Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02885

Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02884 and MPMX20_02885 are separated by 11 nucleotidesMPMX20_02885 and MPMX20_02886 are separated by 3 nucleotides MPMX20_02884: MPMX20_02884 - hypothetical protein, at 3,035,013 to 3,036,098 _02884 MPMX20_02885: MPMX20_02885 - hypothetical protein, at 3,036,110 to 3,036,541 _02885 MPMX20_02886: MPMX20_02886 - hypothetical protein, at 3,036,545 to 3,037,942 _02886 Position (kb) 3036 3037Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3035.120 kb on - strandat 3035.203 kb on + strand, within MPMX20_02884at 3035.236 kb on + strand, within MPMX20_02884at 3035.264 kb on + strand, within MPMX20_02884at 3035.277 kb on - strand, within MPMX20_02884at 3035.279 kb on + strand, within MPMX20_02884at 3035.335 kb on - strand, within MPMX20_02884at 3035.337 kb on + strand, within MPMX20_02884at 3035.337 kb on + strand, within MPMX20_02884at 3035.337 kb on + strand, within MPMX20_02884at 3035.340 kb on - strand, within MPMX20_02884at 3035.345 kb on - strand, within MPMX20_02884at 3035.366 kb on + strand, within MPMX20_02884at 3035.374 kb on + strand, within MPMX20_02884at 3035.374 kb on + strand, within MPMX20_02884at 3035.382 kb on - strand, within MPMX20_02884at 3035.416 kb on + strand, within MPMX20_02884at 3035.424 kb on - strand, within MPMX20_02884at 3035.447 kb on + strand, within MPMX20_02884at 3035.447 kb on + strand, within MPMX20_02884at 3035.490 kb on + strand, within MPMX20_02884at 3035.493 kb on - strand, within MPMX20_02884at 3035.535 kb on - strand, within MPMX20_02884at 3035.551 kb on + strand, within MPMX20_02884at 3035.585 kb on + strand, within MPMX20_02884at 3035.599 kb on - strand, within MPMX20_02884at 3035.630 kb on - strand, within MPMX20_02884at 3035.635 kb on - strand, within MPMX20_02884at 3035.687 kb on - strand, within MPMX20_02884at 3035.702 kb on + strand, within MPMX20_02884at 3035.734 kb on + strand, within MPMX20_02884at 3035.793 kb on + strand, within MPMX20_02884at 3035.852 kb on + strand, within MPMX20_02884at 3035.879 kb on + strand, within MPMX20_02884at 3035.989 kb on + strand, within MPMX20_02884at 3035.989 kb on + strand, within MPMX20_02884at 3035.997 kb on - strandat 3036.046 kb on - strandat 3036.049 kb on + strandat 3036.081 kb on - strandat 3036.103 kb on - strandat 3036.149 kb on + strandat 3036.149 kb on + strandat 3036.157 kb on - strand, within MPMX20_02885at 3036.190 kb on + strand, within MPMX20_02885at 3036.204 kb on + strand, within MPMX20_02885at 3036.227 kb on + strand, within MPMX20_02885at 3036.227 kb on + strand, within MPMX20_02885at 3036.227 kb on + strand, within MPMX20_02885at 3036.227 kb on + strand, within MPMX20_02885at 3036.227 kb on + strand, within MPMX20_02885at 3036.235 kb on - strand, within MPMX20_02885at 3036.235 kb on - strand, within MPMX20_02885at 3036.287 kb on - strand, within MPMX20_02885at 3036.315 kb on - strand, within MPMX20_02885at 3036.315 kb on - strand, within MPMX20_02885at 3036.480 kb on - strand, within MPMX20_02885at 3036.607 kb on + strandat 3036.610 kb on - strandat 3036.615 kb on - strandat 3036.615 kb on - strandat 3036.615 kb on - strandat 3036.626 kb on - strandat 3036.626 kb on - strandat 3036.677 kb on + strandat 3036.684 kb on + strandat 3036.760 kb on - strand, within MPMX20_02886at 3036.767 kb on + strand, within MPMX20_02886at 3036.825 kb on + strand, within MPMX20_02886at 3036.826 kb on - strand, within MPMX20_02886at 3036.964 kb on - strand, within MPMX20_02886at 3037.083 kb on + strand, within MPMX20_02886at 3037.091 kb on - strand, within MPMX20_02886at 3037.141 kb on + strand, within MPMX20_02886at 3037.149 kb on - strand, within MPMX20_02886at 3037.149 kb on - strand, within MPMX20_02886at 3037.304 kb on + strand, within MPMX20_02886at 3037.337 kb on - strand, within MPMX20_02886at 3037.350 kb on - strand, within MPMX20_02886at 3037.368 kb on + strand, within MPMX20_02886at 3037.435 kb on - strand, within MPMX20_02886at 3037.517 kb on + strand, within MPMX20_02886at 3037.536 kb on - strand, within MPMX20_02886

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
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3,035,120 - -3.6
3,035,203 + MPMX20_02884 0.17 -2.0
3,035,236 + MPMX20_02884 0.21 -2.1
3,035,264 + MPMX20_02884 0.23 -2.1
3,035,277 - MPMX20_02884 0.24 -0.8
3,035,279 + MPMX20_02884 0.24 -1.8
3,035,335 - MPMX20_02884 0.30 -3.1
3,035,337 + MPMX20_02884 0.30 -2.6
3,035,337 + MPMX20_02884 0.30 +0.3
3,035,337 + MPMX20_02884 0.30 -0.9
3,035,340 - MPMX20_02884 0.30 +0.7
3,035,345 - MPMX20_02884 0.31 -0.5
3,035,366 + MPMX20_02884 0.33 -2.1
3,035,374 + MPMX20_02884 0.33 -3.2
3,035,374 + MPMX20_02884 0.33 -1.5
3,035,382 - MPMX20_02884 0.34 -1.7
3,035,416 + MPMX20_02884 0.37 -0.8
3,035,424 - MPMX20_02884 0.38 -0.6
3,035,447 + MPMX20_02884 0.40 -0.9
3,035,447 + MPMX20_02884 0.40 -1.1
3,035,490 + MPMX20_02884 0.44 -2.3
3,035,493 - MPMX20_02884 0.44 -2.2
3,035,535 - MPMX20_02884 0.48 -2.1
3,035,551 + MPMX20_02884 0.50 -2.7
3,035,585 + MPMX20_02884 0.53 -1.6
3,035,599 - MPMX20_02884 0.54 -0.8
3,035,630 - MPMX20_02884 0.57 -0.8
3,035,635 - MPMX20_02884 0.57 -1.5
3,035,687 - MPMX20_02884 0.62 -2.8
3,035,702 + MPMX20_02884 0.63 -3.1
3,035,734 + MPMX20_02884 0.66 -2.0
3,035,793 + MPMX20_02884 0.72 -2.5
3,035,852 + MPMX20_02884 0.77 -1.4
3,035,879 + MPMX20_02884 0.80 -0.4
3,035,989 + MPMX20_02884 0.90 -2.0
3,035,989 + MPMX20_02884 0.90 -2.1
3,035,997 - -1.2
3,036,046 - -1.1
3,036,049 + -2.6
3,036,081 - -1.7
3,036,103 - -2.0
3,036,149 + -2.0
3,036,149 + -2.4
3,036,157 - MPMX20_02885 0.11 +0.5
3,036,190 + MPMX20_02885 0.19 -2.0
3,036,204 + MPMX20_02885 0.22 -1.6
3,036,227 + MPMX20_02885 0.27 -1.5
3,036,227 + MPMX20_02885 0.27 -0.1
3,036,227 + MPMX20_02885 0.27 -2.1
3,036,227 + MPMX20_02885 0.27 -2.2
3,036,227 + MPMX20_02885 0.27 -2.2
3,036,235 - MPMX20_02885 0.29 -1.9
3,036,235 - MPMX20_02885 0.29 -0.7
3,036,287 - MPMX20_02885 0.41 -1.3
3,036,315 - MPMX20_02885 0.47 -3.4
3,036,315 - MPMX20_02885 0.47 -2.2
3,036,480 - MPMX20_02885 0.86 -0.3
3,036,607 + -0.5
3,036,610 - -1.3
3,036,615 - -2.2
3,036,615 - -2.0
3,036,615 - +0.0
3,036,626 - -4.0
3,036,626 - -2.2
3,036,677 + -0.7
3,036,684 + -1.9
3,036,760 - MPMX20_02886 0.15 -3.0
3,036,767 + MPMX20_02886 0.16 -1.8
3,036,825 + MPMX20_02886 0.20 -2.4
3,036,826 - MPMX20_02886 0.20 -1.6
3,036,964 - MPMX20_02886 0.30 -0.8
3,037,083 + MPMX20_02886 0.38 -0.5
3,037,091 - MPMX20_02886 0.39 -3.4
3,037,141 + MPMX20_02886 0.43 -1.4
3,037,149 - MPMX20_02886 0.43 -1.7
3,037,149 - MPMX20_02886 0.43 -2.9
3,037,304 + MPMX20_02886 0.54 -0.4
3,037,337 - MPMX20_02886 0.57 -2.5
3,037,350 - MPMX20_02886 0.58 -2.5
3,037,368 + MPMX20_02886 0.59 -2.3
3,037,435 - MPMX20_02886 0.64 -1.7
3,037,517 + MPMX20_02886 0.70 -2.3
3,037,536 - MPMX20_02886 0.71 -2.8

Or see this region's nucleotide sequence