Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03142

Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03141 and MPMX20_03142 are separated by 127 nucleotidesMPMX20_03142 and MPMX20_03143 are separated by 77 nucleotides MPMX20_03141: MPMX20_03141 - Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase, at 3,301,527 to 3,302,096 _03141 MPMX20_03142: MPMX20_03142 - putative cyclic di-GMP phosphodiesterase PdeN, at 3,302,224 to 3,303,765 _03142 MPMX20_03143: MPMX20_03143 - hypothetical protein, at 3,303,843 to 3,305,648 _03143 Position (kb) 3302 3303 3304Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7at 3301.330 kb on + strandat 3301.330 kb on + strandat 3301.343 kb on + strandat 3301.412 kb on + strandat 3301.412 kb on + strandat 3301.420 kb on - strandat 3301.420 kb on - strandat 3301.420 kb on - strandat 3301.425 kb on - strandat 3301.439 kb on - strandat 3301.453 kb on + strandat 3301.506 kb on + strandat 3301.506 kb on + strandat 3301.506 kb on + strandat 3301.529 kb on + strandat 3301.529 kb on + strandat 3301.565 kb on - strandat 3301.566 kb on - strandat 3301.590 kb on + strand, within MPMX20_03141at 3301.590 kb on + strand, within MPMX20_03141at 3301.592 kb on + strand, within MPMX20_03141at 3301.593 kb on - strand, within MPMX20_03141at 3301.595 kb on - strand, within MPMX20_03141at 3301.598 kb on - strand, within MPMX20_03141at 3301.598 kb on - strand, within MPMX20_03141at 3301.598 kb on - strand, within MPMX20_03141at 3301.600 kb on - strand, within MPMX20_03141at 3301.600 kb on - strand, within MPMX20_03141at 3301.600 kb on - strand, within MPMX20_03141at 3301.602 kb on + strand, within MPMX20_03141at 3301.602 kb on + strand, within MPMX20_03141at 3301.610 kb on - strand, within MPMX20_03141at 3301.619 kb on - strand, within MPMX20_03141at 3301.619 kb on - strand, within MPMX20_03141at 3301.628 kb on + strand, within MPMX20_03141at 3301.636 kb on - strand, within MPMX20_03141at 3301.636 kb on - strand, within MPMX20_03141at 3301.669 kb on - strand, within MPMX20_03141at 3301.677 kb on + strand, within MPMX20_03141at 3301.677 kb on + strand, within MPMX20_03141at 3301.677 kb on + strand, within MPMX20_03141at 3301.685 kb on - strand, within MPMX20_03141at 3301.685 kb on - strand, within MPMX20_03141at 3301.692 kb on - strand, within MPMX20_03141at 3301.692 kb on - strand, within MPMX20_03141at 3301.745 kb on + strand, within MPMX20_03141at 3301.746 kb on - strand, within MPMX20_03141at 3301.755 kb on - strand, within MPMX20_03141at 3301.757 kb on + strand, within MPMX20_03141at 3301.764 kb on + strand, within MPMX20_03141at 3301.765 kb on - strand, within MPMX20_03141at 3301.772 kb on - strand, within MPMX20_03141at 3301.779 kb on - strand, within MPMX20_03141at 3301.824 kb on - strand, within MPMX20_03141at 3301.844 kb on + strand, within MPMX20_03141at 3301.849 kb on + strand, within MPMX20_03141at 3301.852 kb on - strand, within MPMX20_03141at 3301.878 kb on + strand, within MPMX20_03141at 3301.911 kb on + strand, within MPMX20_03141at 3301.914 kb on - strand, within MPMX20_03141at 3301.932 kb on + strand, within MPMX20_03141at 3301.932 kb on + strand, within MPMX20_03141at 3301.932 kb on + strand, within MPMX20_03141at 3301.932 kb on + strand, within MPMX20_03141at 3301.935 kb on - strand, within MPMX20_03141at 3301.940 kb on - strand, within MPMX20_03141at 3301.940 kb on - strand, within MPMX20_03141at 3301.965 kb on - strand, within MPMX20_03141at 3301.995 kb on + strand, within MPMX20_03141at 3301.999 kb on - strand, within MPMX20_03141at 3302.036 kb on + strand, within MPMX20_03141at 3302.060 kb on + strandat 3302.079 kb on + strandat 3302.219 kb on + strandat 3302.221 kb on - strandat 3302.224 kb on + strandat 3302.226 kb on - strandat 3302.227 kb on - strandat 3302.281 kb on + strandat 3302.286 kb on + strandat 3302.289 kb on - strandat 3302.298 kb on + strandat 3302.359 kb on - strandat 3302.448 kb on - strand, within MPMX20_03142at 3302.462 kb on + strand, within MPMX20_03142at 3302.465 kb on - strand, within MPMX20_03142at 3302.465 kb on - strand, within MPMX20_03142at 3302.470 kb on - strand, within MPMX20_03142at 3302.485 kb on + strand, within MPMX20_03142at 3302.492 kb on + strand, within MPMX20_03142at 3302.492 kb on + strand, within MPMX20_03142at 3302.493 kb on - strand, within MPMX20_03142at 3302.493 kb on - strand, within MPMX20_03142at 3302.500 kb on - strand, within MPMX20_03142at 3302.500 kb on - strand, within MPMX20_03142at 3302.540 kb on + strand, within MPMX20_03142at 3302.608 kb on - strand, within MPMX20_03142at 3302.742 kb on + strand, within MPMX20_03142at 3302.781 kb on - strand, within MPMX20_03142at 3302.826 kb on + strand, within MPMX20_03142at 3302.834 kb on - strand, within MPMX20_03142at 3302.870 kb on + strand, within MPMX20_03142at 3302.963 kb on - strand, within MPMX20_03142at 3302.963 kb on - strand, within MPMX20_03142at 3302.979 kb on + strand, within MPMX20_03142at 3303.006 kb on + strand, within MPMX20_03142at 3303.120 kb on - strand, within MPMX20_03142at 3303.147 kb on + strand, within MPMX20_03142at 3303.215 kb on + strand, within MPMX20_03142at 3303.246 kb on + strand, within MPMX20_03142at 3303.261 kb on + strand, within MPMX20_03142at 3303.348 kb on - strand, within MPMX20_03142at 3303.498 kb on + strand, within MPMX20_03142at 3303.498 kb on + strand, within MPMX20_03142at 3303.498 kb on + strand, within MPMX20_03142at 3303.498 kb on + strand, within MPMX20_03142at 3303.506 kb on - strand, within MPMX20_03142at 3303.506 kb on - strand, within MPMX20_03142at 3303.506 kb on - strand, within MPMX20_03142at 3303.506 kb on - strand, within MPMX20_03142at 3303.506 kb on - strand, within MPMX20_03142at 3303.506 kb on - strand, within MPMX20_03142at 3303.506 kb on - strand, within MPMX20_03142at 3303.652 kb on - strandat 3303.657 kb on + strandat 3303.803 kb on + strandat 3303.811 kb on - strandat 3303.821 kb on + strandat 3303.821 kb on + strandat 3303.829 kb on - strandat 3303.829 kb on - strandat 3303.872 kb on + strandat 3303.881 kb on - strandat 3303.887 kb on + strandat 3303.895 kb on - strandat 3303.895 kb on - strandat 3303.977 kb on + strandat 3303.985 kb on - strandat 3303.985 kb on - strandat 3304.053 kb on + strand, within MPMX20_03143at 3304.101 kb on - strand, within MPMX20_03143at 3304.124 kb on + strand, within MPMX20_03143at 3304.222 kb on + strand, within MPMX20_03143at 3304.259 kb on - strand, within MPMX20_03143at 3304.310 kb on - strand, within MPMX20_03143at 3304.348 kb on + strand, within MPMX20_03143at 3304.356 kb on - strand, within MPMX20_03143at 3304.356 kb on - strand, within MPMX20_03143at 3304.356 kb on - strand, within MPMX20_03143at 3304.356 kb on - strand, within MPMX20_03143at 3304.356 kb on - strand, within MPMX20_03143at 3304.451 kb on + strand, within MPMX20_03143at 3304.511 kb on - strand, within MPMX20_03143at 3304.519 kb on + strand, within MPMX20_03143at 3304.568 kb on - strand, within MPMX20_03143at 3304.597 kb on + strand, within MPMX20_03143at 3304.671 kb on + strand, within MPMX20_03143at 3304.689 kb on + strand, within MPMX20_03143at 3304.697 kb on - strand, within MPMX20_03143at 3304.717 kb on + strand, within MPMX20_03143at 3304.723 kb on - strand, within MPMX20_03143at 3304.725 kb on - strand, within MPMX20_03143at 3304.725 kb on - strand, within MPMX20_03143at 3304.765 kb on - strand, within MPMX20_03143

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
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3,301,330 + -0.9
3,301,330 + -1.1
3,301,343 + +0.4
3,301,412 + -1.0
3,301,412 + -0.2
3,301,420 - -0.6
3,301,420 - -1.6
3,301,420 - -0.4
3,301,425 - -1.1
3,301,439 - +0.8
3,301,453 + +0.8
3,301,506 + -0.3
3,301,506 + +0.6
3,301,506 + -1.2
3,301,529 + -1.8
3,301,529 + -0.3
3,301,565 - -1.7
3,301,566 - -1.6
3,301,590 + MPMX20_03141 0.11 +0.7
3,301,590 + MPMX20_03141 0.11 +1.8
3,301,592 + MPMX20_03141 0.11 +1.1
3,301,593 - MPMX20_03141 0.12 +0.5
3,301,595 - MPMX20_03141 0.12 +0.0
3,301,598 - MPMX20_03141 0.12 -1.3
3,301,598 - MPMX20_03141 0.12 -2.0
3,301,598 - MPMX20_03141 0.12 -0.7
3,301,600 - MPMX20_03141 0.13 -2.1
3,301,600 - MPMX20_03141 0.13 +0.0
3,301,600 - MPMX20_03141 0.13 -0.9
3,301,602 + MPMX20_03141 0.13 -2.1
3,301,602 + MPMX20_03141 0.13 +1.2
3,301,610 - MPMX20_03141 0.15 -2.1
3,301,619 - MPMX20_03141 0.16 -0.7
3,301,619 - MPMX20_03141 0.16 -1.8
3,301,628 + MPMX20_03141 0.18 +0.0
3,301,636 - MPMX20_03141 0.19 -0.9
3,301,636 - MPMX20_03141 0.19 -0.4
3,301,669 - MPMX20_03141 0.25 -1.6
3,301,677 + MPMX20_03141 0.26 -0.3
3,301,677 + MPMX20_03141 0.26 +0.9
3,301,677 + MPMX20_03141 0.26 -2.7
3,301,685 - MPMX20_03141 0.28 -1.0
3,301,685 - MPMX20_03141 0.28 -1.4
3,301,692 - MPMX20_03141 0.29 +0.3
3,301,692 - MPMX20_03141 0.29 +0.3
3,301,745 + MPMX20_03141 0.38 +0.5
3,301,746 - MPMX20_03141 0.38 +0.3
3,301,755 - MPMX20_03141 0.40 +1.3
3,301,757 + MPMX20_03141 0.40 -1.2
3,301,764 + MPMX20_03141 0.42 -0.5
3,301,765 - MPMX20_03141 0.42 -0.6
3,301,772 - MPMX20_03141 0.43 +1.3
3,301,779 - MPMX20_03141 0.44 -0.7
3,301,824 - MPMX20_03141 0.52 +0.3
3,301,844 + MPMX20_03141 0.56 -2.1
3,301,849 + MPMX20_03141 0.56 -0.9
3,301,852 - MPMX20_03141 0.57 -0.2
3,301,878 + MPMX20_03141 0.62 +1.8
3,301,911 + MPMX20_03141 0.67 -0.5
3,301,914 - MPMX20_03141 0.68 -0.4
3,301,932 + MPMX20_03141 0.71 -0.2
3,301,932 + MPMX20_03141 0.71 -1.6
3,301,932 + MPMX20_03141 0.71 -1.3
3,301,932 + MPMX20_03141 0.71 -0.1
3,301,935 - MPMX20_03141 0.72 -0.2
3,301,940 - MPMX20_03141 0.72 +0.6
3,301,940 - MPMX20_03141 0.72 -0.5
3,301,965 - MPMX20_03141 0.77 -1.8
3,301,995 + MPMX20_03141 0.82 +0.6
3,301,999 - MPMX20_03141 0.83 +1.3
3,302,036 + MPMX20_03141 0.89 +2.0
3,302,060 + -0.4
3,302,079 + -0.0
3,302,219 + +1.3
3,302,221 - -1.1
3,302,224 + +0.3
3,302,226 - -2.6
3,302,227 - -1.2
3,302,281 + +1.3
3,302,286 + +2.5
3,302,289 - +2.3
3,302,298 + -1.4
3,302,359 - +0.3
3,302,448 - MPMX20_03142 0.15 +1.5
3,302,462 + MPMX20_03142 0.15 -2.1
3,302,465 - MPMX20_03142 0.16 +0.1
3,302,465 - MPMX20_03142 0.16 +0.3
3,302,470 - MPMX20_03142 0.16 -0.8
3,302,485 + MPMX20_03142 0.17 -2.0
3,302,492 + MPMX20_03142 0.17 +1.3
3,302,492 + MPMX20_03142 0.17 +1.8
3,302,493 - MPMX20_03142 0.17 +0.6
3,302,493 - MPMX20_03142 0.17 +0.4
3,302,500 - MPMX20_03142 0.18 -0.4
3,302,500 - MPMX20_03142 0.18 -1.6
3,302,540 + MPMX20_03142 0.20 -2.8
3,302,608 - MPMX20_03142 0.25 +1.2
3,302,742 + MPMX20_03142 0.34 +0.3
3,302,781 - MPMX20_03142 0.36 -0.5
3,302,826 + MPMX20_03142 0.39 +0.9
3,302,834 - MPMX20_03142 0.40 -0.6
3,302,870 + MPMX20_03142 0.42 +0.0
3,302,963 - MPMX20_03142 0.48 +0.1
3,302,963 - MPMX20_03142 0.48 +0.7
3,302,979 + MPMX20_03142 0.49 +0.5
3,303,006 + MPMX20_03142 0.51 -2.6
3,303,120 - MPMX20_03142 0.58 -1.3
3,303,147 + MPMX20_03142 0.60 +0.7
3,303,215 + MPMX20_03142 0.64 +2.8
3,303,246 + MPMX20_03142 0.66 -0.7
3,303,261 + MPMX20_03142 0.67 +0.3
3,303,348 - MPMX20_03142 0.73 -0.8
3,303,498 + MPMX20_03142 0.83 -0.3
3,303,498 + MPMX20_03142 0.83 -0.6
3,303,498 + MPMX20_03142 0.83 +3.6
3,303,498 + MPMX20_03142 0.83 +0.5
3,303,506 - MPMX20_03142 0.83 -1.9
3,303,506 - MPMX20_03142 0.83 -2.5
3,303,506 - MPMX20_03142 0.83 -1.1
3,303,506 - MPMX20_03142 0.83 +0.3
3,303,506 - MPMX20_03142 0.83 -0.4
3,303,506 - MPMX20_03142 0.83 +0.8
3,303,506 - MPMX20_03142 0.83 -1.1
3,303,652 - -1.0
3,303,657 + +1.3
3,303,803 + +6.9
3,303,811 - -2.3
3,303,821 + -1.5
3,303,821 + -0.3
3,303,829 - -0.4
3,303,829 - +0.6
3,303,872 + -1.8
3,303,881 - -0.9
3,303,887 + +1.0
3,303,895 - -0.7
3,303,895 - +0.9
3,303,977 + +0.3
3,303,985 - +3.3
3,303,985 - -1.6
3,304,053 + MPMX20_03143 0.12 +1.8
3,304,101 - MPMX20_03143 0.14 -0.8
3,304,124 + MPMX20_03143 0.16 -1.6
3,304,222 + MPMX20_03143 0.21 -1.1
3,304,259 - MPMX20_03143 0.23 -1.5
3,304,310 - MPMX20_03143 0.26 +0.3
3,304,348 + MPMX20_03143 0.28 +0.7
3,304,356 - MPMX20_03143 0.28 +0.7
3,304,356 - MPMX20_03143 0.28 -1.2
3,304,356 - MPMX20_03143 0.28 +0.4
3,304,356 - MPMX20_03143 0.28 -0.7
3,304,356 - MPMX20_03143 0.28 -0.9
3,304,451 + MPMX20_03143 0.34 -2.2
3,304,511 - MPMX20_03143 0.37 -1.2
3,304,519 + MPMX20_03143 0.37 +0.1
3,304,568 - MPMX20_03143 0.40 -0.6
3,304,597 + MPMX20_03143 0.42 +0.6
3,304,671 + MPMX20_03143 0.46 -0.4
3,304,689 + MPMX20_03143 0.47 -1.7
3,304,697 - MPMX20_03143 0.47 -0.1
3,304,717 + MPMX20_03143 0.48 -1.0
3,304,723 - MPMX20_03143 0.49 -0.7
3,304,725 - MPMX20_03143 0.49 -0.7
3,304,725 - MPMX20_03143 0.49 -0.7
3,304,765 - MPMX20_03143 0.51 -1.2

Or see this region's nucleotide sequence