Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02884 and MPMX20_02885 are separated by 11 nucleotides MPMX20_02885 and MPMX20_02886 are separated by 3 nucleotides
MPMX20_02884: MPMX20_02884 - hypothetical protein, at 3,035,013 to 3,036,098
_02884
MPMX20_02885: MPMX20_02885 - hypothetical protein, at 3,036,110 to 3,036,541
_02885
MPMX20_02886: MPMX20_02886 - hypothetical protein, at 3,036,545 to 3,037,942
_02886
Position (kb)
3036
3037 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3035.120 kb on - strand at 3035.203 kb on + strand, within MPMX20_02884 at 3035.236 kb on + strand, within MPMX20_02884 at 3035.264 kb on + strand, within MPMX20_02884 at 3035.277 kb on - strand, within MPMX20_02884 at 3035.279 kb on + strand, within MPMX20_02884 at 3035.335 kb on - strand, within MPMX20_02884 at 3035.337 kb on + strand, within MPMX20_02884 at 3035.337 kb on + strand, within MPMX20_02884 at 3035.337 kb on + strand, within MPMX20_02884 at 3035.340 kb on - strand, within MPMX20_02884 at 3035.345 kb on - strand, within MPMX20_02884 at 3035.366 kb on + strand, within MPMX20_02884 at 3035.374 kb on + strand, within MPMX20_02884 at 3035.374 kb on + strand, within MPMX20_02884 at 3035.382 kb on - strand, within MPMX20_02884 at 3035.416 kb on + strand, within MPMX20_02884 at 3035.424 kb on - strand, within MPMX20_02884 at 3035.447 kb on + strand, within MPMX20_02884 at 3035.447 kb on + strand, within MPMX20_02884 at 3035.490 kb on + strand, within MPMX20_02884 at 3035.493 kb on - strand, within MPMX20_02884 at 3035.535 kb on - strand, within MPMX20_02884 at 3035.551 kb on + strand, within MPMX20_02884 at 3035.585 kb on + strand, within MPMX20_02884 at 3035.599 kb on - strand, within MPMX20_02884 at 3035.630 kb on - strand, within MPMX20_02884 at 3035.635 kb on - strand, within MPMX20_02884 at 3035.687 kb on - strand, within MPMX20_02884 at 3035.702 kb on + strand, within MPMX20_02884 at 3035.734 kb on + strand, within MPMX20_02884 at 3035.793 kb on + strand, within MPMX20_02884 at 3035.852 kb on + strand, within MPMX20_02884 at 3035.879 kb on + strand, within MPMX20_02884 at 3035.989 kb on + strand, within MPMX20_02884 at 3035.989 kb on + strand, within MPMX20_02884 at 3035.997 kb on - strand at 3036.046 kb on - strand at 3036.049 kb on + strand at 3036.081 kb on - strand at 3036.103 kb on - strand at 3036.149 kb on + strand at 3036.149 kb on + strand at 3036.157 kb on - strand, within MPMX20_02885 at 3036.190 kb on + strand, within MPMX20_02885 at 3036.204 kb on + strand, within MPMX20_02885 at 3036.227 kb on + strand, within MPMX20_02885 at 3036.227 kb on + strand, within MPMX20_02885 at 3036.227 kb on + strand, within MPMX20_02885 at 3036.227 kb on + strand, within MPMX20_02885 at 3036.227 kb on + strand, within MPMX20_02885 at 3036.235 kb on - strand, within MPMX20_02885 at 3036.235 kb on - strand, within MPMX20_02885 at 3036.287 kb on - strand, within MPMX20_02885 at 3036.315 kb on - strand, within MPMX20_02885 at 3036.315 kb on - strand, within MPMX20_02885 at 3036.480 kb on - strand, within MPMX20_02885 at 3036.607 kb on + strand at 3036.610 kb on - strand at 3036.615 kb on - strand at 3036.615 kb on - strand at 3036.615 kb on - strand at 3036.626 kb on - strand at 3036.626 kb on - strand at 3036.677 kb on + strand at 3036.684 kb on + strand at 3036.760 kb on - strand, within MPMX20_02886 at 3036.767 kb on + strand, within MPMX20_02886 at 3036.825 kb on + strand, within MPMX20_02886 at 3036.826 kb on - strand, within MPMX20_02886 at 3036.964 kb on - strand, within MPMX20_02886 at 3037.083 kb on + strand, within MPMX20_02886 at 3037.091 kb on - strand, within MPMX20_02886 at 3037.141 kb on + strand, within MPMX20_02886 at 3037.149 kb on - strand, within MPMX20_02886 at 3037.149 kb on - strand, within MPMX20_02886 at 3037.304 kb on + strand, within MPMX20_02886 at 3037.337 kb on - strand, within MPMX20_02886 at 3037.350 kb on - strand, within MPMX20_02886 at 3037.368 kb on + strand, within MPMX20_02886 at 3037.435 kb on - strand, within MPMX20_02886 at 3037.517 kb on + strand, within MPMX20_02886 at 3037.536 kb on - strand, within MPMX20_02886
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037 remove 3,035,120 - -3.6 3,035,203 + MPMX20_02884 0.17 -2.0 3,035,236 + MPMX20_02884 0.21 -2.1 3,035,264 + MPMX20_02884 0.23 -2.1 3,035,277 - MPMX20_02884 0.24 -0.8 3,035,279 + MPMX20_02884 0.24 -1.8 3,035,335 - MPMX20_02884 0.30 -3.1 3,035,337 + MPMX20_02884 0.30 -2.6 3,035,337 + MPMX20_02884 0.30 +0.3 3,035,337 + MPMX20_02884 0.30 -0.9 3,035,340 - MPMX20_02884 0.30 +0.7 3,035,345 - MPMX20_02884 0.31 -0.5 3,035,366 + MPMX20_02884 0.33 -2.1 3,035,374 + MPMX20_02884 0.33 -3.2 3,035,374 + MPMX20_02884 0.33 -1.5 3,035,382 - MPMX20_02884 0.34 -1.7 3,035,416 + MPMX20_02884 0.37 -0.8 3,035,424 - MPMX20_02884 0.38 -0.6 3,035,447 + MPMX20_02884 0.40 -0.9 3,035,447 + MPMX20_02884 0.40 -1.1 3,035,490 + MPMX20_02884 0.44 -2.3 3,035,493 - MPMX20_02884 0.44 -2.2 3,035,535 - MPMX20_02884 0.48 -2.1 3,035,551 + MPMX20_02884 0.50 -2.7 3,035,585 + MPMX20_02884 0.53 -1.6 3,035,599 - MPMX20_02884 0.54 -0.8 3,035,630 - MPMX20_02884 0.57 -0.8 3,035,635 - MPMX20_02884 0.57 -1.5 3,035,687 - MPMX20_02884 0.62 -2.8 3,035,702 + MPMX20_02884 0.63 -3.1 3,035,734 + MPMX20_02884 0.66 -2.0 3,035,793 + MPMX20_02884 0.72 -2.5 3,035,852 + MPMX20_02884 0.77 -1.4 3,035,879 + MPMX20_02884 0.80 -0.4 3,035,989 + MPMX20_02884 0.90 -2.0 3,035,989 + MPMX20_02884 0.90 -2.1 3,035,997 - -1.2 3,036,046 - -1.1 3,036,049 + -2.6 3,036,081 - -1.7 3,036,103 - -2.0 3,036,149 + -2.0 3,036,149 + -2.4 3,036,157 - MPMX20_02885 0.11 +0.5 3,036,190 + MPMX20_02885 0.19 -2.0 3,036,204 + MPMX20_02885 0.22 -1.6 3,036,227 + MPMX20_02885 0.27 -1.5 3,036,227 + MPMX20_02885 0.27 -0.1 3,036,227 + MPMX20_02885 0.27 -2.1 3,036,227 + MPMX20_02885 0.27 -2.2 3,036,227 + MPMX20_02885 0.27 -2.2 3,036,235 - MPMX20_02885 0.29 -1.9 3,036,235 - MPMX20_02885 0.29 -0.7 3,036,287 - MPMX20_02885 0.41 -1.3 3,036,315 - MPMX20_02885 0.47 -3.4 3,036,315 - MPMX20_02885 0.47 -2.2 3,036,480 - MPMX20_02885 0.86 -0.3 3,036,607 + -0.5 3,036,610 - -1.3 3,036,615 - -2.2 3,036,615 - -2.0 3,036,615 - +0.0 3,036,626 - -4.0 3,036,626 - -2.2 3,036,677 + -0.7 3,036,684 + -1.9 3,036,760 - MPMX20_02886 0.15 -3.0 3,036,767 + MPMX20_02886 0.16 -1.8 3,036,825 + MPMX20_02886 0.20 -2.4 3,036,826 - MPMX20_02886 0.20 -1.6 3,036,964 - MPMX20_02886 0.30 -0.8 3,037,083 + MPMX20_02886 0.38 -0.5 3,037,091 - MPMX20_02886 0.39 -3.4 3,037,141 + MPMX20_02886 0.43 -1.4 3,037,149 - MPMX20_02886 0.43 -1.7 3,037,149 - MPMX20_02886 0.43 -2.9 3,037,304 + MPMX20_02886 0.54 -0.4 3,037,337 - MPMX20_02886 0.57 -2.5 3,037,350 - MPMX20_02886 0.58 -2.5 3,037,368 + MPMX20_02886 0.59 -2.3 3,037,435 - MPMX20_02886 0.64 -1.7 3,037,517 + MPMX20_02886 0.70 -2.3 3,037,536 - MPMX20_02886 0.71 -2.8
Or see this region's nucleotide sequence