Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03255

Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03254 and MPMX20_03255 are separated by 67 nucleotidesMPMX20_03255 and MPMX20_03256 are separated by 114 nucleotides MPMX20_03254: MPMX20_03254 - USG-1 protein, at 3,423,590 to 3,424,603 _03254 MPMX20_03255: MPMX20_03255 - Erythronate-4-phosphate dehydrogenase, at 3,424,671 to 3,425,807 _03255 MPMX20_03256: MPMX20_03256 - Flagellar regulator flk, at 3,425,922 to 3,426,926 _03256 Position (kb) 3424 3425 3426Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 3423.715 kb on + strand, within MPMX20_03254at 3423.758 kb on - strand, within MPMX20_03254at 3423.885 kb on + strand, within MPMX20_03254at 3424.059 kb on + strand, within MPMX20_03254at 3424.359 kb on - strand, within MPMX20_03254at 3424.416 kb on - strand, within MPMX20_03254at 3424.438 kb on - strand, within MPMX20_03254at 3424.502 kb on + strandat 3424.510 kb on - strandat 3424.512 kb on + strandat 3424.541 kb on + strandat 3424.544 kb on - strandat 3424.546 kb on + strandat 3424.546 kb on + strandat 3424.546 kb on + strandat 3424.547 kb on + strandat 3424.554 kb on - strandat 3424.653 kb on - strandat 3424.900 kb on - strand, within MPMX20_03255at 3424.901 kb on - strand, within MPMX20_03255at 3424.910 kb on + strand, within MPMX20_03255at 3424.910 kb on + strand, within MPMX20_03255at 3425.038 kb on - strand, within MPMX20_03255at 3425.038 kb on - strand, within MPMX20_03255at 3425.067 kb on - strand, within MPMX20_03255at 3425.076 kb on - strand, within MPMX20_03255at 3425.076 kb on - strand, within MPMX20_03255at 3425.083 kb on + strand, within MPMX20_03255at 3425.086 kb on - strand, within MPMX20_03255at 3425.090 kb on + strand, within MPMX20_03255at 3425.091 kb on - strand, within MPMX20_03255at 3425.159 kb on + strand, within MPMX20_03255at 3425.212 kb on + strand, within MPMX20_03255at 3425.226 kb on + strand, within MPMX20_03255at 3425.277 kb on - strand, within MPMX20_03255at 3425.318 kb on + strand, within MPMX20_03255at 3425.379 kb on - strand, within MPMX20_03255at 3425.391 kb on + strand, within MPMX20_03255at 3425.391 kb on + strand, within MPMX20_03255at 3425.463 kb on - strand, within MPMX20_03255at 3425.484 kb on - strand, within MPMX20_03255at 3425.494 kb on - strand, within MPMX20_03255at 3425.501 kb on - strand, within MPMX20_03255at 3425.563 kb on + strand, within MPMX20_03255at 3425.681 kb on + strand, within MPMX20_03255at 3425.703 kb on - strandat 3425.727 kb on + strandat 3425.727 kb on + strandat 3425.735 kb on - strandat 3425.735 kb on - strandat 3425.737 kb on + strandat 3425.737 kb on + strandat 3425.737 kb on + strandat 3425.737 kb on + strandat 3425.737 kb on + strandat 3425.737 kb on + strandat 3425.737 kb on + strandat 3425.737 kb on + strandat 3425.745 kb on - strandat 3425.745 kb on - strandat 3425.745 kb on - strandat 3425.745 kb on - strandat 3425.745 kb on - strandat 3425.745 kb on - strandat 3425.745 kb on - strandat 3425.745 kb on - strandat 3425.745 kb on - strandat 3425.745 kb on - strandat 3425.745 kb on - strandat 3425.745 kb on - strandat 3425.757 kb on + strandat 3425.884 kb on + strandat 3425.896 kb on + strandat 3426.004 kb on + strandat 3426.004 kb on + strandat 3426.021 kb on + strandat 3426.077 kb on + strand, within MPMX20_03256at 3426.123 kb on + strand, within MPMX20_03256at 3426.123 kb on + strand, within MPMX20_03256at 3426.123 kb on + strand, within MPMX20_03256at 3426.131 kb on - strand, within MPMX20_03256at 3426.181 kb on - strand, within MPMX20_03256at 3426.238 kb on - strand, within MPMX20_03256at 3426.306 kb on - strand, within MPMX20_03256at 3426.313 kb on + strand, within MPMX20_03256at 3426.313 kb on + strand, within MPMX20_03256at 3426.321 kb on - strand, within MPMX20_03256at 3426.323 kb on + strand, within MPMX20_03256at 3426.333 kb on + strand, within MPMX20_03256at 3426.415 kb on - strand, within MPMX20_03256at 3426.565 kb on + strand, within MPMX20_03256at 3426.573 kb on - strand, within MPMX20_03256at 3426.601 kb on + strand, within MPMX20_03256at 3426.711 kb on + strand, within MPMX20_03256at 3426.711 kb on + strand, within MPMX20_03256at 3426.719 kb on - strand, within MPMX20_03256at 3426.728 kb on + strand, within MPMX20_03256at 3426.728 kb on + strand, within MPMX20_03256at 3426.729 kb on + strand, within MPMX20_03256at 3426.736 kb on - strand, within MPMX20_03256at 3426.736 kb on - strand, within MPMX20_03256at 3426.807 kb on - strand, within MPMX20_03256

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
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3,423,715 + MPMX20_03254 0.12 +1.9
3,423,758 - MPMX20_03254 0.17 +0.7
3,423,885 + MPMX20_03254 0.29 +4.9
3,424,059 + MPMX20_03254 0.46 +0.1
3,424,359 - MPMX20_03254 0.76 -0.4
3,424,416 - MPMX20_03254 0.81 +0.7
3,424,438 - MPMX20_03254 0.84 +0.4
3,424,502 + +1.3
3,424,510 - -0.9
3,424,512 + -1.9
3,424,541 + +0.9
3,424,544 - -0.4
3,424,546 + -2.0
3,424,546 + +0.9
3,424,546 + -0.3
3,424,547 + +0.3
3,424,554 - -0.5
3,424,653 - +1.2
3,424,900 - MPMX20_03255 0.20 -0.8
3,424,901 - MPMX20_03255 0.20 -0.1
3,424,910 + MPMX20_03255 0.21 -1.5
3,424,910 + MPMX20_03255 0.21 -1.5
3,425,038 - MPMX20_03255 0.32 +0.1
3,425,038 - MPMX20_03255 0.32 -0.0
3,425,067 - MPMX20_03255 0.35 -1.6
3,425,076 - MPMX20_03255 0.36 -0.5
3,425,076 - MPMX20_03255 0.36 -0.8
3,425,083 + MPMX20_03255 0.36 -0.8
3,425,086 - MPMX20_03255 0.36 +1.9
3,425,090 + MPMX20_03255 0.37 -2.2
3,425,091 - MPMX20_03255 0.37 +0.3
3,425,159 + MPMX20_03255 0.43 -1.1
3,425,212 + MPMX20_03255 0.48 -1.9
3,425,226 + MPMX20_03255 0.49 +0.6
3,425,277 - MPMX20_03255 0.53 -0.7
3,425,318 + MPMX20_03255 0.57 -1.3
3,425,379 - MPMX20_03255 0.62 -2.0
3,425,391 + MPMX20_03255 0.63 +0.9
3,425,391 + MPMX20_03255 0.63 -0.3
3,425,463 - MPMX20_03255 0.70 -0.3
3,425,484 - MPMX20_03255 0.72 -1.3
3,425,494 - MPMX20_03255 0.72 -0.4
3,425,501 - MPMX20_03255 0.73 -1.3
3,425,563 + MPMX20_03255 0.78 -0.9
3,425,681 + MPMX20_03255 0.89 +1.9
3,425,703 - -0.3
3,425,727 + +0.1
3,425,727 + +1.3
3,425,735 - +2.6
3,425,735 - -1.4
3,425,737 + -2.1
3,425,737 + +0.5
3,425,737 + -2.2
3,425,737 + -1.7
3,425,737 + -0.7
3,425,737 + -1.2
3,425,737 + +0.8
3,425,737 + -1.3
3,425,745 - +0.1
3,425,745 - -0.8
3,425,745 - -3.2
3,425,745 - -1.0
3,425,745 - +0.1
3,425,745 - +0.6
3,425,745 - -1.1
3,425,745 - +2.6
3,425,745 - +0.0
3,425,745 - +1.7
3,425,745 - +1.7
3,425,745 - -1.7
3,425,757 + -0.2
3,425,884 + +0.3
3,425,896 + -1.3
3,426,004 + +0.1
3,426,004 + -1.1
3,426,021 + -0.9
3,426,077 + MPMX20_03256 0.15 -1.1
3,426,123 + MPMX20_03256 0.20 +1.9
3,426,123 + MPMX20_03256 0.20 +1.3
3,426,123 + MPMX20_03256 0.20 -0.6
3,426,131 - MPMX20_03256 0.21 -0.7
3,426,181 - MPMX20_03256 0.26 -2.7
3,426,238 - MPMX20_03256 0.31 -0.4
3,426,306 - MPMX20_03256 0.38 -1.4
3,426,313 + MPMX20_03256 0.39 +0.7
3,426,313 + MPMX20_03256 0.39 -0.7
3,426,321 - MPMX20_03256 0.40 -0.5
3,426,323 + MPMX20_03256 0.40 +1.6
3,426,333 + MPMX20_03256 0.41 +0.4
3,426,415 - MPMX20_03256 0.49 -0.1
3,426,565 + MPMX20_03256 0.64 +0.1
3,426,573 - MPMX20_03256 0.65 -0.2
3,426,601 + MPMX20_03256 0.68 +0.5
3,426,711 + MPMX20_03256 0.79 -1.3
3,426,711 + MPMX20_03256 0.79 +0.4
3,426,719 - MPMX20_03256 0.79 -1.1
3,426,728 + MPMX20_03256 0.80 +0.9
3,426,728 + MPMX20_03256 0.80 -0.8
3,426,729 + MPMX20_03256 0.80 -1.8
3,426,736 - MPMX20_03256 0.81 -0.1
3,426,736 - MPMX20_03256 0.81 -0.2
3,426,807 - MPMX20_03256 0.88 -1.3

Or see this region's nucleotide sequence