Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02658 and MPMX20_02659 are separated by 36 nucleotides MPMX20_02659 and MPMX20_02660 are separated by 24 nucleotides
MPMX20_02658: MPMX20_02658 - hypothetical protein, at 2,804,279 to 2,805,745
_02658
MPMX20_02659: MPMX20_02659 - Serine/threonine-protein kinase PknD, at 2,805,782 to 2,807,218
_02659
MPMX20_02660: MPMX20_02660 - Protein ClpV1, at 2,807,243 to 2,809,858
_02660
Position (kb)
2805
2806
2807
2808 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2804.837 kb on + strand, within MPMX20_02658 at 2804.893 kb on + strand, within MPMX20_02658 at 2804.893 kb on + strand, within MPMX20_02658 at 2804.893 kb on + strand, within MPMX20_02658 at 2804.901 kb on - strand, within MPMX20_02658 at 2804.903 kb on + strand, within MPMX20_02658 at 2804.903 kb on + strand, within MPMX20_02658 at 2804.903 kb on + strand, within MPMX20_02658 at 2804.903 kb on + strand, within MPMX20_02658 at 2804.911 kb on - strand, within MPMX20_02658 at 2804.913 kb on + strand, within MPMX20_02658 at 2804.916 kb on - strand, within MPMX20_02658 at 2804.923 kb on - strand, within MPMX20_02658 at 2804.931 kb on - strand, within MPMX20_02658 at 2805.001 kb on - strand, within MPMX20_02658 at 2805.055 kb on - strand, within MPMX20_02658 at 2805.063 kb on - strand, within MPMX20_02658 at 2805.063 kb on - strand, within MPMX20_02658 at 2805.066 kb on + strand, within MPMX20_02658 at 2805.071 kb on - strand, within MPMX20_02658 at 2805.094 kb on - strand, within MPMX20_02658 at 2805.176 kb on - strand, within MPMX20_02658 at 2805.258 kb on + strand, within MPMX20_02658 at 2805.265 kb on - strand, within MPMX20_02658 at 2805.275 kb on - strand, within MPMX20_02658 at 2805.296 kb on - strand, within MPMX20_02658 at 2805.365 kb on + strand, within MPMX20_02658 at 2805.396 kb on - strand, within MPMX20_02658 at 2805.410 kb on + strand, within MPMX20_02658 at 2805.418 kb on - strand, within MPMX20_02658 at 2805.533 kb on - strand, within MPMX20_02658 at 2805.544 kb on + strand, within MPMX20_02658 at 2805.544 kb on + strand, within MPMX20_02658 at 2805.552 kb on - strand, within MPMX20_02658 at 2805.552 kb on - strand, within MPMX20_02658 at 2805.552 kb on - strand, within MPMX20_02658 at 2805.617 kb on - strand at 2805.658 kb on + strand at 2805.777 kb on - strand at 2805.777 kb on - strand at 2805.801 kb on + strand at 2805.801 kb on + strand at 2805.809 kb on - strand at 2805.809 kb on - strand at 2805.809 kb on - strand at 2805.869 kb on - strand at 2805.921 kb on + strand at 2805.929 kb on - strand, within MPMX20_02659 at 2805.969 kb on + strand, within MPMX20_02659 at 2805.969 kb on + strand, within MPMX20_02659 at 2806.031 kb on - strand, within MPMX20_02659 at 2806.099 kb on - strand, within MPMX20_02659 at 2806.163 kb on - strand, within MPMX20_02659 at 2806.199 kb on + strand, within MPMX20_02659 at 2806.230 kb on + strand, within MPMX20_02659 at 2806.262 kb on - strand, within MPMX20_02659 at 2806.404 kb on + strand, within MPMX20_02659 at 2806.430 kb on - strand, within MPMX20_02659 at 2806.461 kb on - strand, within MPMX20_02659 at 2806.530 kb on - strand, within MPMX20_02659 at 2806.676 kb on - strand, within MPMX20_02659 at 2806.702 kb on - strand, within MPMX20_02659 at 2806.763 kb on - strand, within MPMX20_02659 at 2806.764 kb on + strand, within MPMX20_02659 at 2806.764 kb on + strand, within MPMX20_02659 at 2806.772 kb on - strand, within MPMX20_02659 at 2806.791 kb on - strand, within MPMX20_02659 at 2806.793 kb on + strand, within MPMX20_02659 at 2806.793 kb on + strand, within MPMX20_02659 at 2806.801 kb on - strand, within MPMX20_02659 at 2806.854 kb on + strand, within MPMX20_02659 at 2806.854 kb on + strand, within MPMX20_02659 at 2806.926 kb on - strand, within MPMX20_02659 at 2806.967 kb on + strand, within MPMX20_02659 at 2806.975 kb on - strand, within MPMX20_02659 at 2807.011 kb on + strand, within MPMX20_02659 at 2807.011 kb on + strand, within MPMX20_02659 at 2807.060 kb on - strand, within MPMX20_02659 at 2807.070 kb on + strand, within MPMX20_02659 at 2807.103 kb on + strand at 2807.163 kb on - strand at 2807.182 kb on + strand at 2807.191 kb on - strand at 2807.193 kb on + strand at 2807.201 kb on - strand at 2807.201 kb on - strand at 2807.227 kb on - strand at 2807.265 kb on + strand at 2807.275 kb on + strand at 2807.275 kb on + strand at 2807.275 kb on + strand at 2807.275 kb on + strand at 2807.283 kb on - strand at 2807.283 kb on - strand at 2807.295 kb on + strand at 2807.295 kb on + strand at 2807.295 kb on + strand at 2807.303 kb on - strand at 2807.303 kb on - strand at 2807.305 kb on - strand at 2807.350 kb on - strand at 2807.373 kb on + strand at 2807.401 kb on + strand at 2807.401 kb on + strand at 2807.567 kb on + strand, within MPMX20_02660 at 2807.572 kb on - strand, within MPMX20_02660 at 2807.577 kb on + strand, within MPMX20_02660 at 2807.661 kb on + strand, within MPMX20_02660 at 2807.666 kb on + strand, within MPMX20_02660 at 2807.674 kb on - strand, within MPMX20_02660 at 2807.679 kb on - strand, within MPMX20_02660 at 2807.684 kb on - strand, within MPMX20_02660 at 2807.716 kb on + strand, within MPMX20_02660 at 2807.745 kb on + strand, within MPMX20_02660 at 2807.826 kb on - strand, within MPMX20_02660 at 2807.852 kb on + strand, within MPMX20_02660 at 2807.860 kb on - strand, within MPMX20_02660 at 2807.893 kb on - strand, within MPMX20_02660 at 2807.914 kb on - strand, within MPMX20_02660 at 2807.915 kb on + strand, within MPMX20_02660 at 2807.962 kb on + strand, within MPMX20_02660 at 2808.114 kb on + strand, within MPMX20_02660 at 2808.114 kb on + strand, within MPMX20_02660 at 2808.114 kb on - strand, within MPMX20_02660 at 2808.139 kb on + strand, within MPMX20_02660 at 2808.139 kb on + strand, within MPMX20_02660 at 2808.156 kb on + strand, within MPMX20_02660
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037 remove 2,804,837 + MPMX20_02658 0.38 -0.4 2,804,893 + MPMX20_02658 0.42 -0.7 2,804,893 + MPMX20_02658 0.42 +1.6 2,804,893 + MPMX20_02658 0.42 -0.4 2,804,901 - MPMX20_02658 0.42 -1.5 2,804,903 + MPMX20_02658 0.43 +1.9 2,804,903 + MPMX20_02658 0.43 +2.0 2,804,903 + MPMX20_02658 0.43 -2.0 2,804,903 + MPMX20_02658 0.43 -1.6 2,804,911 - MPMX20_02658 0.43 -0.4 2,804,913 + MPMX20_02658 0.43 -2.4 2,804,916 - MPMX20_02658 0.43 +0.2 2,804,923 - MPMX20_02658 0.44 -1.2 2,804,931 - MPMX20_02658 0.44 +1.8 2,805,001 - MPMX20_02658 0.49 -1.3 2,805,055 - MPMX20_02658 0.53 -2.2 2,805,063 - MPMX20_02658 0.53 -2.5 2,805,063 - MPMX20_02658 0.53 -0.6 2,805,066 + MPMX20_02658 0.54 -1.1 2,805,071 - MPMX20_02658 0.54 -1.0 2,805,094 - MPMX20_02658 0.56 -1.5 2,805,176 - MPMX20_02658 0.61 -0.5 2,805,258 + MPMX20_02658 0.67 -1.5 2,805,265 - MPMX20_02658 0.67 -0.9 2,805,275 - MPMX20_02658 0.68 -0.5 2,805,296 - MPMX20_02658 0.69 +1.8 2,805,365 + MPMX20_02658 0.74 -0.6 2,805,396 - MPMX20_02658 0.76 -1.1 2,805,410 + MPMX20_02658 0.77 -0.4 2,805,418 - MPMX20_02658 0.78 +0.1 2,805,533 - MPMX20_02658 0.85 +0.0 2,805,544 + MPMX20_02658 0.86 +0.1 2,805,544 + MPMX20_02658 0.86 +1.2 2,805,552 - MPMX20_02658 0.87 -0.5 2,805,552 - MPMX20_02658 0.87 -2.0 2,805,552 - MPMX20_02658 0.87 -0.2 2,805,617 - +0.7 2,805,658 + +2.2 2,805,777 - +0.4 2,805,777 - +0.4 2,805,801 + +0.8 2,805,801 + +2.9 2,805,809 - +1.1 2,805,809 - -0.9 2,805,809 - -0.7 2,805,869 - -0.5 2,805,921 + -0.6 2,805,929 - MPMX20_02659 0.10 +2.3 2,805,969 + MPMX20_02659 0.13 +1.4 2,805,969 + MPMX20_02659 0.13 +2.6 2,806,031 - MPMX20_02659 0.17 +0.2 2,806,099 - MPMX20_02659 0.22 -0.6 2,806,163 - MPMX20_02659 0.27 +0.3 2,806,199 + MPMX20_02659 0.29 +3.7 2,806,230 + MPMX20_02659 0.31 +1.0 2,806,262 - MPMX20_02659 0.33 -0.2 2,806,404 + MPMX20_02659 0.43 -1.8 2,806,430 - MPMX20_02659 0.45 +0.9 2,806,461 - MPMX20_02659 0.47 +1.0 2,806,530 - MPMX20_02659 0.52 -0.4 2,806,676 - MPMX20_02659 0.62 +0.7 2,806,702 - MPMX20_02659 0.64 +1.0 2,806,763 - MPMX20_02659 0.68 +2.6 2,806,764 + MPMX20_02659 0.68 +1.7 2,806,764 + MPMX20_02659 0.68 +0.1 2,806,772 - MPMX20_02659 0.69 -1.1 2,806,791 - MPMX20_02659 0.70 +2.3 2,806,793 + MPMX20_02659 0.70 -0.6 2,806,793 + MPMX20_02659 0.70 +3.8 2,806,801 - MPMX20_02659 0.71 +0.4 2,806,854 + MPMX20_02659 0.75 -0.6 2,806,854 + MPMX20_02659 0.75 +2.3 2,806,926 - MPMX20_02659 0.80 -0.9 2,806,967 + MPMX20_02659 0.82 +0.3 2,806,975 - MPMX20_02659 0.83 +2.6 2,807,011 + MPMX20_02659 0.86 +1.8 2,807,011 + MPMX20_02659 0.86 +0.6 2,807,060 - MPMX20_02659 0.89 +0.4 2,807,070 + MPMX20_02659 0.90 -0.1 2,807,103 + +2.2 2,807,163 - -0.8 2,807,182 + +1.1 2,807,191 - +1.0 2,807,193 + +0.5 2,807,201 - +2.0 2,807,201 - -0.7 2,807,227 - +0.9 2,807,265 + -0.4 2,807,275 + +0.3 2,807,275 + +1.0 2,807,275 + +0.4 2,807,275 + +1.1 2,807,283 - +1.2 2,807,283 - +0.5 2,807,295 + -0.7 2,807,295 + +1.4 2,807,295 + -2.2 2,807,303 - +0.8 2,807,303 - -0.5 2,807,305 - -2.8 2,807,350 - -0.5 2,807,373 + +0.2 2,807,401 + +1.0 2,807,401 + -0.0 2,807,567 + MPMX20_02660 0.12 -0.4 2,807,572 - MPMX20_02660 0.13 -0.6 2,807,577 + MPMX20_02660 0.13 +0.8 2,807,661 + MPMX20_02660 0.16 -0.8 2,807,666 + MPMX20_02660 0.16 -0.2 2,807,674 - MPMX20_02660 0.16 +0.6 2,807,679 - MPMX20_02660 0.17 -0.9 2,807,684 - MPMX20_02660 0.17 -0.3 2,807,716 + MPMX20_02660 0.18 +0.2 2,807,745 + MPMX20_02660 0.19 +1.6 2,807,826 - MPMX20_02660 0.22 -0.9 2,807,852 + MPMX20_02660 0.23 -0.2 2,807,860 - MPMX20_02660 0.24 +0.6 2,807,893 - MPMX20_02660 0.25 +0.8 2,807,914 - MPMX20_02660 0.26 +0.6 2,807,915 + MPMX20_02660 0.26 -0.1 2,807,962 + MPMX20_02660 0.27 -2.2 2,808,114 + MPMX20_02660 0.33 +1.1 2,808,114 + MPMX20_02660 0.33 +1.5 2,808,114 - MPMX20_02660 0.33 -1.3 2,808,139 + MPMX20_02660 0.34 -0.6 2,808,139 + MPMX20_02660 0.34 +0.6 2,808,156 + MPMX20_02660 0.35 -1.2
Or see this region's nucleotide sequence