Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03071 and MPMX20_03072 are separated by 251 nucleotides MPMX20_03072 and MPMX20_03073 overlap by 4 nucleotides MPMX20_03073 and MPMX20_03074 overlap by 4 nucleotides
MPMX20_03071: MPMX20_03071 - Fructose-bisphosphate aldolase class 1, at 3,220,732 to 3,221,784
_03071
MPMX20_03072: MPMX20_03072 - Putative nucleoside transporter YegT, at 3,222,036 to 3,223,313
_03072
MPMX20_03073: MPMX20_03073 - hypothetical protein, at 3,223,310 to 3,224,314
_03073
MPMX20_03074: MPMX20_03074 - Ribokinase, at 3,224,311 to 3,225,264
_03074
Position (kb)
3222
3223
3224 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3221.108 kb on + strand, within MPMX20_03071 at 3221.198 kb on - strand, within MPMX20_03071 at 3221.224 kb on + strand, within MPMX20_03071 at 3221.273 kb on - strand, within MPMX20_03071 at 3221.273 kb on - strand, within MPMX20_03071 at 3221.273 kb on - strand, within MPMX20_03071 at 3221.322 kb on + strand, within MPMX20_03071 at 3221.373 kb on - strand, within MPMX20_03071 at 3221.420 kb on - strand, within MPMX20_03071 at 3221.420 kb on - strand, within MPMX20_03071 at 3221.420 kb on - strand, within MPMX20_03071 at 3221.420 kb on - strand, within MPMX20_03071 at 3221.449 kb on + strand, within MPMX20_03071 at 3221.457 kb on + strand, within MPMX20_03071 at 3221.464 kb on + strand, within MPMX20_03071 at 3221.472 kb on - strand, within MPMX20_03071 at 3221.472 kb on - strand, within MPMX20_03071 at 3221.534 kb on - strand, within MPMX20_03071 at 3221.557 kb on + strand, within MPMX20_03071 at 3221.558 kb on - strand, within MPMX20_03071 at 3221.609 kb on + strand, within MPMX20_03071 at 3221.609 kb on + strand, within MPMX20_03071 at 3221.609 kb on + strand, within MPMX20_03071 at 3221.609 kb on + strand, within MPMX20_03071 at 3221.609 kb on + strand, within MPMX20_03071 at 3221.617 kb on - strand, within MPMX20_03071 at 3221.617 kb on - strand, within MPMX20_03071 at 3221.617 kb on - strand, within MPMX20_03071 at 3221.628 kb on - strand, within MPMX20_03071 at 3221.678 kb on + strand, within MPMX20_03071 at 3221.686 kb on - strand at 3221.780 kb on + strand at 3221.793 kb on + strand at 3221.812 kb on - strand at 3221.851 kb on + strand at 3221.851 kb on + strand at 3221.851 kb on + strand at 3221.851 kb on + strand at 3221.859 kb on - strand at 3221.859 kb on - strand at 3221.859 kb on - strand at 3221.859 kb on - strand at 3221.859 kb on - strand at 3221.859 kb on - strand at 3221.859 kb on - strand at 3221.859 kb on - strand at 3221.859 kb on - strand at 3221.859 kb on - strand at 3221.859 kb on - strand at 3221.862 kb on + strand at 3221.865 kb on - strand at 3221.865 kb on - strand at 3222.006 kb on - strand at 3222.018 kb on - strand at 3222.105 kb on - strand at 3222.105 kb on - strand at 3222.112 kb on + strand at 3222.112 kb on + strand at 3222.112 kb on + strand at 3222.112 kb on + strand at 3222.112 kb on + strand at 3222.112 kb on + strand at 3222.112 kb on + strand at 3222.112 kb on + strand at 3222.120 kb on - strand at 3222.120 kb on - strand at 3222.120 kb on - strand at 3222.120 kb on - strand at 3222.120 kb on - strand at 3222.120 kb on - strand at 3222.120 kb on - strand at 3222.120 kb on - strand at 3222.196 kb on - strand, within MPMX20_03072 at 3222.200 kb on + strand, within MPMX20_03072 at 3222.224 kb on + strand, within MPMX20_03072 at 3222.242 kb on - strand, within MPMX20_03072 at 3222.252 kb on + strand, within MPMX20_03072 at 3222.260 kb on - strand, within MPMX20_03072 at 3222.294 kb on + strand, within MPMX20_03072 at 3222.354 kb on - strand, within MPMX20_03072 at 3222.354 kb on - strand, within MPMX20_03072 at 3222.358 kb on + strand, within MPMX20_03072 at 3222.358 kb on + strand, within MPMX20_03072 at 3222.366 kb on - strand, within MPMX20_03072 at 3222.384 kb on - strand, within MPMX20_03072 at 3222.439 kb on + strand, within MPMX20_03072 at 3222.454 kb on + strand, within MPMX20_03072 at 3222.459 kb on + strand, within MPMX20_03072 at 3222.464 kb on + strand, within MPMX20_03072 at 3222.467 kb on - strand, within MPMX20_03072 at 3222.544 kb on + strand, within MPMX20_03072 at 3222.544 kb on + strand, within MPMX20_03072 at 3222.552 kb on - strand, within MPMX20_03072 at 3222.552 kb on - strand, within MPMX20_03072 at 3222.552 kb on - strand, within MPMX20_03072 at 3222.552 kb on - strand, within MPMX20_03072 at 3222.552 kb on - strand, within MPMX20_03072 at 3222.586 kb on - strand, within MPMX20_03072 at 3222.631 kb on + strand, within MPMX20_03072 at 3222.639 kb on - strand, within MPMX20_03072 at 3222.644 kb on + strand, within MPMX20_03072 at 3222.685 kb on + strand, within MPMX20_03072 at 3222.705 kb on + strand, within MPMX20_03072 at 3222.789 kb on - strand, within MPMX20_03072 at 3222.789 kb on - strand, within MPMX20_03072 at 3222.872 kb on + strand, within MPMX20_03072 at 3222.918 kb on + strand, within MPMX20_03072 at 3222.936 kb on + strand, within MPMX20_03072 at 3222.952 kb on - strand, within MPMX20_03072 at 3222.996 kb on + strand, within MPMX20_03072 at 3223.004 kb on - strand, within MPMX20_03072 at 3223.008 kb on - strand, within MPMX20_03072 at 3223.034 kb on - strand, within MPMX20_03072 at 3223.053 kb on - strand, within MPMX20_03072 at 3223.076 kb on - strand, within MPMX20_03072 at 3223.085 kb on + strand, within MPMX20_03072 at 3223.085 kb on + strand, within MPMX20_03072 at 3223.093 kb on + strand, within MPMX20_03072 at 3223.093 kb on - strand, within MPMX20_03072 at 3223.132 kb on + strand, within MPMX20_03072 at 3223.158 kb on + strand, within MPMX20_03072 at 3223.158 kb on + strand, within MPMX20_03072 at 3223.158 kb on + strand, within MPMX20_03072 at 3223.158 kb on + strand, within MPMX20_03072 at 3223.166 kb on - strand, within MPMX20_03072 at 3223.166 kb on - strand, within MPMX20_03072 at 3223.199 kb on - strand at 3223.271 kb on + strand at 3223.272 kb on + strand at 3223.279 kb on - strand at 3223.342 kb on - strand at 3223.349 kb on + strand at 3223.349 kb on + strand at 3223.349 kb on + strand at 3223.349 kb on + strand at 3223.349 kb on + strand at 3223.349 kb on + strand at 3223.357 kb on - strand at 3223.357 kb on - strand at 3223.357 kb on - strand at 3223.357 kb on - strand at 3223.357 kb on - strand at 3223.357 kb on - strand at 3223.374 kb on + strand at 3223.374 kb on + strand at 3223.453 kb on - strand, within MPMX20_03073 at 3223.492 kb on + strand, within MPMX20_03073 at 3223.505 kb on - strand, within MPMX20_03073 at 3223.574 kb on + strand, within MPMX20_03073 at 3223.577 kb on - strand, within MPMX20_03073 at 3223.579 kb on + strand, within MPMX20_03073 at 3223.582 kb on - strand, within MPMX20_03073 at 3223.584 kb on + strand, within MPMX20_03073 at 3223.584 kb on + strand, within MPMX20_03073 at 3223.584 kb on + strand, within MPMX20_03073 at 3223.584 kb on + strand, within MPMX20_03073 at 3223.592 kb on - strand, within MPMX20_03073 at 3223.592 kb on - strand, within MPMX20_03073 at 3223.719 kb on + strand, within MPMX20_03073 at 3223.719 kb on + strand, within MPMX20_03073 at 3223.727 kb on - strand, within MPMX20_03073 at 3223.738 kb on + strand, within MPMX20_03073 at 3223.742 kb on - strand, within MPMX20_03073 at 3223.773 kb on + strand, within MPMX20_03073 at 3223.785 kb on + strand, within MPMX20_03073 at 3223.842 kb on + strand, within MPMX20_03073 at 3223.842 kb on + strand, within MPMX20_03073 at 3223.845 kb on - strand, within MPMX20_03073 at 3223.845 kb on - strand, within MPMX20_03073 at 3223.855 kb on - strand, within MPMX20_03073 at 3223.897 kb on + strand, within MPMX20_03073 at 3223.902 kb on + strand, within MPMX20_03073 at 3223.902 kb on + strand, within MPMX20_03073 at 3223.922 kb on - strand, within MPMX20_03073 at 3223.939 kb on + strand, within MPMX20_03073 at 3223.947 kb on - strand, within MPMX20_03073 at 3224.063 kb on - strand, within MPMX20_03073 at 3224.108 kb on - strand, within MPMX20_03073 at 3224.184 kb on + strand, within MPMX20_03073 at 3224.197 kb on - strand, within MPMX20_03073 at 3224.207 kb on - strand, within MPMX20_03073 at 3224.241 kb on + strand at 3224.258 kb on - strand at 3224.307 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037 remove 3,221,108 + MPMX20_03071 0.36 +0.4 3,221,198 - MPMX20_03071 0.44 +0.2 3,221,224 + MPMX20_03071 0.47 -0.3 3,221,273 - MPMX20_03071 0.51 -2.5 3,221,273 - MPMX20_03071 0.51 +0.0 3,221,273 - MPMX20_03071 0.51 -0.5 3,221,322 + MPMX20_03071 0.56 +1.2 3,221,373 - MPMX20_03071 0.61 -1.3 3,221,420 - MPMX20_03071 0.65 -0.2 3,221,420 - MPMX20_03071 0.65 -1.3 3,221,420 - MPMX20_03071 0.65 +0.1 3,221,420 - MPMX20_03071 0.65 +0.6 3,221,449 + MPMX20_03071 0.68 +0.4 3,221,457 + MPMX20_03071 0.69 -0.8 3,221,464 + MPMX20_03071 0.70 +1.9 3,221,472 - MPMX20_03071 0.70 +0.0 3,221,472 - MPMX20_03071 0.70 +0.5 3,221,534 - MPMX20_03071 0.76 +1.2 3,221,557 + MPMX20_03071 0.78 -0.5 3,221,558 - MPMX20_03071 0.78 +2.8 3,221,609 + MPMX20_03071 0.83 +0.6 3,221,609 + MPMX20_03071 0.83 +1.8 3,221,609 + MPMX20_03071 0.83 -0.9 3,221,609 + MPMX20_03071 0.83 -0.5 3,221,609 + MPMX20_03071 0.83 +1.2 3,221,617 - MPMX20_03071 0.84 -0.4 3,221,617 - MPMX20_03071 0.84 +0.3 3,221,617 - MPMX20_03071 0.84 +0.6 3,221,628 - MPMX20_03071 0.85 +2.5 3,221,678 + MPMX20_03071 0.90 +2.8 3,221,686 - +1.8 3,221,780 + +0.9 3,221,793 + +0.1 3,221,812 - +0.5 3,221,851 + +0.5 3,221,851 + +0.0 3,221,851 + -1.6 3,221,851 + -0.2 3,221,859 - -0.4 3,221,859 - -0.4 3,221,859 - -0.5 3,221,859 - -1.0 3,221,859 - -1.3 3,221,859 - +1.4 3,221,859 - +0.3 3,221,859 - +1.0 3,221,859 - -0.2 3,221,859 - +1.4 3,221,859 - +1.2 3,221,862 + -1.2 3,221,865 - -1.6 3,221,865 - -0.4 3,222,006 - +0.2 3,222,018 - -0.4 3,222,105 - -0.7 3,222,105 - +0.1 3,222,112 + +1.2 3,222,112 + -2.1 3,222,112 + -0.6 3,222,112 + -0.4 3,222,112 + +1.6 3,222,112 + +0.0 3,222,112 + -0.3 3,222,112 + -0.1 3,222,120 - +0.4 3,222,120 - -0.1 3,222,120 - +0.8 3,222,120 - -0.2 3,222,120 - +0.5 3,222,120 - -0.4 3,222,120 - +0.9 3,222,120 - -0.4 3,222,196 - MPMX20_03072 0.13 -0.5 3,222,200 + MPMX20_03072 0.13 +0.4 3,222,224 + MPMX20_03072 0.15 +0.7 3,222,242 - MPMX20_03072 0.16 +0.0 3,222,252 + MPMX20_03072 0.17 +0.4 3,222,260 - MPMX20_03072 0.18 -0.1 3,222,294 + MPMX20_03072 0.20 +0.6 3,222,354 - MPMX20_03072 0.25 -1.2 3,222,354 - MPMX20_03072 0.25 +0.2 3,222,358 + MPMX20_03072 0.25 +0.7 3,222,358 + MPMX20_03072 0.25 -1.2 3,222,366 - MPMX20_03072 0.26 -0.3 3,222,384 - MPMX20_03072 0.27 +1.8 3,222,439 + MPMX20_03072 0.32 -1.1 3,222,454 + MPMX20_03072 0.33 -1.2 3,222,459 + MPMX20_03072 0.33 -0.1 3,222,464 + MPMX20_03072 0.33 +3.4 3,222,467 - MPMX20_03072 0.34 +0.9 3,222,544 + MPMX20_03072 0.40 -0.7 3,222,544 + MPMX20_03072 0.40 -2.1 3,222,552 - MPMX20_03072 0.40 -1.8 3,222,552 - MPMX20_03072 0.40 -0.6 3,222,552 - MPMX20_03072 0.40 -0.5 3,222,552 - MPMX20_03072 0.40 -0.5 3,222,552 - MPMX20_03072 0.40 +0.1 3,222,586 - MPMX20_03072 0.43 -0.8 3,222,631 + MPMX20_03072 0.47 -0.8 3,222,639 - MPMX20_03072 0.47 -0.4 3,222,644 + MPMX20_03072 0.48 -1.6 3,222,685 + MPMX20_03072 0.51 -0.2 3,222,705 + MPMX20_03072 0.52 +0.6 3,222,789 - MPMX20_03072 0.59 -0.3 3,222,789 - MPMX20_03072 0.59 -0.9 3,222,872 + MPMX20_03072 0.65 -0.5 3,222,918 + MPMX20_03072 0.69 +2.3 3,222,936 + MPMX20_03072 0.70 +1.2 3,222,952 - MPMX20_03072 0.72 +0.4 3,222,996 + MPMX20_03072 0.75 -0.9 3,223,004 - MPMX20_03072 0.76 +0.2 3,223,008 - MPMX20_03072 0.76 +0.8 3,223,034 - MPMX20_03072 0.78 +1.2 3,223,053 - MPMX20_03072 0.80 -1.3 3,223,076 - MPMX20_03072 0.81 -1.8 3,223,085 + MPMX20_03072 0.82 +1.6 3,223,085 + MPMX20_03072 0.82 -0.6 3,223,093 + MPMX20_03072 0.83 +1.2 3,223,093 - MPMX20_03072 0.83 +0.9 3,223,132 + MPMX20_03072 0.86 -0.8 3,223,158 + MPMX20_03072 0.88 -0.4 3,223,158 + MPMX20_03072 0.88 +3.3 3,223,158 + MPMX20_03072 0.88 -1.0 3,223,158 + MPMX20_03072 0.88 -0.0 3,223,166 - MPMX20_03072 0.88 +1.8 3,223,166 - MPMX20_03072 0.88 -0.8 3,223,199 - -0.1 3,223,271 + -0.7 3,223,272 + -0.3 3,223,279 - +0.4 3,223,342 - -1.6 3,223,349 + +0.0 3,223,349 + -0.2 3,223,349 + +1.1 3,223,349 + +0.6 3,223,349 + -0.2 3,223,349 + -0.9 3,223,357 - +0.7 3,223,357 - +1.5 3,223,357 - -0.3 3,223,357 - +1.5 3,223,357 - -0.3 3,223,357 - +0.9 3,223,374 + +0.6 3,223,374 + -0.4 3,223,453 - MPMX20_03073 0.14 -0.5 3,223,492 + MPMX20_03073 0.18 -2.0 3,223,505 - MPMX20_03073 0.19 -0.4 3,223,574 + MPMX20_03073 0.26 -0.2 3,223,577 - MPMX20_03073 0.27 +0.8 3,223,579 + MPMX20_03073 0.27 +2.8 3,223,582 - MPMX20_03073 0.27 +0.7 3,223,584 + MPMX20_03073 0.27 +0.8 3,223,584 + MPMX20_03073 0.27 +0.0 3,223,584 + MPMX20_03073 0.27 -1.3 3,223,584 + MPMX20_03073 0.27 -0.2 3,223,592 - MPMX20_03073 0.28 -0.5 3,223,592 - MPMX20_03073 0.28 +0.2 3,223,719 + MPMX20_03073 0.41 -0.3 3,223,719 + MPMX20_03073 0.41 -0.3 3,223,727 - MPMX20_03073 0.41 +3.4 3,223,738 + MPMX20_03073 0.43 -0.4 3,223,742 - MPMX20_03073 0.43 +1.2 3,223,773 + MPMX20_03073 0.46 -0.4 3,223,785 + MPMX20_03073 0.47 -1.1 3,223,842 + MPMX20_03073 0.53 -0.0 3,223,842 + MPMX20_03073 0.53 -0.1 3,223,845 - MPMX20_03073 0.53 -1.0 3,223,845 - MPMX20_03073 0.53 -1.4 3,223,855 - MPMX20_03073 0.54 -0.2 3,223,897 + MPMX20_03073 0.58 -1.4 3,223,902 + MPMX20_03073 0.59 +0.5 3,223,902 + MPMX20_03073 0.59 +3.8 3,223,922 - MPMX20_03073 0.61 -0.9 3,223,939 + MPMX20_03073 0.63 -1.1 3,223,947 - MPMX20_03073 0.63 +0.5 3,224,063 - MPMX20_03073 0.75 +0.5 3,224,108 - MPMX20_03073 0.79 +1.2 3,224,184 + MPMX20_03073 0.87 -0.5 3,224,197 - MPMX20_03073 0.88 +0.5 3,224,207 - MPMX20_03073 0.89 -1.3 3,224,241 + -0.0 3,224,258 - -0.9 3,224,307 + -0.5
Or see this region's nucleotide sequence