Experiment: TSB plate, 1:1 coculture with Bacillus megaterium TBS_037
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02397 and MPMX20_02398 overlap by 17 nucleotides MPMX20_02398 and MPMX20_02399 are separated by 9 nucleotides MPMX20_02399 and MPMX20_02400 are separated by 9 nucleotides MPMX20_02400 and MPMX20_02401 are separated by 14 nucleotides
MPMX20_02397: MPMX20_02397 - Glutamine transport ATP-binding protein GlnQ, at 2,529,128 to 2,529,901
_02397
MPMX20_02398: MPMX20_02398 - hypothetical protein, at 2,529,885 to 2,530,811
_02398
MPMX20_02399: MPMX20_02399 - hypothetical protein, at 2,530,821 to 2,531,330
_02399
MPMX20_02400: MPMX20_02400 - hypothetical protein, at 2,531,340 to 2,532,272
_02400
MPMX20_02401: MPMX20_02401 - Putative monooxygenase MoxC, at 2,532,287 to 2,533,603
_02401
Position (kb)
2530
2531
2532 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2529.877 kb on - strand at 2529.882 kb on - strand at 2529.911 kb on - strand at 2529.914 kb on + strand at 2529.917 kb on - strand at 2529.934 kb on + strand at 2529.997 kb on - strand, within MPMX20_02398 at 2530.002 kb on + strand, within MPMX20_02398 at 2530.004 kb on + strand, within MPMX20_02398 at 2530.010 kb on - strand, within MPMX20_02398 at 2530.036 kb on - strand, within MPMX20_02398 at 2530.048 kb on - strand, within MPMX20_02398 at 2530.095 kb on + strand, within MPMX20_02398 at 2530.095 kb on + strand, within MPMX20_02398 at 2530.103 kb on - strand, within MPMX20_02398 at 2530.114 kb on + strand, within MPMX20_02398 at 2530.114 kb on + strand, within MPMX20_02398 at 2530.114 kb on + strand, within MPMX20_02398 at 2530.114 kb on + strand, within MPMX20_02398 at 2530.114 kb on + strand, within MPMX20_02398 at 2530.114 kb on + strand, within MPMX20_02398 at 2530.114 kb on + strand, within MPMX20_02398 at 2530.122 kb on - strand, within MPMX20_02398 at 2530.122 kb on - strand, within MPMX20_02398 at 2530.140 kb on + strand, within MPMX20_02398 at 2530.141 kb on + strand, within MPMX20_02398 at 2530.148 kb on - strand, within MPMX20_02398 at 2530.148 kb on - strand, within MPMX20_02398 at 2530.159 kb on + strand, within MPMX20_02398 at 2530.196 kb on + strand, within MPMX20_02398 at 2530.202 kb on - strand, within MPMX20_02398 at 2530.209 kb on - strand, within MPMX20_02398 at 2530.273 kb on + strand, within MPMX20_02398 at 2530.281 kb on - strand, within MPMX20_02398 at 2530.283 kb on + strand, within MPMX20_02398 at 2530.336 kb on + strand, within MPMX20_02398 at 2530.336 kb on + strand, within MPMX20_02398 at 2530.432 kb on - strand, within MPMX20_02398 at 2530.432 kb on - strand, within MPMX20_02398 at 2530.515 kb on + strand, within MPMX20_02398 at 2530.523 kb on - strand, within MPMX20_02398 at 2530.558 kb on + strand, within MPMX20_02398 at 2530.566 kb on - strand, within MPMX20_02398 at 2530.598 kb on + strand, within MPMX20_02398 at 2530.598 kb on + strand, within MPMX20_02398 at 2530.601 kb on - strand, within MPMX20_02398 at 2530.601 kb on - strand, within MPMX20_02398 at 2530.634 kb on - strand, within MPMX20_02398 at 2530.676 kb on + strand, within MPMX20_02398 at 2530.705 kb on - strand, within MPMX20_02398 at 2530.729 kb on + strand at 2530.787 kb on + strand at 2530.795 kb on - strand at 2530.795 kb on - strand at 2530.893 kb on + strand, within MPMX20_02399 at 2530.901 kb on + strand, within MPMX20_02399 at 2530.946 kb on - strand, within MPMX20_02399 at 2531.018 kb on - strand, within MPMX20_02399 at 2531.028 kb on - strand, within MPMX20_02399 at 2531.099 kb on + strand, within MPMX20_02399 at 2531.123 kb on + strand, within MPMX20_02399 at 2531.131 kb on - strand, within MPMX20_02399 at 2531.193 kb on + strand, within MPMX20_02399 at 2531.196 kb on - strand, within MPMX20_02399 at 2531.199 kb on - strand, within MPMX20_02399 at 2531.199 kb on - strand, within MPMX20_02399 at 2531.201 kb on - strand, within MPMX20_02399 at 2531.359 kb on - strand at 2531.384 kb on + strand at 2531.384 kb on + strand at 2531.384 kb on + strand at 2531.393 kb on - strand at 2531.414 kb on - strand at 2531.414 kb on - strand at 2531.414 kb on - strand at 2531.414 kb on - strand at 2531.454 kb on + strand, within MPMX20_02400 at 2531.459 kb on + strand, within MPMX20_02400 at 2531.467 kb on - strand, within MPMX20_02400 at 2531.467 kb on - strand, within MPMX20_02400 at 2531.505 kb on - strand, within MPMX20_02400 at 2531.712 kb on - strand, within MPMX20_02400 at 2531.717 kb on + strand, within MPMX20_02400 at 2531.723 kb on + strand, within MPMX20_02400 at 2531.757 kb on - strand, within MPMX20_02400 at 2531.759 kb on + strand, within MPMX20_02400 at 2531.759 kb on + strand, within MPMX20_02400 at 2531.771 kb on + strand, within MPMX20_02400 at 2531.781 kb on + strand, within MPMX20_02400 at 2531.870 kb on + strand, within MPMX20_02400 at 2531.874 kb on + strand, within MPMX20_02400 at 2531.929 kb on + strand, within MPMX20_02400 at 2531.936 kb on + strand, within MPMX20_02400 at 2531.947 kb on + strand, within MPMX20_02400 at 2531.969 kb on + strand, within MPMX20_02400 at 2531.977 kb on - strand, within MPMX20_02400 at 2531.998 kb on + strand, within MPMX20_02400 at 2532.058 kb on + strand, within MPMX20_02400 at 2532.153 kb on + strand, within MPMX20_02400 at 2532.173 kb on + strand, within MPMX20_02400 at 2532.173 kb on + strand, within MPMX20_02400 at 2532.185 kb on + strand at 2532.187 kb on - strand at 2532.188 kb on - strand at 2532.284 kb on + strand at 2532.292 kb on - strand at 2532.317 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB plate, 1:1 coculture with Bacillus megaterium TBS_037 remove 2,529,877 - +0.5 2,529,882 - -0.1 2,529,911 - +0.2 2,529,914 + +0.7 2,529,917 - +1.2 2,529,934 + -0.6 2,529,997 - MPMX20_02398 0.12 -0.5 2,530,002 + MPMX20_02398 0.13 -1.6 2,530,004 + MPMX20_02398 0.13 -0.9 2,530,010 - MPMX20_02398 0.13 -0.4 2,530,036 - MPMX20_02398 0.16 +1.7 2,530,048 - MPMX20_02398 0.18 +1.2 2,530,095 + MPMX20_02398 0.23 -0.0 2,530,095 + MPMX20_02398 0.23 -0.2 2,530,103 - MPMX20_02398 0.24 +0.0 2,530,114 + MPMX20_02398 0.25 -1.1 2,530,114 + MPMX20_02398 0.25 -0.2 2,530,114 + MPMX20_02398 0.25 +0.2 2,530,114 + MPMX20_02398 0.25 -0.0 2,530,114 + MPMX20_02398 0.25 -0.2 2,530,114 + MPMX20_02398 0.25 +0.1 2,530,114 + MPMX20_02398 0.25 -0.5 2,530,122 - MPMX20_02398 0.26 -0.6 2,530,122 - MPMX20_02398 0.26 -1.9 2,530,140 + MPMX20_02398 0.28 -1.2 2,530,141 + MPMX20_02398 0.28 -1.8 2,530,148 - MPMX20_02398 0.28 -0.7 2,530,148 - MPMX20_02398 0.28 +0.2 2,530,159 + MPMX20_02398 0.30 -0.0 2,530,196 + MPMX20_02398 0.34 -1.2 2,530,202 - MPMX20_02398 0.34 +4.1 2,530,209 - MPMX20_02398 0.35 -0.3 2,530,273 + MPMX20_02398 0.42 -0.3 2,530,281 - MPMX20_02398 0.43 -0.0 2,530,283 + MPMX20_02398 0.43 -0.4 2,530,336 + MPMX20_02398 0.49 -0.1 2,530,336 + MPMX20_02398 0.49 +0.7 2,530,432 - MPMX20_02398 0.59 -0.3 2,530,432 - MPMX20_02398 0.59 +2.4 2,530,515 + MPMX20_02398 0.68 +0.3 2,530,523 - MPMX20_02398 0.69 -0.9 2,530,558 + MPMX20_02398 0.73 -0.8 2,530,566 - MPMX20_02398 0.73 -0.7 2,530,598 + MPMX20_02398 0.77 -0.3 2,530,598 + MPMX20_02398 0.77 +0.1 2,530,601 - MPMX20_02398 0.77 -0.7 2,530,601 - MPMX20_02398 0.77 +0.2 2,530,634 - MPMX20_02398 0.81 -0.1 2,530,676 + MPMX20_02398 0.85 -0.3 2,530,705 - MPMX20_02398 0.88 +1.0 2,530,729 + +1.3 2,530,787 + -2.3 2,530,795 - -0.6 2,530,795 - -0.3 2,530,893 + MPMX20_02399 0.14 -1.3 2,530,901 + MPMX20_02399 0.16 +0.3 2,530,946 - MPMX20_02399 0.25 -0.8 2,531,018 - MPMX20_02399 0.39 -0.4 2,531,028 - MPMX20_02399 0.41 -0.3 2,531,099 + MPMX20_02399 0.55 -1.0 2,531,123 + MPMX20_02399 0.59 -1.0 2,531,131 - MPMX20_02399 0.61 -1.4 2,531,193 + MPMX20_02399 0.73 -1.8 2,531,196 - MPMX20_02399 0.74 -1.5 2,531,199 - MPMX20_02399 0.74 -0.9 2,531,199 - MPMX20_02399 0.74 -0.4 2,531,201 - MPMX20_02399 0.75 -0.4 2,531,359 - +0.4 2,531,384 + +0.7 2,531,384 + +0.0 2,531,384 + +0.4 2,531,393 - -0.3 2,531,414 - +0.2 2,531,414 - +0.7 2,531,414 - -0.6 2,531,414 - +0.1 2,531,454 + MPMX20_02400 0.12 +0.3 2,531,459 + MPMX20_02400 0.13 -0.3 2,531,467 - MPMX20_02400 0.14 -0.4 2,531,467 - MPMX20_02400 0.14 -1.4 2,531,505 - MPMX20_02400 0.18 -2.0 2,531,712 - MPMX20_02400 0.40 +0.4 2,531,717 + MPMX20_02400 0.40 -0.1 2,531,723 + MPMX20_02400 0.41 +2.0 2,531,757 - MPMX20_02400 0.45 -1.5 2,531,759 + MPMX20_02400 0.45 -2.8 2,531,759 + MPMX20_02400 0.45 -0.6 2,531,771 + MPMX20_02400 0.46 -1.5 2,531,781 + MPMX20_02400 0.47 -2.6 2,531,870 + MPMX20_02400 0.57 +3.0 2,531,874 + MPMX20_02400 0.57 +0.3 2,531,929 + MPMX20_02400 0.63 -0.6 2,531,936 + MPMX20_02400 0.64 +1.5 2,531,947 + MPMX20_02400 0.65 +1.3 2,531,969 + MPMX20_02400 0.67 +1.0 2,531,977 - MPMX20_02400 0.68 -1.5 2,531,998 + MPMX20_02400 0.71 -0.2 2,532,058 + MPMX20_02400 0.77 +0.6 2,532,153 + MPMX20_02400 0.87 -0.0 2,532,173 + MPMX20_02400 0.89 +0.3 2,532,173 + MPMX20_02400 0.89 +0.8 2,532,185 + -0.6 2,532,187 - +0.0 2,532,188 - +1.0 2,532,284 + -0.5 2,532,292 - -0.3 2,532,317 + -0.1
Or see this region's nucleotide sequence