Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03072

Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03071 and MPMX20_03072 are separated by 251 nucleotidesMPMX20_03072 and MPMX20_03073 overlap by 4 nucleotidesMPMX20_03073 and MPMX20_03074 overlap by 4 nucleotides MPMX20_03071: MPMX20_03071 - Fructose-bisphosphate aldolase class 1, at 3,220,732 to 3,221,784 _03071 MPMX20_03072: MPMX20_03072 - Putative nucleoside transporter YegT, at 3,222,036 to 3,223,313 _03072 MPMX20_03073: MPMX20_03073 - hypothetical protein, at 3,223,310 to 3,224,314 _03073 MPMX20_03074: MPMX20_03074 - Ribokinase, at 3,224,311 to 3,225,264 _03074 Position (kb) 3222 3223 3224Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 3221.108 kb on + strand, within MPMX20_03071at 3221.198 kb on - strand, within MPMX20_03071at 3221.224 kb on + strand, within MPMX20_03071at 3221.273 kb on - strand, within MPMX20_03071at 3221.273 kb on - strand, within MPMX20_03071at 3221.273 kb on - strand, within MPMX20_03071at 3221.322 kb on + strand, within MPMX20_03071at 3221.373 kb on - strand, within MPMX20_03071at 3221.420 kb on - strand, within MPMX20_03071at 3221.420 kb on - strand, within MPMX20_03071at 3221.420 kb on - strand, within MPMX20_03071at 3221.420 kb on - strand, within MPMX20_03071at 3221.449 kb on + strand, within MPMX20_03071at 3221.457 kb on + strand, within MPMX20_03071at 3221.464 kb on + strand, within MPMX20_03071at 3221.472 kb on - strand, within MPMX20_03071at 3221.472 kb on - strand, within MPMX20_03071at 3221.534 kb on - strand, within MPMX20_03071at 3221.557 kb on + strand, within MPMX20_03071at 3221.558 kb on - strand, within MPMX20_03071at 3221.609 kb on + strand, within MPMX20_03071at 3221.609 kb on + strand, within MPMX20_03071at 3221.609 kb on + strand, within MPMX20_03071at 3221.609 kb on + strand, within MPMX20_03071at 3221.609 kb on + strand, within MPMX20_03071at 3221.617 kb on - strand, within MPMX20_03071at 3221.617 kb on - strand, within MPMX20_03071at 3221.617 kb on - strand, within MPMX20_03071at 3221.628 kb on - strand, within MPMX20_03071at 3221.678 kb on + strand, within MPMX20_03071at 3221.686 kb on - strandat 3221.780 kb on + strandat 3221.793 kb on + strandat 3221.812 kb on - strandat 3221.851 kb on + strandat 3221.851 kb on + strandat 3221.851 kb on + strandat 3221.851 kb on + strandat 3221.859 kb on - strandat 3221.859 kb on - strandat 3221.859 kb on - strandat 3221.859 kb on - strandat 3221.859 kb on - strandat 3221.859 kb on - strandat 3221.859 kb on - strandat 3221.859 kb on - strandat 3221.859 kb on - strandat 3221.859 kb on - strandat 3221.859 kb on - strandat 3221.862 kb on + strandat 3221.865 kb on - strandat 3221.865 kb on - strandat 3222.006 kb on - strandat 3222.018 kb on - strandat 3222.105 kb on - strandat 3222.105 kb on - strandat 3222.112 kb on + strandat 3222.112 kb on + strandat 3222.112 kb on + strandat 3222.112 kb on + strandat 3222.112 kb on + strandat 3222.112 kb on + strandat 3222.112 kb on + strandat 3222.112 kb on + strandat 3222.120 kb on - strandat 3222.120 kb on - strandat 3222.120 kb on - strandat 3222.120 kb on - strandat 3222.120 kb on - strandat 3222.120 kb on - strandat 3222.120 kb on - strandat 3222.120 kb on - strandat 3222.196 kb on - strand, within MPMX20_03072at 3222.200 kb on + strand, within MPMX20_03072at 3222.224 kb on + strand, within MPMX20_03072at 3222.242 kb on - strand, within MPMX20_03072at 3222.252 kb on + strand, within MPMX20_03072at 3222.260 kb on - strand, within MPMX20_03072at 3222.294 kb on + strand, within MPMX20_03072at 3222.354 kb on - strand, within MPMX20_03072at 3222.354 kb on - strand, within MPMX20_03072at 3222.358 kb on + strand, within MPMX20_03072at 3222.358 kb on + strand, within MPMX20_03072at 3222.366 kb on - strand, within MPMX20_03072at 3222.384 kb on - strand, within MPMX20_03072at 3222.439 kb on + strand, within MPMX20_03072at 3222.454 kb on + strand, within MPMX20_03072at 3222.459 kb on + strand, within MPMX20_03072at 3222.464 kb on + strand, within MPMX20_03072at 3222.467 kb on - strand, within MPMX20_03072at 3222.544 kb on + strand, within MPMX20_03072at 3222.544 kb on + strand, within MPMX20_03072at 3222.552 kb on - strand, within MPMX20_03072at 3222.552 kb on - strand, within MPMX20_03072at 3222.552 kb on - strand, within MPMX20_03072at 3222.552 kb on - strand, within MPMX20_03072at 3222.552 kb on - strand, within MPMX20_03072at 3222.586 kb on - strand, within MPMX20_03072at 3222.631 kb on + strand, within MPMX20_03072at 3222.639 kb on - strand, within MPMX20_03072at 3222.644 kb on + strand, within MPMX20_03072at 3222.685 kb on + strand, within MPMX20_03072at 3222.705 kb on + strand, within MPMX20_03072at 3222.789 kb on - strand, within MPMX20_03072at 3222.789 kb on - strand, within MPMX20_03072at 3222.872 kb on + strand, within MPMX20_03072at 3222.918 kb on + strand, within MPMX20_03072at 3222.936 kb on + strand, within MPMX20_03072at 3222.952 kb on - strand, within MPMX20_03072at 3222.996 kb on + strand, within MPMX20_03072at 3223.004 kb on - strand, within MPMX20_03072at 3223.008 kb on - strand, within MPMX20_03072at 3223.034 kb on - strand, within MPMX20_03072at 3223.053 kb on - strand, within MPMX20_03072at 3223.076 kb on - strand, within MPMX20_03072at 3223.085 kb on + strand, within MPMX20_03072at 3223.085 kb on + strand, within MPMX20_03072at 3223.093 kb on + strand, within MPMX20_03072at 3223.093 kb on - strand, within MPMX20_03072at 3223.132 kb on + strand, within MPMX20_03072at 3223.158 kb on + strand, within MPMX20_03072at 3223.158 kb on + strand, within MPMX20_03072at 3223.158 kb on + strand, within MPMX20_03072at 3223.158 kb on + strand, within MPMX20_03072at 3223.166 kb on - strand, within MPMX20_03072at 3223.166 kb on - strand, within MPMX20_03072at 3223.199 kb on - strandat 3223.271 kb on + strandat 3223.272 kb on + strandat 3223.279 kb on - strandat 3223.342 kb on - strandat 3223.349 kb on + strandat 3223.349 kb on + strandat 3223.349 kb on + strandat 3223.349 kb on + strandat 3223.349 kb on + strandat 3223.349 kb on + strandat 3223.357 kb on - strandat 3223.357 kb on - strandat 3223.357 kb on - strandat 3223.357 kb on - strandat 3223.357 kb on - strandat 3223.357 kb on - strandat 3223.374 kb on + strandat 3223.374 kb on + strandat 3223.453 kb on - strand, within MPMX20_03073at 3223.492 kb on + strand, within MPMX20_03073at 3223.505 kb on - strand, within MPMX20_03073at 3223.574 kb on + strand, within MPMX20_03073at 3223.577 kb on - strand, within MPMX20_03073at 3223.579 kb on + strand, within MPMX20_03073at 3223.582 kb on - strand, within MPMX20_03073at 3223.584 kb on + strand, within MPMX20_03073at 3223.584 kb on + strand, within MPMX20_03073at 3223.584 kb on + strand, within MPMX20_03073at 3223.584 kb on + strand, within MPMX20_03073at 3223.592 kb on - strand, within MPMX20_03073at 3223.592 kb on - strand, within MPMX20_03073at 3223.719 kb on + strand, within MPMX20_03073at 3223.719 kb on + strand, within MPMX20_03073at 3223.727 kb on - strand, within MPMX20_03073at 3223.738 kb on + strand, within MPMX20_03073at 3223.742 kb on - strand, within MPMX20_03073at 3223.773 kb on + strand, within MPMX20_03073at 3223.785 kb on + strand, within MPMX20_03073at 3223.842 kb on + strand, within MPMX20_03073at 3223.842 kb on + strand, within MPMX20_03073at 3223.845 kb on - strand, within MPMX20_03073at 3223.845 kb on - strand, within MPMX20_03073at 3223.855 kb on - strand, within MPMX20_03073at 3223.897 kb on + strand, within MPMX20_03073at 3223.902 kb on + strand, within MPMX20_03073at 3223.902 kb on + strand, within MPMX20_03073at 3223.922 kb on - strand, within MPMX20_03073at 3223.939 kb on + strand, within MPMX20_03073at 3223.947 kb on - strand, within MPMX20_03073at 3224.063 kb on - strand, within MPMX20_03073at 3224.108 kb on - strand, within MPMX20_03073at 3224.184 kb on + strand, within MPMX20_03073at 3224.197 kb on - strand, within MPMX20_03073at 3224.207 kb on - strand, within MPMX20_03073at 3224.241 kb on + strandat 3224.258 kb on - strandat 3224.307 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
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3,221,108 + MPMX20_03071 0.36 +0.4
3,221,198 - MPMX20_03071 0.44 +0.2
3,221,224 + MPMX20_03071 0.47 -0.3
3,221,273 - MPMX20_03071 0.51 -2.5
3,221,273 - MPMX20_03071 0.51 +0.0
3,221,273 - MPMX20_03071 0.51 -0.5
3,221,322 + MPMX20_03071 0.56 +1.2
3,221,373 - MPMX20_03071 0.61 -1.3
3,221,420 - MPMX20_03071 0.65 -0.2
3,221,420 - MPMX20_03071 0.65 -1.3
3,221,420 - MPMX20_03071 0.65 +0.1
3,221,420 - MPMX20_03071 0.65 +0.6
3,221,449 + MPMX20_03071 0.68 +0.4
3,221,457 + MPMX20_03071 0.69 -0.8
3,221,464 + MPMX20_03071 0.70 +1.9
3,221,472 - MPMX20_03071 0.70 +0.0
3,221,472 - MPMX20_03071 0.70 +0.5
3,221,534 - MPMX20_03071 0.76 +1.2
3,221,557 + MPMX20_03071 0.78 -0.5
3,221,558 - MPMX20_03071 0.78 +2.8
3,221,609 + MPMX20_03071 0.83 +0.6
3,221,609 + MPMX20_03071 0.83 +1.8
3,221,609 + MPMX20_03071 0.83 -0.9
3,221,609 + MPMX20_03071 0.83 -0.5
3,221,609 + MPMX20_03071 0.83 +1.2
3,221,617 - MPMX20_03071 0.84 -0.4
3,221,617 - MPMX20_03071 0.84 +0.3
3,221,617 - MPMX20_03071 0.84 +0.6
3,221,628 - MPMX20_03071 0.85 +2.5
3,221,678 + MPMX20_03071 0.90 +2.8
3,221,686 - +1.8
3,221,780 + +0.9
3,221,793 + +0.1
3,221,812 - +0.5
3,221,851 + +0.5
3,221,851 + +0.0
3,221,851 + -1.6
3,221,851 + -0.2
3,221,859 - -0.4
3,221,859 - -0.4
3,221,859 - -0.5
3,221,859 - -1.0
3,221,859 - -1.3
3,221,859 - +1.4
3,221,859 - +0.3
3,221,859 - +1.0
3,221,859 - -0.2
3,221,859 - +1.4
3,221,859 - +1.2
3,221,862 + -1.2
3,221,865 - -1.6
3,221,865 - -0.4
3,222,006 - +0.2
3,222,018 - -0.4
3,222,105 - -0.7
3,222,105 - +0.1
3,222,112 + +1.2
3,222,112 + -2.1
3,222,112 + -0.6
3,222,112 + -0.4
3,222,112 + +1.6
3,222,112 + +0.0
3,222,112 + -0.3
3,222,112 + -0.1
3,222,120 - +0.4
3,222,120 - -0.1
3,222,120 - +0.8
3,222,120 - -0.2
3,222,120 - +0.5
3,222,120 - -0.4
3,222,120 - +0.9
3,222,120 - -0.4
3,222,196 - MPMX20_03072 0.13 -0.5
3,222,200 + MPMX20_03072 0.13 +0.4
3,222,224 + MPMX20_03072 0.15 +0.7
3,222,242 - MPMX20_03072 0.16 +0.0
3,222,252 + MPMX20_03072 0.17 +0.4
3,222,260 - MPMX20_03072 0.18 -0.1
3,222,294 + MPMX20_03072 0.20 +0.6
3,222,354 - MPMX20_03072 0.25 -1.2
3,222,354 - MPMX20_03072 0.25 +0.2
3,222,358 + MPMX20_03072 0.25 +0.7
3,222,358 + MPMX20_03072 0.25 -1.2
3,222,366 - MPMX20_03072 0.26 -0.3
3,222,384 - MPMX20_03072 0.27 +1.8
3,222,439 + MPMX20_03072 0.32 -1.1
3,222,454 + MPMX20_03072 0.33 -1.2
3,222,459 + MPMX20_03072 0.33 -0.1
3,222,464 + MPMX20_03072 0.33 +3.4
3,222,467 - MPMX20_03072 0.34 +0.9
3,222,544 + MPMX20_03072 0.40 -0.7
3,222,544 + MPMX20_03072 0.40 -2.1
3,222,552 - MPMX20_03072 0.40 -1.8
3,222,552 - MPMX20_03072 0.40 -0.6
3,222,552 - MPMX20_03072 0.40 -0.5
3,222,552 - MPMX20_03072 0.40 -0.5
3,222,552 - MPMX20_03072 0.40 +0.1
3,222,586 - MPMX20_03072 0.43 -0.8
3,222,631 + MPMX20_03072 0.47 -0.8
3,222,639 - MPMX20_03072 0.47 -0.4
3,222,644 + MPMX20_03072 0.48 -1.6
3,222,685 + MPMX20_03072 0.51 -0.2
3,222,705 + MPMX20_03072 0.52 +0.6
3,222,789 - MPMX20_03072 0.59 -0.3
3,222,789 - MPMX20_03072 0.59 -0.9
3,222,872 + MPMX20_03072 0.65 -0.5
3,222,918 + MPMX20_03072 0.69 +2.3
3,222,936 + MPMX20_03072 0.70 +1.2
3,222,952 - MPMX20_03072 0.72 +0.4
3,222,996 + MPMX20_03072 0.75 -0.9
3,223,004 - MPMX20_03072 0.76 +0.2
3,223,008 - MPMX20_03072 0.76 +0.8
3,223,034 - MPMX20_03072 0.78 +1.2
3,223,053 - MPMX20_03072 0.80 -1.3
3,223,076 - MPMX20_03072 0.81 -1.8
3,223,085 + MPMX20_03072 0.82 +1.6
3,223,085 + MPMX20_03072 0.82 -0.6
3,223,093 + MPMX20_03072 0.83 +1.2
3,223,093 - MPMX20_03072 0.83 +0.9
3,223,132 + MPMX20_03072 0.86 -0.8
3,223,158 + MPMX20_03072 0.88 -0.4
3,223,158 + MPMX20_03072 0.88 +3.3
3,223,158 + MPMX20_03072 0.88 -1.0
3,223,158 + MPMX20_03072 0.88 -0.0
3,223,166 - MPMX20_03072 0.88 +1.8
3,223,166 - MPMX20_03072 0.88 -0.8
3,223,199 - -0.1
3,223,271 + -0.7
3,223,272 + -0.3
3,223,279 - +0.4
3,223,342 - -1.6
3,223,349 + +0.0
3,223,349 + -0.2
3,223,349 + +1.1
3,223,349 + +0.6
3,223,349 + -0.2
3,223,349 + -0.9
3,223,357 - +0.7
3,223,357 - +1.5
3,223,357 - -0.3
3,223,357 - +1.5
3,223,357 - -0.3
3,223,357 - +0.9
3,223,374 + +0.6
3,223,374 + -0.4
3,223,453 - MPMX20_03073 0.14 -0.5
3,223,492 + MPMX20_03073 0.18 -2.0
3,223,505 - MPMX20_03073 0.19 -0.4
3,223,574 + MPMX20_03073 0.26 -0.2
3,223,577 - MPMX20_03073 0.27 +0.8
3,223,579 + MPMX20_03073 0.27 +2.8
3,223,582 - MPMX20_03073 0.27 +0.7
3,223,584 + MPMX20_03073 0.27 +0.8
3,223,584 + MPMX20_03073 0.27 +0.0
3,223,584 + MPMX20_03073 0.27 -1.3
3,223,584 + MPMX20_03073 0.27 -0.2
3,223,592 - MPMX20_03073 0.28 -0.5
3,223,592 - MPMX20_03073 0.28 +0.2
3,223,719 + MPMX20_03073 0.41 -0.3
3,223,719 + MPMX20_03073 0.41 -0.3
3,223,727 - MPMX20_03073 0.41 +3.4
3,223,738 + MPMX20_03073 0.43 -0.4
3,223,742 - MPMX20_03073 0.43 +1.2
3,223,773 + MPMX20_03073 0.46 -0.4
3,223,785 + MPMX20_03073 0.47 -1.1
3,223,842 + MPMX20_03073 0.53 -0.0
3,223,842 + MPMX20_03073 0.53 -0.1
3,223,845 - MPMX20_03073 0.53 -1.0
3,223,845 - MPMX20_03073 0.53 -1.4
3,223,855 - MPMX20_03073 0.54 -0.2
3,223,897 + MPMX20_03073 0.58 -1.4
3,223,902 + MPMX20_03073 0.59 +0.5
3,223,902 + MPMX20_03073 0.59 +3.8
3,223,922 - MPMX20_03073 0.61 -0.9
3,223,939 + MPMX20_03073 0.63 -1.1
3,223,947 - MPMX20_03073 0.63 +0.5
3,224,063 - MPMX20_03073 0.75 +0.5
3,224,108 - MPMX20_03073 0.79 +1.2
3,224,184 + MPMX20_03073 0.87 -0.5
3,224,197 - MPMX20_03073 0.88 +0.5
3,224,207 - MPMX20_03073 0.89 -1.3
3,224,241 + -0.0
3,224,258 - -0.9
3,224,307 + -0.5

Or see this region's nucleotide sequence