 3,498,168 - MPMX20_03328 0.12 +1.1 3,498,174 + MPMX20_03328 0.13 +0.3 3,498,328 + MPMX20_03328 0.39 +0.3 3,498,328 + MPMX20_03328 0.39 +0.8 3,498,328 + MPMX20_03328 0.39 +2.2 3,498,336 - MPMX20_03328 0.40 +1.9 3,498,336 - MPMX20_03328 0.40 +0.3 3,498,365 + MPMX20_03328 0.45 +0.6 3,498,399 + MPMX20_03328 0.51 -0.9 3,498,469 + MPMX20_03328 0.63 +0.8 3,498,487 + MPMX20_03328 0.66 -0.9 3,498,495 - MPMX20_03328 0.67 -1.4 3,498,495 - MPMX20_03328 0.67 -1.2 3,498,495 - MPMX20_03328 0.67 -0.6 3,498,495 - MPMX20_03328 0.67 +0.6 3,498,506 + MPMX20_03328 0.69 +2.6 3,498,506 + MPMX20_03328 0.69 -1.7 3,498,514 - MPMX20_03328 0.70 +0.9 3,498,534 - MPMX20_03328 0.74 +0.1 3,498,561 + MPMX20_03328 0.78 -0.8 3,498,561 + MPMX20_03328 0.78 -0.5 3,498,561 + MPMX20_03328 0.78 +1.3 3,498,561 + MPMX20_03328 0.78 +0.9 3,498,561 + MPMX20_03328 0.78 +0.1 3,498,561 + MPMX20_03328 0.78 -0.6 3,498,569 - MPMX20_03328 0.80 +0.9 3,498,569 - MPMX20_03328 0.80 +3.1 3,498,569 - MPMX20_03328 0.80 +0.3 3,498,569 - MPMX20_03328 0.80 +1.6 3,498,569 - MPMX20_03328 0.80 +0.7 3,498,587 + MPMX20_03328 0.83 -0.0 3,498,632 + +0.5 3,498,727 - -0.1 3,498,780 + +2.9 3,498,788 - -0.4 3,498,843 + -0.9 3,498,851 - +0.1 3,498,866 - -0.4 3,498,897 + -0.4 3,498,981 - MPMX20_03329 0.11 +0.6 3,499,063 - MPMX20_03329 0.15 +0.1 3,499,112 + MPMX20_03329 0.18 +0.4 3,499,112 + MPMX20_03329 0.18 -0.7 3,499,112 + MPMX20_03329 0.18 -1.1 3,499,120 - MPMX20_03329 0.18 -0.2 3,499,159 - MPMX20_03329 0.20 -0.6 3,499,273 - MPMX20_03329 0.26 -0.3 3,499,320 + MPMX20_03329 0.28 -0.5 3,499,340 - MPMX20_03329 0.29 -0.6 3,499,505 + MPMX20_03329 0.38 -0.9 3,499,530 - MPMX20_03329 0.39 +0.7 3,499,541 + MPMX20_03329 0.40 +2.9 3,499,544 - MPMX20_03329 0.40 -0.2 3,499,612 - MPMX20_03329 0.43 +0.2 3,499,614 + MPMX20_03329 0.43 +1.9 3,499,644 - MPMX20_03329 0.45 +0.9
Or see this region's nucleotide sequence